RNA–Protein interactions for RNA: YLR243W

GPN3, Transcript of Putative GTPase with a role in biogenesis of RNA pol II and polIII, yeast

Gene GPN3, Length 819 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GPN3	YLR243W	YMR175W-A	Q3E766	64 aa		0.88	□□□□□ -2.27
GPN3	YLR243W	PRP8	P33334	2413 aa	Known RBP	0.88	□□□□□ -2.27
GPN3	YLR243W	DNA2	P38859	1522 aa		0.88	□□□□□ -2.27
GPN3	YLR243W	MLP1	Q02455	1875 aa	Known RBP	0.88	□□□□□ -2.27
GPN3	YLR243W	SMC4	Q12267	1418 aa		0.88	□□□□□ -2.27
GPN3	YLR243W	RIF1	P29539	1916 aa		0.87	□□□□□ -2.27
GPN3	YLR243W	HFA1	P32874	2273 aa		0.87	□□□□□ -2.27
GPN3	YLR243W	MMS22	Q06164	1454 aa		0.87	□□□□□ -2.27
GPN3	YLR243W	MON2	P48563	1636 aa	Predicted RBP	0.87	□□□□□ -2.27
GPN3	YLR243W	PAU19	P0CE85	124 aa		0.87	□□□□□ -2.27
GPN3	YLR243W	YHR213W	P0CI67	198 aa		0.87	□□□□□ -2.27
GPN3	YLR243W	PAU3	P25610	124 aa		0.87	□□□□□ -2.27
GPN3	YLR243W	RPA12	P32529	125 aa	Known RBP	0.87	□□□□□ -2.27
GPN3	YLR243W	HUR1	P45820	110 aa		0.87	□□□□□ -2.27
GPN3	YLR243W	MIX14	Q04341	121 aa		0.87	□□□□□ -2.27
GPN3	YLR243W	YDR119W-A	Q2V2P9	66 aa		0.87	□□□□□ -2.27
GPN3	YLR243W	COA6	Q3E846	104 aa		0.87	□□□□□ -2.27
GPN3	YLR243W	SIN3	P22579	1536 aa		0.87	□□□□□ -2.27
GPN3	YLR243W	SRB8	P25648	1427 aa		0.87	□□□□□ -2.27
GPN3	YLR243W	RPO21	P04050	1733 aa	Known RBP	0.86	□□□□□ -2.27
GPN3	YLR243W	IQG1	Q12280	1495 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	ECM29	P38737	1868 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	ROM2	P51862	1356 aa	Known RBP	0.86	□□□□□ -2.27
GPN3	YLR243W	RTC6	O14464	93 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	RPS25B	P0C0T4	108 aa	Known RBP	0.86	□□□□□ -2.27
GPN3	YLR243W	PAU21	P0CE86	164 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	PAU22	P0CE87	164 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	PAU16	P35994	123 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	YHR138C	P38841	114 aa	Predicted RBP	0.86	□□□□□ -2.27
GPN3	YLR243W	YIR020C	P40575	100 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	PAU15	P40585	124 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	PAU5	P43575	122 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	YIL014C-A	Q02598	104 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	ICY1	Q04329	127 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	YPL261C	Q08976	102 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	CCW12	Q12127	133 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	DAD1	Q12248	94 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	YPR145C-A	Q2V2P0	78 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	CMC4	Q3E7A9	73 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	YIL134C-A	Q45U18	67 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	ENV10	Q99382	181 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	SSK2	P53599	1579 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	VPS15	P22219	1454 aa		0.86	□□□□□ -2.27
GPN3	YLR243W	YCF1	P39109	1515 aa	Known RBP	0.85	□□□□□ -2.27
GPN3	YLR243W	GDB1	Q06625	1536 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	DOP1	Q03921	1698 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	TY4B-H	P0C2J7	1802 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	RPL22A	P05749	121 aa	Known RBP	0.85	□□□□□ -2.27
GPN3	YLR243W	RPS22A	P0C0W1	130 aa	Known RBP	0.85	□□□□□ -2.27
GPN3	YLR243W	ATX1	P38636	73 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	HSP10	P38910	106 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	GCV3	P39726	170 aa	Predicted RBP	0.85	□□□□□ -2.27
GPN3	YLR243W	YNL198C	P40166	100 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	LST8	P41318	303 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	DCV1	P43595	202 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	IMP2	P46972	177 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	ICS3	P47034	131 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	YGL149W	P53116	101 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	BRP1	P53194	125 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	RPL22B	P56628	122 aa	Known RBP	0.85	□□□□□ -2.27
GPN3	YLR243W	AVO2	Q04749	426 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	YLR194C	Q05777	254 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	NAT5	Q08689	176 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	YLR363W-A	Q3E747	85 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	RPS25A	Q3E792	108 aa	Predicted RBP	0.85	□□□□□ -2.27
GPN3	YLR243W	YNR034W-A	Q3E841	98 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	SUS1	Q6WNK7	96 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	OST5	Q92316	86 aa		0.85	□□□□□ -2.27
GPN3	YLR243W	UTP10	P42945	1769 aa	Known RBP	0.85	□□□□□ -2.27
GPN3	YLR243W	PDR12	Q02785	1511 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	RRP5	Q05022	1729 aa	Known RBP	0.84	□□□□□ -2.27
GPN3	YLR243W	DNF1	P32660	1571 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	YJL197C-A	P0C5P0	93 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	HSP150	P32478	413 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	NHP2	P32495	156 aa	Predicted RBP	0.84	□□□□□ -2.27
GPN3	YLR243W	TOM6	P33448	61 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	ATG8	P38182	117 aa	RIP-Chip data	0.84	□□□□□ -2.27	not detected
GPN3	YLR243W	YBR292C	P38357	123 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	COX23	P38824	151 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	RSM18	P40033	138 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	YGR269W	P40326	108 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	SWM2	P40342	146 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	VMA21	P41806	77 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	ATP19	P81451	68 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	YML079W	Q03629	201 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	YPR153W	Q06537	140 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.84	□□□□□ -2.27
GPN3	YLR243W	PCC1	Q3E833	88 aa		0.84	□□□□□ -2.27
GPN3	YLR243W	ESP1	Q03018	1630 aa		0.84	□□□□□ -2.28
GPN3	YLR243W	ULS1	Q08562	1619 aa		0.84	□□□□□ -2.28
GPN3	YLR243W	STT4	P37297	1900 aa		0.83	□□□□□ -2.28
GPN3	YLR243W	CDC39	P25655	2108 aa	Known RBP	0.83	□□□□□ -2.28
GPN3	YLR243W	FKS3	Q04952	1785 aa		0.83	□□□□□ -2.28
GPN3	YLR243W	HMRA2	P0CY13	119 aa		0.83	□□□□□ -2.28
GPN3	YLR243W	ROX3	P25046	220 aa		0.83	□□□□□ -2.28
GPN3	YLR243W	TIM12	P32830	109 aa		0.83	□□□□□ -2.28
GPN3	YLR243W	YHL005C	P38752	130 aa		0.83	□□□□□ -2.28
GPN3	YLR243W	MIC27	P50945	234 aa		0.83	□□□□□ -2.28
GPN3	YLR243W	PAU23	Q07987	124 aa		0.83	□□□□□ -2.28
GPN3	YLR243W	PAU17	Q12370	124 aa		0.83	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms