RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C RRT13P40042 185 aa3.82□□□□□ -1.8
NUP116YMR047C GAT4P40569 121 aa3.82□□□□□ -1.8
NUP116YMR047C YML079WQ03629 201 aa3.82□□□□□ -1.8
NUP116YMR047C YLR302CO13544 120 aa3.82□□□□□ -1.8
NUP116YMR047C PBI2P0CT04 75 aaKnown RBP3.81□□□□□ -1.8
NUP116YMR047C DSE2P38844 325 aa3.81□□□□□ -1.8
NUP116YMR047C YAR068WP39564 161 aa3.81□□□□□ -1.8
NUP116YMR047C YMR175W-AQ3E766 64 aa3.81□□□□□ -1.8
NUP116YMR047C BET1P22804 142 aa3.81□□□□□ -1.8
NUP116YMR047C YDL242WQ07746 117 aa3.81□□□□□ -1.8
NUP116YMR047C BXI1P48558 297 aa3.8□□□□□ -1.8
NUP116YMR047C SDS23P53172 527 aa3.8□□□□□ -1.8
NUP116YMR047C RSM19P53733 91 aaPredicted RBP3.8□□□□□ -1.8
NUP116YMR047C POP3P53833 195 aaPredicted RBP3.8□□□□□ -1.8
NUP116YMR047C RTG1P32607 177 aa3.8□□□□□ -1.8
NUP116YMR047C YBL059WP34224 193 aa3.8□□□□□ -1.8
NUP116YMR047C YNL234WP53857 426 aa3.8□□□□□ -1.8
NUP116YMR047C SMD1Q02260 146 aaPredicted RBP3.8□□□□□ -1.8
NUP116YMR047C SYM1Q06563 197 aa3.8□□□□□ -1.8
NUP116YMR047C ROX3P25046 220 aa3.8□□□□□ -1.8
NUP116YMR047C YCR025CP25352 136 aa3.8□□□□□ -1.8
NUP116YMR047C FPR2P32472 135 aa3.8□□□□□ -1.8
NUP116YMR047C SWD3P38123 315 aa3.8□□□□□ -1.8
NUP116YMR047C LST8P41318 303 aa3.8□□□□□ -1.8
NUP116YMR047C TDA4P47153 279 aa3.8□□□□□ -1.8
NUP116YMR047C HOR7Q05827 59 aa3.8□□□□□ -1.8
NUP116YMR047C SHH4Q06236 168 aa3.8□□□□□ -1.8
NUP116YMR047C TIM18Q08749 192 aa3.8□□□□□ -1.8
NUP116YMR047C UBC4P15731 148 aa3.79□□□□□ -1.8
NUP116YMR047C YNL217WP40152 326 aa3.79□□□□□ -1.8
NUP116YMR047C YOR105WQ08504 108 aa3.79□□□□□ -1.8
NUP116YMR047C SOD1P00445 154 aaKnown RBP3.79□□□□□ -1.8
NUP116YMR047C YIL163CP40448 117 aa3.79□□□□□ -1.8
NUP116YMR047C YBR144CP34215 104 aa3.78□□□□□ -1.8
NUP116YMR047C YPT10P38146 199 aa3.78□□□□□ -1.8
NUP116YMR047C FYV4P38783 130 aaPredicted RBP3.78□□□□□ -1.8
NUP116YMR047C SVP26P38869 228 aa3.78□□□□□ -1.8
NUP116YMR047C YER181CP40097 107 aa3.78□□□□□ -1.8
NUP116YMR047C COA2Q3E823 68 aa3.78□□□□□ -1.8
NUP116YMR047C RPL16AP26784 199 aaKnown RBP3.78□□□□□ -1.8
NUP116YMR047C YHL042WP38729 150 aa3.78□□□□□ -1.8
NUP116YMR047C YLR296WQ05898 108 aa3.78□□□□□ -1.8
NUP116YMR047C MET32Q12041 191 aa3.78□□□□□ -1.8
NUP116YMR047C FZF1P32805 299 aa3.78□□□□□ -1.8
NUP116YMR047C YKL044WP36092 106 aa3.78□□□□□ -1.8
NUP116YMR047C PIS1P06197 220 aaKnown RBP3.77□□□□□ -1.81
NUP116YMR047C MRPL31P14063 131 aaPredicted RBP3.77□□□□□ -1.81
NUP116YMR047C YBR209WP38311 105 aa3.77□□□□□ -1.81
NUP116YMR047C YPL264CQ08980 353 aa3.77□□□□□ -1.81
NUP116YMR047C YOR192C-CQ3E736 78 aa3.77□□□□□ -1.81
NUP116YMR047C TOM6P33448 61 aa3.77□□□□□ -1.81
NUP116YMR047C KEG1P43614 200 aa3.77□□□□□ -1.81
NUP116YMR047C YHP1Q04116 353 aa3.77□□□□□ -1.81
NUP116YMR047C PBP4Q07362 185 aaKnown RBP3.77□□□□□ -1.81
NUP116YMR047C RPL11BQ3E757 174 aaPredicted RBP3.77□□□□□ -1.81
NUP116YMR047C GPI2P46961 280 aa3.77□□□□□ -1.81
NUP116YMR047C BRP1P53194 125 aa3.76□□□□□ -1.81
NUP116YMR047C YDR114CQ04597 100 aa3.76□□□□□ -1.81
NUP116YMR047C YOL160WQ08321 113 aa3.76□□□□□ -1.81
NUP116YMR047C EMC6Q12431 108 aa3.76□□□□□ -1.81
NUP116YMR047C YPL038W-AQ3E7B4 63 aa3.76□□□□□ -1.81
NUP116YMR047C AQY1P0CD91 305 aa3.76□□□□□ -1.81
NUP116YMR047C SFT2P38166 215 aa3.76□□□□□ -1.81
NUP116YMR047C HUA1P40325 198 aa3.75□□□□□ -1.81
NUP116YMR047C YFL015CP43578 164 aa3.75□□□□□ -1.81
NUP116YMR047C YGR164WP53291 111 aa3.75□□□□□ -1.81
NUP116YMR047C YGL258W-AQ3E740 77 aa3.75□□□□□ -1.81
NUP116YMR047C Q0255P03881 472 aa3.75□□□□□ -1.81
NUP116YMR047C SKI6P46948 246 aaPredicted RBP3.75□□□□□ -1.81
NUP116YMR047C YHR213WP0CI67 198 aa3.74□□□□□ -1.81
NUP116YMR047C RPL42AP0CX27 106 aaKnown RBP3.74□□□□□ -1.81
NUP116YMR047C RPL42BP0CX28 106 aaKnown RBP3.74□□□□□ -1.81
NUP116YMR047C AHT1P29589 182 aa3.74□□□□□ -1.81
NUP116YMR047C SPT4P32914 102 aaPredicted RBP3.74□□□□□ -1.81
NUP116YMR047C CRH1P53301 507 aa3.74□□□□□ -1.81
NUP116YMR047C LSM6Q06406 86 aaKnown RBP3.74□□□□□ -1.81
NUP116YMR047C YLR112WQ12130 139 aa3.74□□□□□ -1.81
NUP116YMR047C USV1Q12132 391 aa3.74□□□□□ -1.81
NUP116YMR047C YDR381C-AQ3E6R5 114 aa3.74□□□□□ -1.81
NUP116YMR047C YML122CQ03207 126 aa3.74□□□□□ -1.81
NUP116YMR047C TDA8Q6B2U8 126 aa3.74□□□□□ -1.81
NUP116YMR047C MPC2P38857 129 aa3.73□□□□□ -1.81
NUP116YMR047C YPL261CQ08976 102 aa3.73□□□□□ -1.81
NUP116YMR047C SMT3Q12306 101 aaKnown RBP3.73□□□□□ -1.81
NUP116YMR047C YBR255C-AQ3E776 120 aa3.73□□□□□ -1.81
NUP116YMR047C YAL064WP39711 94 aa3.73□□□□□ -1.81
NUP116YMR047C YER187WP40102 141 aa3.73□□□□□ -1.81
NUP116YMR047C ICY1Q04329 127 aa3.73□□□□□ -1.81
NUP116YMR047C UTP20P35194 2493 aaKnown RBP3.73□□□□□ -1.81
NUP116YMR047C YEL067CP39978 195 aa3.73□□□□□ -1.81
NUP116YMR047C YCR041WP37265 110 aa3.72□□□□□ -1.81
NUP116YMR047C HAL1Q01766 294 aa3.72□□□□□ -1.81
NUP116YMR047C YBR182C-AQ8TGU6 64 aa3.72□□□□□ -1.81
NUP116YMR047C YKL023C-AQ2V2P3 75 aa3.72□□□□□ -1.81
NUP116YMR047C RPL11AP0C0W9 174 aaKnown RBP3.71□□□□□ -1.82
NUP116YMR047C RPL23AP0CX41 137 aaKnown RBP3.71□□□□□ -1.82
NUP116YMR047C RPL23BP0CX42 137 aaKnown RBP3.71□□□□□ -1.82
NUP116YMR047C YIA6P40556 373 aa3.71□□□□□ -1.82
NUP116YMR047C ICS3P47034 131 aa3.71□□□□□ -1.82
NUP116YMR047C YGL118CP53132 145 aa3.71□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 113.6 ms