RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W YNL234WP53857 426 aa1.39□□□□□ -2.19
RTP1YMR185W YNL184CP53876 108 aa1.39□□□□□ -2.19
RTP1YMR185W YMR181CQ03231 154 aa1.39□□□□□ -2.19
RTP1YMR185W YTH1Q06102 208 aaPredicted RBP1.39□□□□□ -2.19
RTP1YMR185W YDL009CQ12210 107 aa1.39□□□□□ -2.19
RTP1YMR185W YDR381C-AQ3E6R5 114 aa1.39□□□□□ -2.19
RTP1YMR185W YBR200W-AQ3E755 54 aa1.39□□□□□ -2.19
RTP1YMR185W YNL146C-AQ3E7Z1 64 aa1.39□□□□□ -2.19
RTP1YMR185W SEC16P48415 2195 aaKnown RBP1.39□□□□□ -2.19
RTP1YMR185W RAD6P06104 172 aa1.39□□□□□ -2.19
RTP1YMR185W QCR8P08525 94 aa1.39□□□□□ -2.19
RTP1YMR185W YHR022CP38763 256 aa1.39□□□□□ -2.19
RTP1YMR185W DCV1P43595 202 aa1.39□□□□□ -2.19
RTP1YMR185W YFR057WP43625 151 aa1.39□□□□□ -2.19
RTP1YMR185W SKI6P46948 246 aaPredicted RBP1.39□□□□□ -2.19
RTP1YMR185W ABF2Q02486 183 aa1.39□□□□□ -2.19
RTP1YMR185W PBP4Q07362 185 aaKnown RBP1.39□□□□□ -2.19
RTP1YMR185W UGX2P32772 223 aa1.38□□□□□ -2.19
RTP1YMR185W YAR029WP39549 74 aa1.38□□□□□ -2.19
RTP1YMR185W VTC1P40046 129 aaRIP-Chip data1.38□□□□□ -2.19not detected
RTP1YMR185W YCH1P42937 148 aa1.38□□□□□ -2.19
RTP1YMR185W FIP1P45976 327 aa1.38□□□□□ -2.19
RTP1YMR185W SBH2P52871 88 aa1.38□□□□□ -2.19
RTP1YMR185W YBR182C-AQ8TGU6 64 aa1.38□□□□□ -2.19
RTP1YMR185W MSA2P36157 363 aa1.38□□□□□ -2.19
RTP1YMR185W MRPL24P36525 258 aaPredicted RBP1.38□□□□□ -2.19
RTP1YMR185W NRG2P38082 220 aa1.38□□□□□ -2.19
RTP1YMR185W CTR2P38865 189 aa1.38□□□□□ -2.19
RTP1YMR185W YER085CP40058 173 aa1.38□□□□□ -2.19
RTP1YMR185W YIA6P40556 373 aa1.38□□□□□ -2.19
RTP1YMR185W COX17Q12287 69 aa1.38□□□□□ -2.19
RTP1YMR185W SEN1Q00416 2231 aaKnown RBP1.37□□□□□ -2.19
RTP1YMR185W ACC1Q00955 2233 aaKnown RBP1.37□□□□□ -2.19
RTP1YMR185W SHU1P38751 150 aa1.37□□□□□ -2.19
RTP1YMR185W KEG1P43614 200 aa1.37□□□□□ -2.19
RTP1YMR185W YDR119W-AQ2V2P9 66 aa1.37□□□□□ -2.19
RTP1YMR185W YCL048W-AQ2V2Q2 79 aa1.37□□□□□ -2.19
RTP1YMR185W YOR020W-AQ3E824 90 aa1.37□□□□□ -2.19
RTP1YMR185W BEM2P39960 2167 aaKnown RBP1.37□□□□□ -2.19
RTP1YMR185W ATP15P21306 62 aa1.37□□□□□ -2.19
RTP1YMR185W RPL16AP26784 199 aaKnown RBP1.37□□□□□ -2.19
RTP1YMR185W INO2P26798 304 aa1.37□□□□□ -2.19
RTP1YMR185W MID2P36027 376 aa1.37□□□□□ -2.19
RTP1YMR185W YER121WP40076 114 aa1.37□□□□□ -2.19
RTP1YMR185W AIM19P40502 157 aa1.37□□□□□ -2.19
RTP1YMR185W YCL021W-AQ96VH3 125 aa1.37□□□□□ -2.19
RTP1YMR185W ENV10Q99382 181 aa1.37□□□□□ -2.19
RTP1YMR185W TOM6P33448 61 aa1.36□□□□□ -2.19
RTP1YMR185W YHL042WP38729 150 aa1.36□□□□□ -2.19
RTP1YMR185W MPC2P38857 129 aa1.36□□□□□ -2.19
RTP1YMR185W YPL038W-AQ3E7B4 63 aa1.36□□□□□ -2.19
RTP1YMR185W POL2P21951 2222 aaKnown RBP1.36□□□□□ -2.19
RTP1YMR185W YHR139C-AO13536 103 aa1.36□□□□□ -2.19
RTP1YMR185W SIM1P40472 476 aa1.36□□□□□ -2.19
RTP1YMR185W YLR236CA0A023PZG4 107 aa1.36□□□□□ -2.19
RTP1YMR185W RPL28P02406 149 aaKnown RBP1.36□□□□□ -2.19
RTP1YMR185W RPL16BP26785 198 aaKnown RBP1.36□□□□□ -2.19
RTP1YMR185W VMA11P32842 164 aa1.36□□□□□ -2.19
RTP1YMR185W SMP1P38128 452 aa1.36□□□□□ -2.19
RTP1YMR185W SVP26P38869 228 aa1.36□□□□□ -2.19
RTP1YMR185W RRT13P40042 185 aa1.36□□□□□ -2.19
RTP1YMR185W RGM1Q00453 211 aa1.36□□□□□ -2.19
RTP1YMR185W YPL278CQ08990 100 aa1.36□□□□□ -2.19
RTP1YMR185W PRM7Q12459 698 aa1.36□□□□□ -2.19
RTP1YMR185W TOM1Q03280 3268 aa1.35□□□□□ -2.19
RTP1YMR185W UBC5P15732 148 aa1.35□□□□□ -2.19
RTP1YMR185W GAT4P40569 121 aa1.35□□□□□ -2.19
RTP1YMR185W RPR2P40571 144 aa1.35□□□□□ -2.19
RTP1YMR185W YIR020CP40575 100 aa1.35□□□□□ -2.19
RTP1YMR185W WWM1P43582 211 aaKnown RBP1.35□□□□□ -2.19
RTP1YMR185W HUR1P45820 110 aa1.35□□□□□ -2.19
RTP1YMR185W VPS55P47111 140 aa1.35□□□□□ -2.19
RTP1YMR185W MRPS8Q03799 155 aa1.35□□□□□ -2.19
RTP1YMR185W YLR042CQ07990 161 aa1.35□□□□□ -2.19
RTP1YMR185W PPT2Q12036 173 aa1.35□□□□□ -2.19
RTP1YMR185W YPR013CQ12145 317 aa1.35□□□□□ -2.19
RTP1YMR185W STF1P01098 86 aa1.35□□□□□ -2.19
RTP1YMR185W RPL18AP0CX49 186 aaKnown RBP1.35□□□□□ -2.19
RTP1YMR185W RPL18BP0CX50 186 aaKnown RBP1.35□□□□□ -2.19
RTP1YMR185W TOA2P32774 122 aa1.35□□□□□ -2.19
RTP1YMR185W DSE2P38844 325 aa1.35□□□□□ -2.19
RTP1YMR185W COX14P39103 70 aa1.35□□□□□ -2.19
RTP1YMR185W YEL008WP40001 126 aa1.35□□□□□ -2.19
RTP1YMR185W ARC15P40518 154 aaRIP-Chip data1.35□□□□□ -2.19not detected
RTP1YMR185W YMR244WQ04018 355 aa1.35□□□□□ -2.19
RTP1YMR185W HOR7Q05827 59 aa1.35□□□□□ -2.19
RTP1YMR185W YLR361C-AQ3E795 98 aa1.35□□□□□ -2.19
RTP1YMR185W YER135CP40082 130 aa1.34□□□□□ -2.19
RTP1YMR185W CWP2P43497 92 aa1.34□□□□□ -2.19
RTP1YMR185W YGR025WP53216 100 aa1.34□□□□□ -2.19
RTP1YMR185W CAX4P53223 239 aa1.34□□□□□ -2.19
RTP1YMR185W YNL190WP53872 204 aa1.34□□□□□ -2.19
RTP1YMR185W YDL241WQ07738 123 aa1.34□□□□□ -2.19
RTP1YMR185W SPO24Q3E752 67 aa1.34□□□□□ -2.19
RTP1YMR185W YOL085CQ99345 113 aa1.34□□□□□ -2.19
RTP1YMR185W YPL229WQ99395 206 aa1.34□□□□□ -2.19
RTP1YMR185W ECM12O13529 151 aa1.34□□□□□ -2.2
RTP1YMR185W RPL29P05747 59 aaPredicted RBP1.34□□□□□ -2.2
RTP1YMR185W PBI2P0CT04 75 aaKnown RBP1.34□□□□□ -2.2
RTP1YMR185W RPS11AP0CX47 156 aaKnown RBP1.34□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms