RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C COF1Q03048 143 aaKnown RBP9.67□□□□□ -0.86
BDF1YLR399C RPS23AP0CX29 145 aaKnown RBP9.66□□□□□ -0.86
BDF1YLR399C RPS23BP0CX30 145 aa9.66□□□□□ -0.86
BDF1YLR399C YIL059CP40520 121 aa9.66□□□□□ -0.86
BDF1YLR399C URM1P40554 99 aaPredicted RBP9.65□□□□□ -0.86
BDF1YLR399C RAD6P06104 172 aa9.65□□□□□ -0.87
BDF1YLR399C LCB3P47013 409 aa9.64□□□□□ -0.87
BDF1YLR399C NCE103P53615 221 aa9.64□□□□□ -0.87
BDF1YLR399C INO2P26798 304 aa9.63□□□□□ -0.87
BDF1YLR399C DUO1P53168 247 aaKnown RBP9.63□□□□□ -0.87
BDF1YLR399C CSF1Q12150 2958 aa9.63□□□□□ -0.87
BDF1YLR399C PBI2P0CT04 75 aaKnown RBP9.63□□□□□ -0.87
BDF1YLR399C YGR025WP53216 100 aa9.63□□□□□ -0.87
BDF1YLR399C MRPL38P35996 138 aaPredicted RBP9.62□□□□□ -0.87
BDF1YLR399C BPH1P25356 2167 aa9.62□□□□□ -0.87
BDF1YLR399C RPL18AP0CX49 186 aaKnown RBP9.62□□□□□ -0.87
BDF1YLR399C RPL18BP0CX50 186 aaKnown RBP9.62□□□□□ -0.87
BDF1YLR399C CAX4P53223 239 aa9.62□□□□□ -0.87
BDF1YLR399C MRPS12P53732 153 aa9.61□□□□□ -0.87
BDF1YLR399C YDR029WQ12111 104 aa9.61□□□□□ -0.87
BDF1YLR399C AIM19P40502 157 aa9.6□□□□□ -0.87
BDF1YLR399C SMP1P38128 452 aa9.6□□□□□ -0.87
BDF1YLR399C NRM1P53718 249 aa9.6□□□□□ -0.87
BDF1YLR399C PBP4Q07362 185 aaKnown RBP9.6□□□□□ -0.87
BDF1YLR399C YDL009CQ12210 107 aa9.6□□□□□ -0.87
BDF1YLR399C RPL42AP0CX27 106 aaKnown RBP9.59□□□□□ -0.87
BDF1YLR399C RPL42BP0CX28 106 aaKnown RBP9.59□□□□□ -0.87
BDF1YLR399C YHL042WP38729 150 aa9.59□□□□□ -0.87
BDF1YLR399C SGN1P40561 250 aaKnown RBP RIP-Chip data9.59□□□□□ -0.87not detected
BDF1YLR399C YDR381C-AQ3E6R5 114 aa9.59□□□□□ -0.87
BDF1YLR399C LDB16P25587 256 aa9.58□□□□□ -0.88
BDF1YLR399C DCV1P43595 202 aa9.57□□□□□ -0.88
BDF1YLR399C PBA1Q05778 276 aa9.57□□□□□ -0.88
BDF1YLR399C YOL085CQ99345 113 aa9.57□□□□□ -0.88
BDF1YLR399C ECM12O13529 151 aa9.57□□□□□ -0.88
BDF1YLR399C CCW14O13547 238 aa9.57□□□□□ -0.88
BDF1YLR399C YER039C-AP0CD97 72 aa9.57□□□□□ -0.88
BDF1YLR399C YER121WP40076 114 aa9.55□□□□□ -0.88
BDF1YLR399C RPL16AP26784 199 aaKnown RBP9.55□□□□□ -0.88
BDF1YLR399C WWM1P43582 211 aaKnown RBP9.55□□□□□ -0.88
BDF1YLR399C SED1Q01589 338 aa9.54□□□□□ -0.88
BDF1YLR399C BNA1P47096 177 aa9.54□□□□□ -0.88
BDF1YLR399C YJR146WP47174 117 aa9.54□□□□□ -0.88
BDF1YLR399C YGR045CP53229 120 aa9.54□□□□□ -0.88
BDF1YLR399C RPB10P22139 70 aa9.53□□□□□ -0.88
BDF1YLR399C POR2P40478 281 aa9.53□□□□□ -0.88
BDF1YLR399C YGR219WP53307 113 aa9.52□□□□□ -0.88
BDF1YLR399C TRP1P00912 224 aa9.52□□□□□ -0.89
BDF1YLR399C DAP1Q12091 152 aa9.52□□□□□ -0.89
BDF1YLR399C PEX17P40155 199 aa9.51□□□□□ -0.89
BDF1YLR399C YPL038W-AQ3E7B4 63 aa9.51□□□□□ -0.89
BDF1YLR399C RPL15AP05748 204 aaKnown RBP9.51□□□□□ -0.89
BDF1YLR399C STF1P01098 86 aa9.5□□□□□ -0.89
BDF1YLR399C UBC5P15732 148 aa9.5□□□□□ -0.89
BDF1YLR399C YBR200W-AQ3E755 54 aa9.5□□□□□ -0.89
BDF1YLR399C HUR1P45820 110 aa9.49□□□□□ -0.89
BDF1YLR399C YDR034W-BQ6Q5X2 51 aa9.49□□□□□ -0.89
BDF1YLR399C KEG1P43614 200 aa9.47□□□□□ -0.89
BDF1YLR399C SBH2P52871 88 aa9.47□□□□□ -0.89
BDF1YLR399C YCL048W-AQ2V2Q2 79 aa9.46□□□□□ -0.89
BDF1YLR399C RPL2AP0CX45 254 aaKnown RBP9.46□□□□□ -0.9
BDF1YLR399C RPL2BP0CX46 254 aaKnown RBP9.46□□□□□ -0.9
BDF1YLR399C TOM6P33448 61 aa9.46□□□□□ -0.9
BDF1YLR399C SHU1P38751 150 aa9.46□□□□□ -0.9
BDF1YLR399C YNL046WP53956 172 aa9.46□□□□□ -0.9
BDF1YLR399C YHR022CP38763 256 aa9.45□□□□□ -0.9
BDF1YLR399C YGL088WP53151 121 aa9.45□□□□□ -0.9
BDF1YLR399C YLR042CQ07990 161 aa9.45□□□□□ -0.9
BDF1YLR399C YHL018WP38744 120 aaPredicted RBP9.44□□□□□ -0.9
BDF1YLR399C MPC2P38857 129 aa9.44□□□□□ -0.9
BDF1YLR399C EMC6Q12431 108 aa9.44□□□□□ -0.9
BDF1YLR399C YBR209WP38311 105 aa9.43□□□□□ -0.9
BDF1YLR399C MSA2P36157 363 aa9.43□□□□□ -0.9
BDF1YLR399C SHH4Q06236 168 aa9.43□□□□□ -0.9
BDF1YLR399C IES6P32617 166 aa9.42□□□□□ -0.9
BDF1YLR399C SIM1P40472 476 aa9.42□□□□□ -0.9
BDF1YLR399C RPL16BP26785 198 aaKnown RBP9.41□□□□□ -0.9
BDF1YLR399C KRE9P39005 276 aa9.41□□□□□ -0.9
BDF1YLR399C YOR034C-AQ3E735 80 aa9.41□□□□□ -0.9
BDF1YLR399C SVP26P38869 228 aa9.4□□□□□ -0.91
BDF1YLR399C RRT13P40042 185 aa9.4□□□□□ -0.91
BDF1YLR399C PPT2Q12036 173 aa9.4□□□□□ -0.91
BDF1YLR399C YHL037CP38733 133 aa9.39□□□□□ -0.91
BDF1YLR399C QCR8P08525 94 aa9.38□□□□□ -0.91
BDF1YLR399C YCR050CP25630 102 aa9.38□□□□□ -0.91
BDF1YLR399C YSY6P38374 65 aa9.38□□□□□ -0.91
BDF1YLR399C IRA1P18963 3092 aa9.38□□□□□ -0.91
BDF1YLR399C YEL008WP40001 126 aa9.38□□□□□ -0.91
BDF1YLR399C YNL194CP40169 301 aa9.37□□□□□ -0.91
BDF1YLR399C CCW12Q12127 133 aa9.37□□□□□ -0.91
BDF1YLR399C RGM1Q00453 211 aa9.36□□□□□ -0.91
BDF1YLR399C UBC11P52492 156 aa9.35□□□□□ -0.91
BDF1YLR399C YOR011W-AQ3E807 68 aa9.35□□□□□ -0.91
BDF1YLR399C YML122CQ03207 126 aa9.35□□□□□ -0.91
BDF1YLR399C FMP27Q06179 2628 aa9.34□□□□□ -0.91
BDF1YLR399C SBH1P52870 82 aa9.34□□□□□ -0.91
BDF1YLR399C ARC15P40518 154 aaRIP-Chip data9.33□□□□□ -0.92not detected
BDF1YLR399C YPR013CQ12145 317 aa9.33□□□□□ -0.92
BDF1YLR399C YLR285C-AQ3E771 56 aa9.31□□□□□ -0.92
BDF1YLR399C YER187WP40102 141 aa9.3□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms