RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C Q0144Q9ZZW2 109 aa-1.36□□□□□ -2.63
VPS20YMR077C YHR130CP38834 111 aa-1.37□□□□□ -2.63
VPS20YMR077C SNF11P38956 169 aa-1.37□□□□□ -2.63
VPS20YMR077C PAM16P42949 149 aa-1.37□□□□□ -2.63
VPS20YMR077C YOL118CQ08259 102 aa-1.37□□□□□ -2.63
VPS20YMR077C YOR097CQ12274 175 aaPredicted RBP-1.37□□□□□ -2.63
VPS20YMR077C SNN1P48232 102 aa-1.38□□□□□ -2.63
VPS20YMR077C AIM11P87275 137 aa-1.38□□□□□ -2.63
VPS20YMR077C COX12Q01519 83 aa-1.38□□□□□ -2.63
VPS20YMR077C YDR210WQ03482 75 aa-1.38□□□□□ -2.63
VPS20YMR077C LSM6Q06406 86 aaKnown RBP-1.38□□□□□ -2.63
VPS20YMR077C PDX3P38075 228 aaKnown RBP-1.39□□□□□ -2.63
VPS20YMR077C POP7P38291 140 aa-1.39□□□□□ -2.63
VPS20YMR077C YBR292CP38357 123 aa-1.39□□□□□ -2.63
VPS20YMR077C RPL38P49167 78 aaKnown RBP-1.39□□□□□ -2.63
VPS20YMR077C YPL038W-AQ3E7B4 63 aa-1.39□□□□□ -2.63
VPS20YMR077C MRPL38P35996 138 aaPredicted RBP-1.4□□□□□ -2.63
VPS20YMR077C SFT1P43682 97 aa-1.4□□□□□ -2.63
VPS20YMR077C SSN2P38931 1420 aa-1.4□□□□□ -2.63
VPS20YMR077C PAU24P38155 120 aa-1.41□□□□□ -2.64
VPS20YMR077C HKR1P41809 1802 aa-1.41□□□□□ -2.64
VPS20YMR077C YER187WP40102 141 aa-1.42□□□□□ -2.64
VPS20YMR077C RSM18P40033 138 aa-1.43□□□□□ -2.64
VPS20YMR077C MRX7P53869 86 aa-1.43□□□□□ -2.64
VPS20YMR077C ICY1Q04329 127 aa-1.43□□□□□ -2.64
VPS20YMR077C DAD1Q12248 94 aa-1.43□□□□□ -2.64
VPS20YMR077C BPH1P25356 2167 aa-1.44□□□□□ -2.64
VPS20YMR077C YHR138CP38841 114 aaPredicted RBP-1.44□□□□□ -2.64
VPS20YMR077C GIM4P40005 111 aaKnown RBP-1.44□□□□□ -2.64
VPS20YMR077C YGL204CP53089 101 aa-1.44□□□□□ -2.64
VPS20YMR077C YHR050W-AQ05451 56 aa-1.44□□□□□ -2.64
VPS20YMR077C CSN9Q03981 162 aa-1.45□□□□□ -2.64
VPS20YMR077C YLR118CQ12354 227 aa-1.45□□□□□ -2.64
VPS20YMR077C YRF1-1P0CX20 1796 aa-1.46□□□□□ -2.64
VPS20YMR077C YRF1-5P0CX21 1796 aa-1.46□□□□□ -2.64
VPS20YMR077C YRF1-8P0CX22 1796 aa-1.46□□□□□ -2.64
VPS20YMR077C PAU2P32612 120 aa-1.46□□□□□ -2.64
VPS20YMR077C TDA2P40045 126 aa-1.46□□□□□ -2.64
VPS20YMR077C GTT1P40582 234 aa-1.46□□□□□ -2.64
VPS20YMR077C SAE3P89114 91 aa-1.46□□□□□ -2.64
VPS20YMR077C BUD4P47136 1447 aa-1.47□□□□□ -2.64
VPS20YMR077C MRP17P28778 131 aa-1.47□□□□□ -2.64
VPS20YMR077C RPS20P38701 121 aaKnown RBP-1.47□□□□□ -2.64
VPS20YMR077C SPC24Q04477 213 aa-1.48□□□□□ -2.65
VPS20YMR077C NTE1Q04958 1679 aa-1.48□□□□□ -2.65
VPS20YMR077C SRB8P25648 1427 aa-1.49□□□□□ -2.65
VPS20YMR077C PAU19P0CE85 124 aa-1.49□□□□□ -2.65
VPS20YMR077C COX7P10174 60 aa-1.49□□□□□ -2.65
VPS20YMR077C PAU3P25610 124 aa-1.49□□□□□ -2.65
VPS20YMR077C YCR099CP25657 155 aa-1.49□□□□□ -2.65
