RNA–Protein interactions for RNA: YNL189W

SRP1, Transcript of Karyopherin alpha homolog, yeastyeast

Gene SRP1, Length 1,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP1YNL189W PAU3P25610 124 aa1.11□□□□□ -2.23
SRP1YNL189W RSM18P40033 138 aa1.11□□□□□ -2.23
SRP1YNL189W ICY1Q04329 127 aa1.11□□□□□ -2.23
SRP1YNL189W YLR194CQ05777 254 aa1.11□□□□□ -2.23
SRP1YNL189W POC4Q12245 148 aaPredicted RBP1.11□□□□□ -2.23
SRP1YNL189W ENV10Q99382 181 aa1.11□□□□□ -2.23
SRP1YNL189W DNA2P38859 1522 aa1.1□□□□□ -2.23
SRP1YNL189W MYO1P08964 1928 aa1.1□□□□□ -2.23
SRP1YNL189W SEC7P11075 2009 aaKnown RBP1.1□□□□□ -2.23
SRP1YNL189W SED1Q01589 338 aa1.1□□□□□ -2.23
SRP1YNL189W RPL33AP05744 107 aaKnown RBP1.09□□□□□ -2.23
SRP1YNL189W TOM6P33448 61 aa1.09□□□□□ -2.23
SRP1YNL189W PAU16P35994 123 aa1.09□□□□□ -2.23
SRP1YNL189W PAU15P40585 124 aa1.09□□□□□ -2.23
SRP1YNL189W LST8P41318 303 aa1.09□□□□□ -2.23
SRP1YNL189W CWP2P43497 92 aa1.09□□□□□ -2.23
SRP1YNL189W IMP2P46972 177 aa1.09□□□□□ -2.23
SRP1YNL189W RPL37BP51402 88 aaKnown RBP1.09□□□□□ -2.23
SRP1YNL189W YMR321CQ04898 105 aa1.09□□□□□ -2.23
SRP1YNL189W HPA2Q06592 156 aa1.09□□□□□ -2.23
SRP1YNL189W LCL2Q08045 131 aa1.09□□□□□ -2.23
SRP1YNL189W YCL048W-AQ2V2Q2 79 aa1.09□□□□□ -2.23
SRP1YNL189W ROX3P25046 220 aa1.08□□□□□ -2.24
SRP1YNL189W GCV3P39726 170 aaPredicted RBP1.08□□□□□ -2.24
SRP1YNL189W YMR122CQ03879 124 aa1.08□□□□□ -2.24
SRP1YNL189W YDR119W-AQ2V2P9 66 aa1.08□□□□□ -2.24
SRP1YNL189W SIN3P22579 1536 aa1.08□□□□□ -2.24
SRP1YNL189W TY4B-JP47024 1803 aa1.08□□□□□ -2.24
SRP1YNL189W POL1P13382 1468 aa1.08□□□□□ -2.24
SRP1YNL189W YBR013CP38215 129 aa1.07□□□□□ -2.24
SRP1YNL189W PAU5P43575 122 aa1.07□□□□□ -2.24
SRP1YNL189W ICS3P47034 131 aa1.07□□□□□ -2.24
SRP1YNL189W YOL118CQ08259 102 aa1.07□□□□□ -2.24
SRP1YNL189W LAA1P39526 2014 aa1.07□□□□□ -2.24
SRP1YNL189W XRN1P22147 1528 aaKnown RBP1.07□□□□□ -2.24
SRP1YNL189W CCW14O13547 238 aa1.07□□□□□ -2.24
SRP1YNL189W FAS2P19097 1887 aaKnown RBP1.07□□□□□ -2.24
SRP1YNL189W MRPL38P35996 138 aaPredicted RBP1.07□□□□□ -2.24
SRP1YNL189W SMC4Q12267 1418 aa1.06□□□□□ -2.24
SRP1YNL189W URB1P34241 1764 aaKnown RBP1.06□□□□□ -2.24
SRP1YNL189W RPL22AP05749 121 aaKnown RBP1.06□□□□□ -2.24
SRP1YNL189W LSM2P38203 95 aaKnown RBP1.06□□□□□ -2.24
SRP1YNL189W SWM2P40342 146 aa1.06□□□□□ -2.24
SRP1YNL189W YIL163CP40448 117 aa1.06□□□□□ -2.24
SRP1YNL189W VPS55P47111 140 aa1.06□□□□□ -2.24
SRP1YNL189W COA4Q05809 96 aa1.06□□□□□ -2.24
SRP1YNL189W TY1B-DR4Q07793 1604 aa1.06□□□□□ -2.24
SRP1YNL189W MMS22Q06164 1454 aa1.06□□□□□ -2.24
SRP1YNL189W DOP1Q03921 1698 aa1.06□□□□□ -2.24
SRP1YNL189W TCB3Q03640 1545 aaKnown RBP1.06□□□□□ -2.24
SRP1YNL189W TY1B-GR3Q12316 1755 aa1.05□□□□□ -2.24
SRP1YNL189W TY1B-ORQ92393 1755 aa1.05□□□□□ -2.24
SRP1YNL189W PAI3P01094 68 aa1.05□□□□□ -2.24
SRP1YNL189W YSF3P0C074 85 aaPredicted RBP1.05□□□□□ -2.24
SRP1YNL189W RPS22AP0C0W1 130 aaKnown RBP1.05□□□□□ -2.24
SRP1YNL189W YOL013W-AP0C272 63 aaPredicted RBP1.05□□□□□ -2.24
SRP1YNL189W YDR210WQ03482 75 aa1.05□□□□□ -2.24
SRP1YNL189W LSM6Q06406 86 aaKnown RBP1.05□□□□□ -2.24
SRP1YNL189W CCW12Q12127 133 aa1.05□□□□□ -2.24
SRP1YNL189W YLR285C-AQ3E771 56 aa1.05□□□□□ -2.24
SRP1YNL189W SCC2Q04002 1493 aa1.05□□□□□ -2.24
SRP1YNL189W TY1B-DR5P0C2I2 1755 aa1.05□□□□□ -2.24
SRP1YNL189W TY1B-DR6P0C2I3 1755 aa1.05□□□□□ -2.24
SRP1YNL189W TY1B-LR2P0C2I5 1755 aa1.05□□□□□ -2.24
SRP1YNL189W TY1B-LR3P0C2I6 1755 aaKnown RBP1.05□□□□□ -2.24
SRP1YNL189W TY1B-PR1P0C2I9 1755 aaKnown RBP1.05□□□□□ -2.24
SRP1YNL189W TY1B-PR3P0C2J1 1755 aaKnown RBP1.05□□□□□ -2.24
SRP1YNL189W TY1B-JR1P47098 1755 aa1.05□□□□□ -2.24
SRP1YNL189W TY1B-ML2Q03434 1755 aaKnown RBP1.05□□□□□ -2.24
SRP1YNL189W TY1B-ER1Q03612 1755 aa1.05□□□□□ -2.24
SRP1YNL189W TY1B-ML1Q04711 1755 aaKnown RBP1.05□□□□□ -2.24
SRP1YNL189W TY1B-GR2Q12269 1755 aa1.05□□□□□ -2.24
SRP1YNL189W TY1B-OLQ12273 1755 aa1.05□□□□□ -2.24
SRP1YNL189W TY1B-PLQ12414 1755 aaKnown RBP1.05□□□□□ -2.24
SRP1YNL189W YER188C-AP0C0V2 99 aa1.04□□□□□ -2.24
SRP1YNL189W YFR010W-AP0C5N0 62 aa1.04□□□□□ -2.24
SRP1YNL189W HMRA2P0CY13 119 aa1.04□□□□□ -2.24
SRP1YNL189W MRP17P28778 131 aa1.04□□□□□ -2.24
SRP1YNL189W MIC27P50945 234 aa1.04□□□□□ -2.24
SRP1YNL189W YOR343CQ12484 108 aa1.04□□□□□ -2.24
SRP1YNL189W YDR381C-AQ3E6R5 114 aa1.04□□□□□ -2.24
SRP1YNL189W PDR12Q02785 1511 aa1.04□□□□□ -2.24
SRP1YNL189W MLP1Q02455 1875 aaKnown RBP1.04□□□□□ -2.24
SRP1YNL189W YHR214C-DP0CX93 97 aa1.04□□□□□ -2.24
SRP1YNL189W MRX7P53869 86 aa1.04□□□□□ -2.24
SRP1YNL189W IRC21Q04772 201 aa1.04□□□□□ -2.24
SRP1YNL189W YCR095W-AQ3E787 52 aa1.04□□□□□ -2.24
SRP1YNL189W YPL038W-AQ3E7B4 63 aa1.04□□□□□ -2.24
SRP1YNL189W ECM29P38737 1868 aa1.04□□□□□ -2.24
SRP1YNL189W NTE1Q04958 1679 aa1.03□□□□□ -2.24
SRP1YNL189W YGL041C-BQ3E750 60 aa1.03□□□□□ -2.24
SRP1YNL189W RPS22BQ3E7Y3 130 aaKnown RBP1.03□□□□□ -2.24
SRP1YNL189W SRB8P25648 1427 aa1.02□□□□□ -2.25
SRP1YNL189W HFA1P32874 2273 aa1.02□□□□□ -2.25
SRP1YNL189W YAL065CO13511 128 aa1.02□□□□□ -2.25
SRP1YNL189W NHP2P32495 156 aaPredicted RBP1.02□□□□□ -2.25
SRP1YNL189W YJL009WP47078 108 aa1.02□□□□□ -2.25
SRP1YNL189W MRPS12P53732 153 aa1.02□□□□□ -2.25
SRP1YNL189W COX12Q01519 83 aa1.02□□□□□ -2.25
SRP1YNL189W YOR314WQ12506 109 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms