RNA–Protein interactions for RNA: YLR062C

BUD28, Transcript of Dubious open reading frame, yeastyeast

Gene BUD28, Length 378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD28YLR062C ADH2P00331 348 aaKnown RBP3.39□□□□□ -1.87
BUD28YLR062C TRP1P00912 224 aa3.39□□□□□ -1.87
BUD28YLR062C POR1P04840 283 aaKnown RBP3.39□□□□□ -1.87
BUD28YLR062C AIM29P36154 155 aa3.39□□□□□ -1.87
BUD28YLR062C YBL081WP38180 368 aaKnown RBP3.39□□□□□ -1.87
BUD28YLR062C SEC72P39742 193 aaKnown RBP3.39□□□□□ -1.87
BUD28YLR062C RPC10P40422 70 aa3.39□□□□□ -1.87
BUD28YLR062C YIL014C-AQ02598 104 aa3.39□□□□□ -1.87
BUD28YLR062C ERG27Q12452 347 aaKnown RBP3.39□□□□□ -1.87
BUD28YLR062C AQY1P0CD91 305 aa3.38□□□□□ -1.87
BUD28YLR062C PAU19P0CE85 124 aa3.38□□□□□ -1.87
BUD28YLR062C PAU21P0CE86 164 aa3.38□□□□□ -1.87
BUD28YLR062C PAU22P0CE87 164 aa3.38□□□□□ -1.87
BUD28YLR062C PRE1P22141 198 aaKnown RBP3.38□□□□□ -1.87
BUD28YLR062C PAU3P25610 124 aa3.38□□□□□ -1.87
BUD28YLR062C YBR219CP38317 127 aa3.38□□□□□ -1.87
BUD28YLR062C YAL064WP39711 94 aa3.38□□□□□ -1.87
BUD28YLR062C YER085CP40058 173 aa3.38□□□□□ -1.87
BUD28YLR062C TOS6P48560 102 aa3.38□□□□□ -1.87
BUD28YLR062C YLR194CQ05777 254 aa3.38□□□□□ -1.87
BUD28YLR062C DFM1Q12743 341 aaKnown RBP3.38□□□□□ -1.87
BUD28YLR062C YPR014CQ6B0W2 109 aa3.38□□□□□ -1.87
BUD28YLR062C YEL008WP40001 126 aa3.37□□□□□ -1.87
BUD28YLR062C NSE4P43124 402 aa3.37□□□□□ -1.87
BUD28YLR062C OST3P48439 350 aa3.37□□□□□ -1.87
BUD28YLR062C HHO1P53551 258 aa3.37□□□□□ -1.87
BUD28YLR062C YDR029WQ12111 104 aa3.37□□□□□ -1.87
BUD28YLR062C YOR008C-AQ3E7B9 74 aa3.37□□□□□ -1.87
BUD28YLR062C ENV10Q99382 181 aa3.37□□□□□ -1.87
BUD28YLR062C CIN5P40917 295 aa3.36□□□□□ -1.87
BUD28YLR062C YCL021W-AQ96VH3 125 aa3.36□□□□□ -1.87
BUD28YLR062C SMP1P38128 452 aa3.35□□□□□ -1.87
BUD28YLR062C YAR029WP39549 74 aa3.35□□□□□ -1.87
BUD28YLR062C SNA2P56508 79 aa3.35□□□□□ -1.87
BUD28YLR062C PKR1Q03880 122 aaKnown RBP3.35□□□□□ -1.87
BUD28YLR062C YLR307C-AQ3E825 87 aa3.35□□□□□ -1.87
BUD28YLR062C CYT2Q00873 224 aa3.34□□□□□ -1.87
BUD28YLR062C LCL1Q02786 101 aa3.34□□□□□ -1.87
BUD28YLR062C YMR295CQ03559 197 aa3.34□□□□□ -1.87
BUD28YLR062C TPT1Q12272 230 aaKnown RBP3.34□□□□□ -1.87
BUD28YLR062C YMR175W-AQ3E766 64 aa3.34□□□□□ -1.87
BUD28YLR062C HMRA2P0CY13 119 aa3.33□□□□□ -1.88
BUD28YLR062C YGL118CP53132 145 aa3.33□□□□□ -1.88
BUD28YLR062C ZEO1Q08245 113 aa3.33□□□□□ -1.88
BUD28YLR062C COA3Q3E7B2 85 aa3.33□□□□□ -1.88
BUD28YLR062C YAL065CO13511 128 aa3.32□□□□□ -1.88
BUD28YLR062C GSP1P32835 219 aaKnown RBP3.32□□□□□ -1.88
BUD28YLR062C GSP2P32836 220 aaKnown RBP3.32□□□□□ -1.88
BUD28YLR062C GTT1P40582 234 aa3.32□□□□□ -1.88
BUD28YLR062C ERV14P53173 138 aa3.32□□□□□ -1.88
BUD28YLR062C YDR042CQ03205 200 aa3.32□□□□□ -1.88
BUD28YLR062C YLR112WQ12130 139 aa3.32□□□□□ -1.88
BUD28YLR062C APS1P35181 156 aa3.31□□□□□ -1.88
BUD28YLR062C YFL067WP43537 175 aa3.31□□□□□ -1.88
BUD28YLR062C YNL162W-AQ3E7A8 72 aa3.31□□□□□ -1.88
BUD28YLR062C YER175W-AQ8TGU4 54 aa3.31□□□□□ -1.88
BUD28YLR062C RPL31AP0C2H8 113 aaKnown RBP3.3□□□□□ -1.88
BUD28YLR062C ATP15P21306 62 aa3.3□□□□□ -1.88
BUD28YLR062C HOT13P36078 116 aa3.3□□□□□ -1.88
BUD28YLR062C PEX22P39718 180 aa3.3□□□□□ -1.88
BUD28YLR062C VTC1P40046 129 aaRIP-Chip data3.3□□□□□ -1.88not detected
BUD28YLR062C YER134CP40081 178 aa3.3□□□□□ -1.88
BUD28YLR062C CMC2Q3E7A4 109 aa3.3□□□□□ -1.88
BUD28YLR062C HTL1Q9URQ5 78 aa3.3□□□□□ -1.88
BUD28YLR062C RPL32P38061 130 aaKnown RBP3.29□□□□□ -1.88
BUD28YLR062C MMS2P53152 137 aa3.29□□□□□ -1.88
BUD28YLR062C YDL241WQ07738 123 aa3.29□□□□□ -1.88
BUD28YLR062C RPL27BP0C2H7 136 aaKnown RBP3.28□□□□□ -1.88
BUD28YLR062C COX14P39103 70 aa3.28□□□□□ -1.88
BUD28YLR062C POP3P53833 195 aaPredicted RBP3.28□□□□□ -1.88
BUD28YLR062C YMR103CQ04436 120 aa3.28□□□□□ -1.88
BUD28YLR062C ECM12O13529 151 aa3.27□□□□□ -1.89
BUD28YLR062C YKL070WP36087 169 aa3.27□□□□□ -1.89
BUD28YLR062C ARL3Q02804 198 aa3.27□□□□□ -1.89
BUD28YLR062C YGL041C-BQ3E750 60 aa3.27□□□□□ -1.89
BUD28YLR062C SHU1P38751 150 aa3.26□□□□□ -1.89
BUD28YLR062C AIM19P40502 157 aa3.26□□□□□ -1.89
BUD28YLR062C STF1P01098 86 aa3.25□□□□□ -1.89
BUD28YLR062C AQY2P0CD90 149 aa3.25□□□□□ -1.89
BUD28YLR062C DDR48P18899 430 aaKnown RBP3.25□□□□□ -1.89
BUD28YLR062C TOA2P32774 122 aa3.25□□□□□ -1.89
BUD28YLR062C PAU16P35994 123 aa3.25□□□□□ -1.89
BUD28YLR062C CWP2P43497 92 aa3.25□□□□□ -1.89
BUD28YLR062C AIM11P87275 137 aa3.25□□□□□ -1.89
BUD28YLR062C YDL022C-AP0C5L6 82 aa3.24□□□□□ -1.89
BUD28YLR062C FYV4P38783 130 aaPredicted RBP3.24□□□□□ -1.89
BUD28YLR062C OXA1P39952 402 aa3.24□□□□□ -1.89
BUD28YLR062C SMD1Q02260 146 aaPredicted RBP3.24□□□□□ -1.89
BUD28YLR062C PPT2Q12036 173 aa3.24□□□□□ -1.89
BUD28YLR062C RPF1P38805 295 aaKnown RBP3.23□□□□□ -1.89
BUD28YLR062C YBL112CQ3E7Y4 105 aa3.23□□□□□ -1.89
BUD28YLR062C ADH1P00330 348 aaKnown RBP3.22□□□□□ -1.89
BUD28YLR062C RPL18AP0CX49 186 aaKnown RBP3.22□□□□□ -1.89
BUD28YLR062C RPL18BP0CX50 186 aaKnown RBP3.22□□□□□ -1.89
BUD28YLR062C PEX17P40155 199 aa3.22□□□□□ -1.89
BUD28YLR062C YBL039W-BP0C268 59 aa3.21□□□□□ -1.9
BUD28YLR062C YKR041WP36134 250 aa3.21□□□□□ -1.9
BUD28YLR062C MVB12P42939 101 aa3.21□□□□□ -1.9
BUD28YLR062C YFL019CP43576 117 aa3.21□□□□□ -1.9
BUD28YLR062C IGD1P43598 195 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms