RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	GRH1	Q04410	372 aa	Known RBP	2.57	□□□□□ -2
TPM1	YNL079C	DPP1	Q05521	289 aa		2.57	□□□□□ -2
TPM1	YNL079C	RRG8	Q06109	277 aa		2.57	□□□□□ -2
TPM1	YNL079C	PRM3	Q08931	133 aa		2.57	□□□□□ -2
TPM1	YNL079C	YDL157C	Q12082	118 aa		2.57	□□□□□ -2
TPM1	YNL079C	CCW12	Q12127	133 aa		2.57	□□□□□ -2
TPM1	YNL079C	YLR050C	Q12155	161 aa	Known RBP	2.57	□□□□□ -2
TPM1	YNL079C	MRPL23	Q12487	163 aa	Predicted RBP	2.57	□□□□□ -2
TPM1	YNL079C	YOR011W-A	Q3E807	68 aa		2.57	□□□□□ -2
TPM1	YNL079C	CCW14	O13547	238 aa		2.56	□□□□□ -2
TPM1	YNL079C	VAR1	P02381	398 aa		2.56	□□□□□ -2
TPM1	YNL079C	COX10	P21592	462 aa		2.56	□□□□□ -2
TPM1	YNL079C	YCR023C	P25351	611 aa		2.56	□□□□□ -2
TPM1	YNL079C	MIG1	P27705	504 aa		2.56	□□□□□ -2
TPM1	YNL079C	FYV4	P38783	130 aa	Predicted RBP	2.56	□□□□□ -2
TPM1	YNL079C	YER076C	P40049	302 aa		2.56	□□□□□ -2
TPM1	YNL079C	MSL1	P40567	111 aa	Predicted RBP	2.56	□□□□□ -2
TPM1	YNL079C	GLC8	P41818	229 aa		2.56	□□□□□ -2
TPM1	YNL079C	FIP1	P45976	327 aa		2.56	□□□□□ -2
TPM1	YNL079C	CWC27	Q02770	301 aa		2.56	□□□□□ -2
TPM1	YNL079C	MGR2	Q02889	113 aa		2.56	□□□□□ -2
TPM1	YNL079C	YMR244W	Q04018	355 aa		2.56	□□□□□ -2
TPM1	YNL079C	TVP18	Q04767	167 aa		2.56	□□□□□ -2
TPM1	YNL079C	PAU23	Q07987	124 aa		2.56	□□□□□ -2
TPM1	YNL079C	PAU17	Q12370	124 aa		2.56	□□□□□ -2
TPM1	YNL079C	YPR014C	Q6B0W2	109 aa		2.56	□□□□□ -2
TPM1	YNL079C	PFY1	P07274	126 aa		2.55	□□□□□ -2
TPM1	YNL079C	RPL27B	P0C2H7	136 aa	Known RBP	2.55	□□□□□ -2
TPM1	YNL079C	RPL31A	P0C2H8	113 aa	Known RBP	2.55	□□□□□ -2
TPM1	YNL079C	PRE1	P22141	198 aa	Known RBP	2.55	□□□□□ -2
TPM1	YNL079C	APS1	P35181	156 aa		2.55	□□□□□ -2
TPM1	YNL079C	YER135C	P40082	130 aa		2.55	□□□□□ -2
TPM1	YNL079C	YPL080C	Q02826	108 aa		2.55	□□□□□ -2
TPM1	YNL079C	YDR042C	Q03205	200 aa		2.55	□□□□□ -2
TPM1	YNL079C	FCF1	Q05498	189 aa	Predicted RBP	2.55	□□□□□ -2
TPM1	YNL079C	YBR200W-A	Q3E755	54 aa		2.55	□□□□□ -2
TPM1	YNL079C	SCS22	Q6Q595	175 aa		2.55	□□□□□ -2
TPM1	YNL079C	TAR1	Q8TGM6	124 aa		2.55	□□□□□ -2
TPM1	YNL079C	Q0255	P03881	472 aa		2.54	□□□□□ -2
TPM1	YNL079C	YHR212W-A	P0CX91	67 aa		2.54	□□□□□ -2
TPM1	YNL079C	YCL042W	P25572	119 aa		2.54	□□□□□ -2
TPM1	YNL079C	UTR5	P32630	166 aa		2.54	□□□□□ -2
TPM1	YNL079C	TOS6	P48560	102 aa		2.54	□□□□□ -2
TPM1	YNL079C	MIC26	P50087	233 aa		2.54	□□□□□ -2
TPM1	YNL079C	YDR366C	P87287	132 aa		2.54	□□□□□ -2
TPM1	YNL079C	VPS71	Q03433	280 aa		2.54	□□□□□ -2
TPM1	YNL079C	MRPS8	Q03799	155 aa		2.54	□□□□□ -2
TPM1	YNL079C	ECM19	Q06011	112 aa		2.54	□□□□□ -2
TPM1	YNL079C	DFM1	Q12743	341 aa	Known RBP	2.54	□□□□□ -2
TPM1	YNL079C	URA2	P07259	2214 aa	Known RBP	2.53	□□□□□ -2
TPM1	YNL079C	HAP3	P13434	144 aa		2.53	□□□□□ -2
TPM1	YNL079C	RPL16B	P26785	198 aa	Known RBP	2.53	□□□□□ -2
TPM1	YNL079C	YKL044W	P36092	106 aa		2.53	□□□□□ -2
TPM1	YNL079C	PRY2	P36110	329 aa		2.53	□□□□□ -2
TPM1	YNL079C	ALG13	P53178	202 aa		2.53	□□□□□ -2
TPM1	YNL079C	YMR103C	Q04436	120 aa		2.53	□□□□□ -2
TPM1	YNL079C	DGA1	Q08650	418 aa		2.53	□□□□□ -2
TPM1	YNL079C	HMRA2	P0CY13	119 aa		2.52	□□□□□ -2.01
TPM1	YNL079C	YKR070W	P36151	352 aa	Known RBP	2.52	□□□□□ -2.01
TPM1	YNL079C	AIM29	P36154	155 aa		2.52	□□□□□ -2.01
TPM1	YNL079C	ECM33	P38248	429 aa	Known RBP	2.52	□□□□□ -2.01
TPM1	YNL079C	MPC2	P38857	129 aa		2.52	□□□□□ -2.01
TPM1	YNL079C	DCV1	P43595	202 aa		2.52	□□□□□ -2.01
TPM1	YNL079C	YFR035C	P43608	114 aa		2.52	□□□□□ -2.01
TPM1	YNL079C	AIM34	Q03673	198 aa		2.52	□□□□□ -2.01
TPM1	YNL079C	COA3	Q3E7B2	85 aa		2.52	□□□□□ -2.01
TPM1	YNL079C	RPL2A	P0CX45	254 aa	Known RBP	2.51	□□□□□ -2.01
TPM1	YNL079C	RPL2B	P0CX46	254 aa	Known RBP	2.51	□□□□□ -2.01
TPM1	YNL079C	YKL070W	P36087	169 aa		2.51	□□□□□ -2.01
TPM1	YNL079C	SMD1	Q02260	146 aa	Predicted RBP	2.51	□□□□□ -2.01
TPM1	YNL079C	RUB1	Q03919	77 aa		2.51	□□□□□ -2.01
TPM1	YNL079C	YLR042C	Q07990	161 aa		2.51	□□□□□ -2.01
TPM1	YNL079C	MSA1	Q08471	629 aa		2.51	□□□□□ -2.01
TPM1	YNL079C	YOR097C	Q12274	175 aa	Predicted RBP	2.51	□□□□□ -2.01
TPM1	YNL079C	YLR363W-A	Q3E747	85 aa		2.51	□□□□□ -2.01
TPM1	YNL079C	YOR008C-A	Q3E7B9	74 aa		2.51	□□□□□ -2.01
TPM1	YNL079C	YGR035W-A	Q45U48	73 aa		2.51	□□□□□ -2.01
TPM1	YNL079C	RPS11A	P0CX47	156 aa	Known RBP	2.5	□□□□□ -2.01
TPM1	YNL079C	RPS11B	P0CX48	156 aa	Known RBP	2.5	□□□□□ -2.01
TPM1	YNL079C	MRP49	P32388	137 aa		2.5	□□□□□ -2.01
TPM1	YNL079C	YPL073C	P40323	161 aa		2.5	□□□□□ -2.01
TPM1	YNL079C	YJR146W	P47174	117 aa		2.5	□□□□□ -2.01
TPM1	YNL079C	YML079W	Q03629	201 aa		2.5	□□□□□ -2.01
TPM1	YNL079C	YPR170W-B	P0C5R9	85 aa		2.49	□□□□□ -2.01
TPM1	YNL079C	YDR274C	P87283	123 aa		2.49	□□□□□ -2.01
TPM1	YNL079C	YPL261C	Q08976	102 aa		2.49	□□□□□ -2.01
TPM1	YNL079C	MBF1	O14467	151 aa	Known RBP	2.48	□□□□□ -2.01
TPM1	YNL079C	YDL022C-A	P0C5L6	82 aa		2.48	□□□□□ -2.01
TPM1	YNL079C	RPF1	P38805	295 aa	Known RBP	2.48	□□□□□ -2.01
TPM1	YNL079C	YNL217W	P40152	326 aa		2.48	□□□□□ -2.01
TPM1	YNL079C	AIM11	P87275	137 aa		2.48	□□□□□ -2.01
TPM1	YNL079C	YPR195C	Q06594	109 aa		2.48	□□□□□ -2.01
TPM1	YNL079C	UBC5	P15732	148 aa		2.47	□□□□□ -2.01
TPM1	YNL079C	ATP15	P21306	62 aa		2.47	□□□□□ -2.01
TPM1	YNL079C	YKR041W	P36134	250 aa		2.47	□□□□□ -2.01
TPM1	YNL079C	YBR209W	P38311	105 aa		2.47	□□□□□ -2.01
TPM1	YNL079C	YEL067C	P39978	195 aa		2.47	□□□□□ -2.01
TPM1	YNL079C	YNR077C	P53758	84 aa		2.47	□□□□□ -2.01
TPM1	YNL079C	PMP3	P87284	55 aa		2.47	□□□□□ -2.01
TPM1	YNL079C	ELC1	Q03071	99 aa		2.47	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms