RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	YJL027C	P47063	138 aa	Predicted RBP	0.95	□□□□□ -2.26
SMC4	YLR086W	MPC3	P53311	146 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	HSK3	P69852	69 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	MIX17	Q03667	156 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	GPI19	Q04082	140 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	RIM9	Q04734	239 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	COA4	Q05809	96 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	YLR422W	Q06409	1932 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	RPL2A	P0CX45	254 aa	Known RBP	0.95	□□□□□ -2.26
SMC4	YLR086W	RPL2B	P0CX46	254 aa	Known RBP	0.95	□□□□□ -2.26
SMC4	YLR086W	YGL010W	P25338	174 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	YKL102C	P34249	101 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	YJR015W	P47090	510 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	GRX5	Q02784	150 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	SHH3	Q04487	196 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	AVO2	Q04749	426 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	SHH4	Q06236	168 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	YKL023C-A	Q2V2P3	75 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	VMA9	Q3E7B6	73 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	YLR236C	A0A023PZG4	107 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	YHR130C	P38834	111 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	AIM34	Q03673	198 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	YOL160W	Q08321	113 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	DGA1	Q08650	418 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	GSP2	P32836	220 aa	Known RBP	0.95	□□□□□ -2.26
SMC4	YLR086W	MRPL11	P36521	249 aa	Predicted RBP	0.95	□□□□□ -2.26
SMC4	YLR086W	ATG8	P38182	117 aa	RIP-Chip data	0.95	□□□□□ -2.26	not detected
SMC4	YLR086W	YHR140W	P38842	239 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	TDA2	P40045	126 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	VTC1	P40046	129 aa	RIP-Chip data	0.95	□□□□□ -2.26	RIP-Chip
SMC4	YLR086W	FLX1	P40464	311 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	YJR111C	P47148	283 aa	Known RBP	0.95	□□□□□ -2.26
SMC4	YLR086W	YMR082C	Q04276	118 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	PAU23	Q07987	124 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	PAU17	Q12370	124 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	HUT1	Q12520	339 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	ENV10	Q99382	181 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	IGO2	Q9P305	131 aa		0.95	□□□□□ -2.26
SMC4	YLR086W	RPS11A	P0CX47	156 aa	Known RBP	0.94	□□□□□ -2.26
SMC4	YLR086W	RPS11B	P0CX48	156 aa	Known RBP	0.94	□□□□□ -2.26
SMC4	YLR086W	SRP21	P32342	167 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	RPS27A	P35997	82 aa	Known RBP	0.94	□□□□□ -2.26
SMC4	YLR086W	PDX3	P38075	228 aa	Known RBP	0.94	□□□□□ -2.26
SMC4	YLR086W	RPS27B	P38711	82 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	YHL042W	P38729	150 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	MSL1	P40567	111 aa	Predicted RBP	0.94	□□□□□ -2.26
SMC4	YLR086W	PAM16	P42949	149 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	CYT2	Q00873	224 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	RDS3	Q06835	107 aa	Predicted RBP	0.94	□□□□□ -2.26
SMC4	YLR086W	CSI2	Q08054	341 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	FIT3	Q08907	204 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	CCW12	Q12127	133 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	YMR175W-A	Q3E766	64 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	STT4	P37297	1900 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	FMP49	A0A023PZB3	126 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	POR1	P04840	283 aa	Known RBP	0.94	□□□□□ -2.26
SMC4	YLR086W	PAU16	P35994	123 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	MRPL38	P35996	138 aa	Predicted RBP	0.94	□□□□□ -2.26
SMC4	YLR086W	SFT2	P38166	215 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	ELC1	Q03071	99 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	YNL146C-A	Q3E7Z1	64 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	YOR381W-A	Q3E804	55 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	GSP1	P32835	219 aa	Known RBP	0.94	□□□□□ -2.26
SMC4	YLR086W	RPB7	P34087	171 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	IRC23	Q08416	157 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	ATG41	Q12048	136 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	YOR015W	Q12169	119 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	ATP20	Q12233	115 aa		0.94	□□□□□ -2.26
SMC4	YLR086W	SLH1	P53327	1967 aa	Known RBP	0.94	□□□□□ -2.26
SMC4	YLR086W	PFY1	P07274	126 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	MRPL31	P14063	131 aa	Predicted RBP	0.93	□□□□□ -2.26
SMC4	YLR086W	TOS6	P48560	102 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	YDR274C	P87283	123 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	SGF11	Q03067	99 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	YDR102C	Q03864	110 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	YKL018C-A	Q3E7A7	99 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	PAI3	P01094	68 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	YCR023C	P25351	611 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	SSS1	P35179	80 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	SRP14	P38985	146 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	THG1	P53215	237 aa	Known RBP	0.93	□□□□□ -2.26
SMC4	YLR086W	EST3	Q03096	181 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	YLR363W-A	Q3E747	85 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	BEM2	P39960	2167 aa	Known RBP	0.93	□□□□□ -2.26
SMC4	YLR086W	HSP150	P32478	413 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	MRPL24	P36525	258 aa	Predicted RBP	0.93	□□□□□ -2.26
SMC4	YLR086W	LST8	P41318	303 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	YGR039W	P53225	103 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	YLR162W	Q06235	118 aa		0.93	□□□□□ -2.26
SMC4	YLR086W	COX5B	P00425	151 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	YKR070W	P36151	352 aa	Known RBP	0.92	□□□□□ -2.26
SMC4	YLR086W	YER181C	P40097	107 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	YNR077C	P53758	84 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	YOR008C-A	Q3E7B9	74 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	COA2	Q3E823	68 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	YBL039W-B	P0C268	59 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	DDR48	P18899	430 aa	Known RBP	0.92	□□□□□ -2.26
SMC4	YLR086W	VMA21	P41806	77 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	SNN1	P48232	102 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	BRP1	P53194	125 aa		0.92	□□□□□ -2.26

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms