RNA–Protein interactions for RNA: YLR411W

CTR3, Transcript of High-affinity copper transporter of the plasma membrane, yeastyeast

Gene CTR3, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR3YLR411W SIM1P40472 476 aa3.99□□□□□ -1.77
CTR3YLR411W LSM6Q06406 86 aaKnown RBP3.99□□□□□ -1.77
CTR3YLR411W CCW12Q12127 133 aa3.99□□□□□ -1.77
CTR3YLR411W OXA1P39952 402 aa3.98□□□□□ -1.77
CTR3YLR411W ABM1P47146 123 aa3.98□□□□□ -1.77
CTR3YLR411W MSA1Q08471 629 aa3.98□□□□□ -1.77
CTR3YLR411W YPL278CQ08990 100 aa3.98□□□□□ -1.77
CTR3YLR411W MRPL23Q12487 163 aaPredicted RBP3.98□□□□□ -1.77
CTR3YLR411W DFM1Q12743 341 aaKnown RBP3.98□□□□□ -1.77
CTR3YLR411W YCL048W-AQ2V2Q2 79 aa3.98□□□□□ -1.77
CTR3YLR411W SNU13P39990 126 aaKnown RBP3.97□□□□□ -1.77
CTR3YLR411W KEG1P43614 200 aa3.97□□□□□ -1.77
CTR3YLR411W OST2P46964 130 aa3.97□□□□□ -1.77
CTR3YLR411W YJR085CP47131 105 aaKnown RBP3.97□□□□□ -1.77
CTR3YLR411W YNR077CP53758 84 aa3.97□□□□□ -1.77
CTR3YLR411W YLR194CQ05777 254 aa3.97□□□□□ -1.77
CTR3YLR411W HPA2Q06592 156 aa3.97□□□□□ -1.77
CTR3YLR411W HFA1P32874 2273 aa3.96□□□□□ -1.78
CTR3YLR411W VAR1P02381 398 aa3.96□□□□□ -1.78
CTR3YLR411W YCR085WP25650 117 aa3.96□□□□□ -1.78
CTR3YLR411W PEX17P40155 199 aa3.96□□□□□ -1.78
CTR3YLR411W IRC23Q08416 157 aa3.96□□□□□ -1.78
CTR3YLR411W COX10P21592 462 aa3.95□□□□□ -1.78
CTR3YLR411W YHR022CP38763 256 aa3.95□□□□□ -1.78
CTR3YLR411W COX14P39103 70 aa3.95□□□□□ -1.78
CTR3YLR411W YEL067CP39978 195 aa3.95□□□□□ -1.78
CTR3YLR411W AIM11P87275 137 aa3.95□□□□□ -1.78
CTR3YLR411W FCY1Q12178 158 aa3.95□□□□□ -1.78
CTR3YLR411W SPO24Q3E752 67 aa3.95□□□□□ -1.78
CTR3YLR411W YBR200W-AQ3E755 54 aa3.95□□□□□ -1.78
CTR3YLR411W YNL146C-AQ3E7Z1 64 aa3.95□□□□□ -1.78
CTR3YLR411W SEN1Q00416 2231 aaKnown RBP3.94□□□□□ -1.78
CTR3YLR411W YCH1P42937 148 aa3.94□□□□□ -1.78
CTR3YLR411W DCV1P43595 202 aa3.94□□□□□ -1.78
CTR3YLR411W AIM34Q03673 198 aa3.94□□□□□ -1.78
CTR3YLR411W Q0255P03881 472 aa3.93□□□□□ -1.78
CTR3YLR411W QCR8P08525 94 aa3.93□□□□□ -1.78
CTR3YLR411W YDL022C-AP0C5L6 82 aa3.93□□□□□ -1.78
CTR3YLR411W YJR146WP47174 117 aa3.93□□□□□ -1.78
CTR3YLR411W RRG8Q06109 277 aa3.93□□□□□ -1.78
CTR3YLR411W INO4P13902 151 aa3.92□□□□□ -1.78
CTR3YLR411W INO2P26798 304 aa3.92□□□□□ -1.78
CTR3YLR411W ISD11Q6Q560 94 aa3.92□□□□□ -1.78
CTR3YLR411W KRE1P17260 313 aa3.91□□□□□ -1.78
CTR3YLR411W RPL16AP26784 199 aaKnown RBP3.91□□□□□ -1.78
CTR3YLR411W YER085CP40058 173 aa3.91□□□□□ -1.78
CTR3YLR411W YIR020CP40575 100 aa3.91□□□□□ -1.78
CTR3YLR411W YFR057WP43625 151 aa3.91□□□□□ -1.78
CTR3YLR411W COX12Q01519 83 aa3.91□□□□□ -1.78
CTR3YLR411W RPA12P32529 125 aaKnown RBP3.9□□□□□ -1.79
CTR3YLR411W UGX2P32772 223 aa3.9□□□□□ -1.79
CTR3YLR411W YAR029WP39549 74 aa3.9□□□□□ -1.79
CTR3YLR411W MIG3P39943 394 aa3.9□□□□□ -1.79
CTR3YLR411W YFL065CP43539 102 aa3.9□□□□□ -1.79
CTR3YLR411W EOS1P53938 366 aa3.9□□□□□ -1.79
CTR3YLR411W HAL1Q01766 294 aa3.9□□□□□ -1.79
CTR3YLR411W YPR203WQ08994 102 aa3.9□□□□□ -1.79
CTR3YLR411W YCR075W-AQ3E830 75 aa3.9□□□□□ -1.79
CTR3YLR411W ATP15P21306 62 aa3.89□□□□□ -1.79
CTR3YLR411W VTC1P40046 129 aaRIP-Chip data3.89□□□□□ -1.79not detected
CTR3YLR411W FIP1P45976 327 aa3.89□□□□□ -1.79
CTR3YLR411W MRPS12P53732 153 aa3.89□□□□□ -1.79
CTR3YLR411W SPG4Q04438 115 aa3.89□□□□□ -1.79
CTR3YLR411W YFL041W-AQ3E817 63 aa3.89□□□□□ -1.79
CTR3YLR411W RPL18AP0CX49 186 aaKnown RBP3.88□□□□□ -1.79
CTR3YLR411W RPL18BP0CX50 186 aaKnown RBP3.88□□□□□ -1.79
CTR3YLR411W RPL16BP26785 198 aaKnown RBP3.88□□□□□ -1.79
CTR3YLR411W NRG2P38082 220 aa3.88□□□□□ -1.79
CTR3YLR411W SHU1P38751 150 aa3.88□□□□□ -1.79
CTR3YLR411W YHR130CP38834 111 aa3.88□□□□□ -1.79
CTR3YLR411W YAR1P46683 200 aa3.88□□□□□ -1.79
CTR3YLR411W VPS55P47111 140 aa3.88□□□□□ -1.79
CTR3YLR411W YPR117WQ06116 2489 aa3.88□□□□□ -1.79
CTR3YLR411W STF1P01098 86 aa3.87□□□□□ -1.79
CTR3YLR411W TOS8P53147 276 aa3.87□□□□□ -1.79
CTR3YLR411W HOR7Q05827 59 aa3.87□□□□□ -1.79
CTR3YLR411W YLR042CQ07990 161 aa3.87□□□□□ -1.79
CTR3YLR411W PRM7Q12459 698 aa3.87□□□□□ -1.79
CTR3YLR411W YAL063C-AQ3E791 96 aa3.87□□□□□ -1.79
CTR3YLR411W YOR304C-AO14468 76 aa3.86□□□□□ -1.79
CTR3YLR411W VMA11P32842 164 aa3.86□□□□□ -1.79
CTR3YLR411W YER135CP40082 130 aa3.86□□□□□ -1.79
CTR3YLR411W YIA6P40556 373 aa3.86□□□□□ -1.79
CTR3YLR411W SKI6P46948 246 aaPredicted RBP3.86□□□□□ -1.79
CTR3YLR411W YNL184CP53876 108 aa3.86□□□□□ -1.79
CTR3YLR411W MRPS8Q03799 155 aa3.86□□□□□ -1.79
CTR3YLR411W YPR013CQ12145 317 aa3.86□□□□□ -1.79
CTR3YLR411W RPL28P02406 149 aaKnown RBP3.85□□□□□ -1.79
CTR3YLR411W RAD6P06104 172 aa3.85□□□□□ -1.79
CTR3YLR411W SPS100P13130 326 aa3.85□□□□□ -1.79
CTR3YLR411W YGR025WP53216 100 aa3.85□□□□□ -1.79
CTR3YLR411W RGM1Q00453 211 aa3.85□□□□□ -1.79
CTR3YLR411W YMR244WQ04018 355 aa3.85□□□□□ -1.79
CTR3YLR411W YOR011W-AQ3E807 68 aa3.85□□□□□ -1.79
CTR3YLR411W YOR020W-AQ3E824 90 aa3.85□□□□□ -1.79
CTR3YLR411W YOL085CQ99345 113 aa3.85□□□□□ -1.79
CTR3YLR411W UBC5P15732 148 aa3.84□□□□□ -1.79
CTR3YLR411W YEL008WP40001 126 aa3.84□□□□□ -1.79
CTR3YLR411W RRT13P40042 185 aa3.84□□□□□ -1.79
CTR3YLR411W PMP3P87284 55 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 24.8 ms