VPS20YMR077C MIX14Q04341 121 aa-1.49□□□□□ -2.65
VPS20YMR077C YLR361C-AQ3E795 98 aa-1.49□□□□□ -2.65
VPS20YMR077C YLR419WQ06698 1435 aaKnown RBP-1.49□□□□□ -2.65
VPS20YMR077C ECM12O13529 151 aa-1.5□□□□□ -2.65
VPS20YMR077C PAU20Q08322 120 aa-1.5□□□□□ -2.65
VPS20YMR077C MYO2P19524 1574 aaKnown RBP-1.51□□□□□ -2.65
VPS20YMR077C SRB6P32570 121 aa-1.52□□□□□ -2.65
VPS20YMR077C PAU15P40585 124 aa-1.52□□□□□ -2.65
VPS20YMR077C SMD2Q06217 110 aaKnown RBP-1.52□□□□□ -2.65
VPS20YMR077C YIR021W-AQ3E739 70 aa-1.52□□□□□ -2.65
VPS20YMR077C YMR001C-AQ8TGS9 76 aa-1.52□□□□□ -2.65
VPS20YMR077C CUP1-1P0CX80 61 aa-1.53□□□□□ -2.65
VPS20YMR077C CUP1-2P0CX81 61 aa-1.53□□□□□ -2.65
VPS20YMR077C YDR278CQ05612 105 aa-1.53□□□□□ -2.65
VPS20YMR077C TY1B-BRQ12193 1756 aa-1.53□□□□□ -2.65
VPS20YMR077C MIC10Q96VH5 97 aa-1.53□□□□□ -2.65
VPS20YMR077C SNA2P56508 79 aa-1.55□□□□□ -2.66
VPS20YMR077C TIM8P57744 87 aa-1.55□□□□□ -2.66
VPS20YMR077C MMS1Q06211 1407 aa-1.56□□□□□ -2.66
VPS20YMR077C RGI1P40043 161 aaPredicted RBP-1.56□□□□□ -2.66
VPS20YMR077C YNR034W-AQ3E841 98 aa-1.56□□□□□ -2.66
VPS20YMR077C YLR365WQ7LIF2 110 aa-1.56□□□□□ -2.66
VPS20YMR077C PAU16P35994 123 aa-1.57□□□□□ -2.66
VPS20YMR077C YBL044WP38194 122 aa-1.57□□□□□ -2.66
VPS20YMR077C AIM19P40502 157 aa-1.57□□□□□ -2.66
VPS20YMR077C VMA21P41806 77 aa-1.58□□□□□ -2.66
VPS20YMR077C YCR095W-AQ3E787 52 aa-1.58□□□□□ -2.66
VPS20YMR077C BPT1P14772 1559 aa-1.59□□□□□ -2.66
VPS20YMR077C HUR1P45820 110 aa-1.59□□□□□ -2.66
VPS20YMR077C YNL042W-BQ3E7Z2 85 aa-1.59□□□□□ -2.66
VPS20YMR077C Q0032Q9ZZX7 96 aa-1.59□□□□□ -2.66
VPS20YMR077C TY1B-PR2P0C2J0 1756 aa-1.59□□□□□ -2.66
VPS20YMR077C SWC7Q06707 132 aa-1.6□□□□□ -2.67
VPS20YMR077C DNF3Q12674 1656 aa-1.61□□□□□ -2.67
VPS20YMR077C PAU1P0CE88 120 aa-1.61□□□□□ -2.67
VPS20YMR077C PAU14P0CE89 120 aa-1.61□□□□□ -2.67
VPS20YMR077C PAU6P0CE90 120 aa-1.61□□□□□ -2.67
VPS20YMR077C PAU18P0CE91 120 aa-1.61□□□□□ -2.67
VPS20YMR077C PAU8P0CE92 120 aa-1.61□□□□□ -2.67
VPS20YMR077C PAU11P0CE93 120 aa-1.61□□□□□ -2.67
VPS20YMR077C PAU13P38725 120 aa-1.61□□□□□ -2.67
VPS20YMR077C EDC1P53080 175 aaPredicted RBP-1.61□□□□□ -2.67
VPS20YMR077C PAU10Q03050 120 aa-1.61□□□□□ -2.67
VPS20YMR077C PAU9Q3E770 120 aa-1.61□□□□□ -2.67
VPS20YMR077C TY1B-DR5P0C2I2 1755 aa-1.62□□□□□ -2.67
VPS20YMR077C TY1B-DR6P0C2I3 1755 aa-1.62□□□□□ -2.67
VPS20YMR077C TY1B-LR2P0C2I5 1755 aa-1.62□□□□□ -2.67
VPS20YMR077C TY1B-PR1P0C2I9 1755 aaKnown RBP-1.62□□□□□ -2.67
VPS20YMR077C TY1B-JR1P47098 1755 aa-1.62□□□□□ -2.67
VPS20YMR077C TY1B-JR2P47100 1755 aaKnown RBP-1.62□□□□□ -2.67
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms