RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C YBR209WP38311 105 aa1.92□□□□□ -2.1
SDO1YLR022C SMD3P43321 101 aaKnown RBP1.92□□□□□ -2.1
SDO1YLR022C YMR253CQ04835 414 aa1.92□□□□□ -2.1
SDO1YLR022C CMC4Q3E7A9 73 aa1.92□□□□□ -2.1
SDO1YLR022C SHB17P36136 271 aaKnown RBP1.91□□□□□ -2.1
SDO1YLR022C ERV15P38312 142 aa1.91□□□□□ -2.1
SDO1YLR022C FYV4P38783 130 aaPredicted RBP1.91□□□□□ -2.1
SDO1YLR022C APS2Q00381 147 aa1.91□□□□□ -2.1
SDO1YLR022C SYM1Q06563 197 aa1.91□□□□□ -2.1
SDO1YLR022C RRT7Q07829 113 aa1.91□□□□□ -2.1
SDO1YLR022C ATP20Q12233 115 aa1.91□□□□□ -2.1
SDO1YLR022C YGL258W-AQ3E740 77 aa1.91□□□□□ -2.1
SDO1YLR022C MRP49P32388 137 aa1.9□□□□□ -2.11
SDO1YLR022C YNL217WP40152 326 aa1.9□□□□□ -2.11
SDO1YLR022C GLC8P41818 229 aa1.9□□□□□ -2.11
SDO1YLR022C CUE4Q04201 117 aaPredicted RBP1.9□□□□□ -2.11
SDO1YLR022C FYV12Q08559 129 aa1.9□□□□□ -2.11
SDO1YLR022C YNL277W-AQ3E7Z0 62 aa1.9□□□□□ -2.11
SDO1YLR022C FMP49A0A023PZB3 126 aa1.89□□□□□ -2.11
SDO1YLR022C KRE1P17260 313 aa1.89□□□□□ -2.11
SDO1YLR022C HSP12P22943 109 aaKnown RBP1.89□□□□□ -2.11
SDO1YLR022C FZF1P32805 299 aa1.89□□□□□ -2.11
SDO1YLR022C PAM17P36147 197 aa1.89□□□□□ -2.11
SDO1YLR022C EMC5P40540 141 aa1.89□□□□□ -2.11
SDO1YLR022C SPG1P50088 95 aa1.89□□□□□ -2.11
SDO1YLR022C MPC3P53311 146 aa1.89□□□□□ -2.11
SDO1YLR022C ATP19P81451 68 aa1.89□□□□□ -2.11
SDO1YLR022C ARL3Q02804 198 aa1.89□□□□□ -2.11
SDO1YLR022C LIP1Q03579 150 aa1.89□□□□□ -2.11
SDO1YLR022C YLR099W-AQ3E798 87 aa1.89□□□□□ -2.11
SDO1YLR022C YOR304C-AO14468 76 aa1.88□□□□□ -2.11
SDO1YLR022C YHR213WP0CI67 198 aa1.88□□□□□ -2.11
SDO1YLR022C YBR013CP38215 129 aa1.88□□□□□ -2.11
SDO1YLR022C DAD3P69850 94 aa1.88□□□□□ -2.11
SDO1YLR022C EST3Q03096 181 aa1.88□□□□□ -2.11
SDO1YLR022C CCW12Q12127 133 aa1.88□□□□□ -2.11
SDO1YLR022C YOR015WQ12169 119 aa1.88□□□□□ -2.11
SDO1YLR022C YIR021W-AQ3E739 70 aa1.88□□□□□ -2.11
SDO1YLR022C YLR236CA0A023PZG4 107 aa1.87□□□□□ -2.11
SDO1YLR022C RPL33AP05744 107 aaKnown RBP1.87□□□□□ -2.11
SDO1YLR022C AHT1P29589 182 aa1.87□□□□□ -2.11
SDO1YLR022C YHR022CP38763 256 aa1.87□□□□□ -2.11
SDO1YLR022C YJL144WP47009 104 aa1.87□□□□□ -2.11
SDO1YLR022C YAE1P47118 141 aaPredicted RBP1.87□□□□□ -2.11
SDO1YLR022C AIM11P87275 137 aa1.87□□□□□ -2.11
SDO1YLR022C YDR029WQ12111 104 aa1.87□□□□□ -2.11
SDO1YLR022C SPT14P32363 452 aa1.86□□□□□ -2.11
SDO1YLR022C IMP2P46972 177 aa1.86□□□□□ -2.11
SDO1YLR022C YNR077CP53758 84 aa1.86□□□□□ -2.11
SDO1YLR022C EMC6Q12431 108 aa1.86□□□□□ -2.11
SDO1YLR022C YOR381W-AQ3E804 55 aa1.86□□□□□ -2.11
SDO1YLR022C GSP2P32836 220 aaKnown RBP1.85□□□□□ -2.11
SDO1YLR022C YHR140WP38842 239 aa1.85□□□□□ -2.11
SDO1YLR022C AIM19P40502 157 aa1.85□□□□□ -2.11
SDO1YLR022C YML079WQ03629 201 aa1.85□□□□□ -2.11
SDO1YLR022C UPS3Q04006 179 aa1.85□□□□□ -2.11
SDO1YLR022C ANT1Q06497 328 aa1.85□□□□□ -2.11
SDO1YLR022C FCF2Q12035 217 aaPredicted RBP1.85□□□□□ -2.11
SDO1YLR022C KTI11Q3E840 82 aa1.85□□□□□ -2.11
SDO1YLR022C YPR010C-AA5Z2X5 72 aa1.84□□□□□ -2.11
SDO1YLR022C SEC11P15367 167 aa1.84□□□□□ -2.11
SDO1YLR022C EMP24P32803 203 aaKnown RBP1.84□□□□□ -2.11
SDO1YLR022C SFT1P43682 97 aa1.84□□□□□ -2.11
SDO1YLR022C LSM8P47093 109 aaKnown RBP1.84□□□□□ -2.11
SDO1YLR022C YJR146WP47174 117 aa1.84□□□□□ -2.11
SDO1YLR022C THG1P53215 237 aaKnown RBP1.84□□□□□ -2.11
SDO1YLR022C ELC1Q03071 99 aa1.84□□□□□ -2.11
SDO1YLR022C YLR042CQ07990 161 aa1.84□□□□□ -2.11
SDO1YLR022C YLR118CQ12354 227 aa1.84□□□□□ -2.11
SDO1YLR022C YPR145C-AQ2V2P0 78 aa1.84□□□□□ -2.11
SDO1YLR022C SPS2P08459 502 aa1.83□□□□□ -2.12
SDO1YLR022C UGX2P32772 223 aa1.83□□□□□ -2.12
SDO1YLR022C RPL14AP36105 138 aaKnown RBP1.83□□□□□ -2.12
SDO1YLR022C RPL14BP38754 138 aaKnown RBP1.83□□□□□ -2.12
SDO1YLR022C KNH1P50112 268 aa1.83□□□□□ -2.12
SDO1YLR022C YGL149WP53116 101 aa1.83□□□□□ -2.12
SDO1YLR022C DAD4P69851 72 aa1.83□□□□□ -2.12
SDO1YLR022C TMA23Q03525 211 aa1.83□□□□□ -2.12
SDO1YLR022C ATG41Q12048 136 aa1.83□□□□□ -2.12
SDO1YLR022C YKL068W-AQ3E826 78 aa1.83□□□□□ -2.12
SDO1YLR022C SCS22Q6Q595 175 aa1.83□□□□□ -2.12
SDO1YLR022C DDI2P0CH63 225 aa1.82□□□□□ -2.12
SDO1YLR022C DDI3P0CH64 225 aa1.82□□□□□ -2.12
SDO1YLR022C FPR2P32472 135 aa1.82□□□□□ -2.12
SDO1YLR022C POP3P53833 195 aaPredicted RBP1.82□□□□□ -2.12
SDO1YLR022C SAE3P89114 91 aa1.82□□□□□ -2.12
SDO1YLR022C RUB1Q03919 77 aa1.82□□□□□ -2.12
SDO1YLR022C VAR1P02381 398 aa1.81□□□□□ -2.12
SDO1YLR022C SFT2P38166 215 aa1.81□□□□□ -2.12
SDO1YLR022C DSE2P38844 325 aa1.81□□□□□ -2.12
SDO1YLR022C PHS1P40857 217 aa1.81□□□□□ -2.12
SDO1YLR022C NSE4P43124 402 aa1.81□□□□□ -2.12
SDO1YLR022C ERI1P62651 68 aaKnown RBP1.81□□□□□ -2.12
SDO1YLR022C CYT2Q00873 224 aa1.81□□□□□ -2.12
SDO1YLR022C TVP18Q04767 167 aa1.81□□□□□ -2.12
SDO1YLR022C YHR007C-AQ07074 71 aa1.81□□□□□ -2.12
SDO1YLR022C SCP1Q08873 200 aa1.81□□□□□ -2.12
SDO1YLR022C INO4P13902 151 aa1.8□□□□□ -2.12
SDO1YLR022C RPB11P38902 120 aa1.8□□□□□ -2.12
SDO1YLR022C YGR269WP40326 108 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms