RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C DIE2P50076 525 aa0.22□□□□□ -2.37
UBX4YMR067C YGL204CP53089 101 aa0.22□□□□□ -2.37
UBX4YMR067C YGR025WP53216 100 aa0.22□□□□□ -2.37
UBX4YMR067C YNL019CP53975 284 aa0.22□□□□□ -2.37
UBX4YMR067C SNA2P56508 79 aa0.22□□□□□ -2.37
UBX4YMR067C MRPS17Q03246 237 aaPredicted RBP0.22□□□□□ -2.37
UBX4YMR067C GPI11Q06636 219 aa0.22□□□□□ -2.37
UBX4YMR067C HRD1Q08109 551 aa0.22□□□□□ -2.37
UBX4YMR067C YPR108W-AQ3E7B3 70 aa0.22□□□□□ -2.37
UBX4YMR067C YPR014CQ6B0W2 109 aa0.22□□□□□ -2.37
UBX4YMR067C YLR365WQ7LIF2 110 aa0.22□□□□□ -2.37
UBX4YMR067C IGO2Q9P305 131 aa0.22□□□□□ -2.37
UBX4YMR067C COX9P07255 59 aa0.21□□□□□ -2.38
UBX4YMR067C YHR213WP0CI67 198 aa0.21□□□□□ -2.38
UBX4YMR067C TRR1P29509 319 aaKnown RBP0.21□□□□□ -2.38
UBX4YMR067C EMP24P32803 203 aaKnown RBP0.21□□□□□ -2.38
UBX4YMR067C RPL14AP36105 138 aaKnown RBP0.21□□□□□ -2.38
UBX4YMR067C YBR032WP38223 100 aa0.21□□□□□ -2.38
UBX4YMR067C CSH1P38287 376 aa0.21□□□□□ -2.38
UBX4YMR067C RPL14BP38754 138 aaKnown RBP0.21□□□□□ -2.38
UBX4YMR067C HTD2P38790 280 aaKnown RBP0.21□□□□□ -2.38
UBX4YMR067C ORM1P53224 222 aa0.21□□□□□ -2.38
UBX4YMR067C YGR042WP53227 271 aa0.21□□□□□ -2.38
UBX4YMR067C ERI1P62651 68 aaKnown RBP0.21□□□□□ -2.38
UBX4YMR067C TLG1Q03322 224 aa0.21□□□□□ -2.38
UBX4YMR067C THI74Q04083 370 aa0.21□□□□□ -2.38
UBX4YMR067C SDH7Q04401 133 aa0.21□□□□□ -2.38
UBX4YMR067C YMR320WQ04897 101 aa0.21□□□□□ -2.38
UBX4YMR067C YLR194CQ05777 254 aa0.21□□□□□ -2.38
UBX4YMR067C NMA1Q06178 401 aaKnown RBP0.21□□□□□ -2.38
UBX4YMR067C RRT7Q07829 113 aa0.21□□□□□ -2.38
UBX4YMR067C YPR145C-AQ2V2P0 78 aa0.21□□□□□ -2.38
UBX4YMR067C YGL258W-AQ3E740 77 aa0.21□□□□□ -2.38
UBX4YMR067C YOR381W-AQ3E804 55 aa0.21□□□□□ -2.38
UBX4YMR067C HUG1Q6Q5K6 68 aa0.21□□□□□ -2.38
UBX4YMR067C KSH1Q8TGJ3 72 aa0.21□□□□□ -2.38
UBX4YMR067C ECM12O13529 151 aa0.2□□□□□ -2.38
UBX4YMR067C ARG80P07249 177 aa0.2□□□□□ -2.38
UBX4YMR067C FPR2P32472 135 aa0.2□□□□□ -2.38
UBX4YMR067C PAU2P32612 120 aa0.2□□□□□ -2.38
UBX4YMR067C PAU24P38155 120 aa0.2□□□□□ -2.38
UBX4YMR067C YAL064WP39711 94 aa0.2□□□□□ -2.38
UBX4YMR067C CIN5P40917 295 aa0.2□□□□□ -2.38
UBX4YMR067C IMP2P46972 177 aa0.2□□□□□ -2.38
UBX4YMR067C BRP1P53194 125 aa0.2□□□□□ -2.38
UBX4YMR067C PAU12P53343 120 aa0.2□□□□□ -2.38
UBX4YMR067C PMP3P87284 55 aa0.2□□□□□ -2.38
UBX4YMR067C YDR366CP87287 132 aa0.2□□□□□ -2.38
UBX4YMR067C DYN2Q02647 92 aa0.2□□□□□ -2.38
UBX4YMR067C EST3Q03096 181 aa0.2□□□□□ -2.38
UBX4YMR067C AIM34Q03673 198 aa0.2□□□□□ -2.38
UBX4YMR067C FRQ1Q06389 190 aa0.2□□□□□ -2.38
UBX4YMR067C YGL041C-BQ3E750 60 aa0.2□□□□□ -2.38
UBX4YMR067C YDL085C-AQ3E7B7 68 aaKnown RBP0.2□□□□□ -2.38
UBX4YMR067C YMR122W-AQ3E842 84 aa0.2□□□□□ -2.38
UBX4YMR067C QCR7P00128 127 aa0.19□□□□□ -2.38
UBX4YMR067C SPS2P08459 502 aa0.19□□□□□ -2.38
UBX4YMR067C UBC5P15732 148 aa0.19□□□□□ -2.38
UBX4YMR067C SEC59P20048 519 aa0.19□□□□□ -2.38
UBX4YMR067C AHC2P25649 128 aa0.19□□□□□ -2.38
UBX4YMR067C MRPL24P36525 258 aaPredicted RBP0.19□□□□□ -2.38
UBX4YMR067C SFT2P38166 215 aa0.19□□□□□ -2.38
UBX4YMR067C LSM2P38203 95 aaKnown RBP0.19□□□□□ -2.38
UBX4YMR067C DER1P38307 211 aa0.19□□□□□ -2.38
UBX4YMR067C SPI1P40092 148 aa0.19□□□□□ -2.38
UBX4YMR067C RPC10P40422 70 aa0.19□□□□□ -2.38
UBX4YMR067C YIL163CP40448 117 aa0.19□□□□□ -2.38
UBX4YMR067C PAM16P42949 149 aa0.19□□□□□ -2.38
UBX4YMR067C SBH1P52870 82 aa0.19□□□□□ -2.38
UBX4YMR067C YDR210WQ03482 75 aa0.19□□□□□ -2.38
UBX4YMR067C SPC2Q04969 178 aa0.19□□□□□ -2.38
UBX4YMR067C POC4Q12245 148 aaPredicted RBP0.19□□□□□ -2.38
UBX4YMR067C RDI1Q12434 202 aa0.19□□□□□ -2.38
UBX4YMR067C YBR200W-AQ3E755 54 aa0.19□□□□□ -2.38
UBX4YMR067C YLR099W-AQ3E798 87 aa0.19□□□□□ -2.38
UBX4YMR067C PCC1Q3E833 88 aa0.19□□□□□ -2.38
UBX4YMR067C Q0017Q9ZZX8 53 aa0.19□□□□□ -2.38
UBX4YMR067C RPS25BP0C0T4 108 aaKnown RBP0.18□□□□□ -2.38
UBX4YMR067C COX7P10174 60 aa0.18□□□□□ -2.38
UBX4YMR067C MRP17P28778 131 aa0.18□□□□□ -2.38
UBX4YMR067C MRP49P32388 137 aa0.18□□□□□ -2.38
UBX4YMR067C YHR173CP38864 112 aa0.18□□□□□ -2.38
UBX4YMR067C NVJ1P38881 321 aa0.18□□□□□ -2.38
UBX4YMR067C SEC72P39742 193 aaKnown RBP0.18□□□□□ -2.38
UBX4YMR067C CWP2P43497 92 aa0.18□□□□□ -2.38
UBX4YMR067C SPG1P50088 95 aa0.18□□□□□ -2.38
UBX4YMR067C MIC27P50945 234 aa0.18□□□□□ -2.38
UBX4YMR067C YGL193CP53097 103 aa0.18□□□□□ -2.38
UBX4YMR067C GIM3P53900 129 aa0.18□□□□□ -2.38
UBX4YMR067C YNL122CP53921 115 aaPredicted RBP0.18□□□□□ -2.38
UBX4YMR067C YMR082CQ04276 118 aa0.18□□□□□ -2.38
UBX4YMR067C SCP1Q08873 200 aa0.18□□□□□ -2.38
UBX4YMR067C YLR118CQ12354 227 aa0.18□□□□□ -2.38
UBX4YMR067C YMR175W-AQ3E766 64 aa0.18□□□□□ -2.38
UBX4YMR067C RPS25AQ3E792 108 aaPredicted RBP0.18□□□□□ -2.38
UBX4YMR067C PET20Q99373 253 aa0.18□□□□□ -2.38
UBX4YMR067C ENV10Q99382 181 aa0.18□□□□□ -2.38
UBX4YMR067C QCR2P07257 368 aa0.17□□□□□ -2.38
UBX4YMR067C YER039C-AP0CD97 72 aa0.17□□□□□ -2.38
UBX4YMR067C MRPL31P14063 131 aaPredicted RBP0.17□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 14 ms