RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W PAU19P0CE85 124 aa1.55□□□□□ -2.16
CTK1YKL139W PAU3P25610 124 aa1.55□□□□□ -2.16
CTK1YKL139W YGR240C-AQ3E786 66 aa1.55□□□□□ -2.16
CTK1YKL139W HMRA2P0CY13 119 aa1.55□□□□□ -2.16
CTK1YKL139W YGL041C-BQ3E750 60 aa1.55□□□□□ -2.16
CTK1YKL139W YMR103CQ04436 120 aa1.54□□□□□ -2.16
CTK1YKL139W BUD23P25627 275 aaPredicted RBP1.53□□□□□ -2.16
CTK1YKL139W SWC7Q06707 132 aa1.53□□□□□ -2.16
CTK1YKL139W VMA21P41806 77 aa1.52□□□□□ -2.17
CTK1YKL139W LYS2P07702 1392 aa1.52□□□□□ -2.17
CTK1YKL139W YBR090CP38253 122 aa1.51□□□□□ -2.17
CTK1YKL139W MIC10Q96VH5 97 aa1.51□□□□□ -2.17
CTK1YKL139W UBC5P15732 148 aa1.51□□□□□ -2.17
CTK1YKL139W MRPS12P53732 153 aa1.51□□□□□ -2.17
CTK1YKL139W YOS1Q3E834 85 aa1.51□□□□□ -2.17
CTK1YKL139W VPS55P47111 140 aa1.5□□□□□ -2.17
CTK1YKL139W YPK9Q12697 1472 aa1.49□□□□□ -2.17
CTK1YKL139W YER188C-AP0C0V2 99 aa1.49□□□□□ -2.17
CTK1YKL139W PAU16P35994 123 aa1.49□□□□□ -2.17
CTK1YKL139W PAU15P40585 124 aa1.49□□□□□ -2.17
CTK1YKL139W LCL1Q02786 101 aa1.49□□□□□ -2.17
CTK1YKL139W FYV7Q12247 151 aa1.49□□□□□ -2.17
CTK1YKL139W SEC16P48415 2195 aaKnown RBP1.49□□□□□ -2.17
CTK1YKL139W UBC4P15731 148 aa1.48□□□□□ -2.17
CTK1YKL139W YMR090WQ04304 227 aaKnown RBP1.48□□□□□ -2.17
CTK1YKL139W YRF1-3P0CX14 1859 aa1.48□□□□□ -2.17
CTK1YKL139W YRF1-7P0CX15 1859 aa1.48□□□□□ -2.17
CTK1YKL139W YCR101CP25607 182 aa1.47□□□□□ -2.17
CTK1YKL139W YMR321CQ04898 105 aa1.47□□□□□ -2.17
CTK1YKL139W YLR419WQ06698 1435 aaKnown RBP1.47□□□□□ -2.17
CTK1YKL139W SSK2P53599 1579 aa1.47□□□□□ -2.17
CTK1YKL139W YJR128WP47162 119 aa1.47□□□□□ -2.17
CTK1YKL139W LSM6Q06406 86 aaKnown RBP1.47□□□□□ -2.17
CTK1YKL139W YOR034C-AQ3E735 80 aa1.47□□□□□ -2.17
CTK1YKL139W SEN1Q00416 2231 aaKnown RBP1.46□□□□□ -2.18
CTK1YKL139W YCL048W-AQ2V2Q2 79 aa1.46□□□□□ -2.18
CTK1YKL139W KRE5P22023 1365 aa1.46□□□□□ -2.18
CTK1YKL139W BUD4P47136 1447 aa1.46□□□□□ -2.18
CTK1YKL139W RPL43AP0CX25 92 aaKnown RBP1.45□□□□□ -2.18
CTK1YKL139W RPL43BP0CX26 92 aa1.45□□□□□ -2.18
CTK1YKL139W TY1B-HO13535 1793 aa1.44□□□□□ -2.18
CTK1YKL139W YHR138CP38841 114 aaPredicted RBP1.44□□□□□ -2.18
CTK1YKL139W DYN1P36022 4092 aa1.44□□□□□ -2.18
CTK1YKL139W TRA1P38811 3744 aa1.44□□□□□ -2.18
CTK1YKL139W TY3B-IQ7LHG5 1498 aaKnown RBP1.43□□□□□ -2.18
CTK1YKL139W TY1B-DR4Q07793 1604 aa1.43□□□□□ -2.18
CTK1YKL139W PDR11P40550 1411 aa1.43□□□□□ -2.18
CTK1YKL139W GEA1P47102 1408 aaPredicted RBP1.42□□□□□ -2.18
CTK1YKL139W LAA1P39526 2014 aa1.42□□□□□ -2.18
CTK1YKL139W YOL118CQ08259 102 aa1.42□□□□□ -2.18
CTK1YKL139W TY3B-GQ99315 1547 aa1.41□□□□□ -2.18
CTK1YKL139W CSF1Q12150 2958 aa1.41□□□□□ -2.18
CTK1YKL139W PDR10P51533 1564 aa1.4□□□□□ -2.18
CTK1YKL139W CAT8P39113 1433 aa1.4□□□□□ -2.19
CTK1YKL139W CCW14O13547 238 aa1.39□□□□□ -2.19
CTK1YKL139W MIX14Q04341 121 aa1.39□□□□□ -2.19
CTK1YKL139W KSH1Q8TGJ3 72 aa1.39□□□□□ -2.19
CTK1YKL139W YLR255CO13574 117 aa1.38□□□□□ -2.19
CTK1YKL139W SRB6P32570 121 aa1.38□□□□□ -2.19
CTK1YKL139W YLR307C-AQ3E825 87 aa1.38□□□□□ -2.19
CTK1YKL139W SSN2P38931 1420 aa1.38□□□□□ -2.19
CTK1YKL139W IMP2P46972 177 aa1.38□□□□□ -2.19
CTK1YKL139W RKR1Q04781 1562 aa1.38□□□□□ -2.19
CTK1YKL139W SEC7P11075 2009 aaKnown RBP1.37□□□□□ -2.19
CTK1YKL139W YLR157W-EP0CF00 54 aa1.37□□□□□ -2.19
CTK1YKL139W RSM19P53733 91 aaPredicted RBP1.37□□□□□ -2.19
CTK1YKL139W YDR210WQ03482 75 aa1.37□□□□□ -2.19
CTK1YKL139W YPL225WQ08971 146 aaKnown RBP1.36□□□□□ -2.19
CTK1YKL139W TOP2P06786 1428 aaKnown RBP1.35□□□□□ -2.19
CTK1YKL139W SNF2P22082 1703 aa1.35□□□□□ -2.19
CTK1YKL139W USO1P25386 1790 aa1.35□□□□□ -2.19
CTK1YKL139W PAU5P43575 122 aa1.34□□□□□ -2.19
CTK1YKL139W ZEO1Q08245 113 aa1.34□□□□□ -2.19
CTK1YKL139W MEC1P38111 2368 aa1.34□□□□□ -2.19
CTK1YKL139W POL1P13382 1468 aa1.34□□□□□ -2.2
CTK1YKL139W YCR095W-AQ3E787 52 aa1.34□□□□□ -2.2
CTK1YKL139W YPL038W-AQ3E7B4 63 aa1.34□□□□□ -2.2
CTK1YKL139W YDR034W-BQ6Q5X2 51 aa1.34□□□□□ -2.2
CTK1YKL139W URB1P34241 1764 aaKnown RBP1.33□□□□□ -2.2
CTK1YKL139W URA2P07259 2214 aaKnown RBP1.33□□□□□ -2.2
CTK1YKL139W AUA1P32450 94 aa1.32□□□□□ -2.2
CTK1YKL139W YIL086CP40503 102 aa1.31□□□□□ -2.2
CTK1YKL139W YOR289WQ12012 251 aaPredicted RBP1.31□□□□□ -2.2
CTK1YKL139W GCN2P15442 1659 aa1.31□□□□□ -2.2
CTK1YKL139W ROX3P25046 220 aa1.3□□□□□ -2.2
CTK1YKL139W CHC1P22137 1653 aaKnown RBP1.3□□□□□ -2.2
CTK1YKL139W DOP1Q03921 1698 aa1.3□□□□□ -2.2
CTK1YKL139W HAP1P0CE41 1502 aa1.3□□□□□ -2.2
CTK1YKL139W YRF1-6P53819 1859 aa1.3□□□□□ -2.2
CTK1YKL139W SMC4Q12267 1418 aa1.3□□□□□ -2.2
CTK1YKL139W SHU1P38751 150 aa1.3□□□□□ -2.2
CTK1YKL139W GCV3P39726 170 aaPredicted RBP1.3□□□□□ -2.2
CTK1YKL139W DNF3Q12674 1656 aa1.29□□□□□ -2.2
CTK1YKL139W YHL005CP38752 130 aa1.29□□□□□ -2.2
CTK1YKL139W COX12Q01519 83 aa1.29□□□□□ -2.2
CTK1YKL139W SNA2P56508 79 aa1.28□□□□□ -2.2
CTK1YKL139W RRT15Q3E811 62 aa1.28□□□□□ -2.2
CTK1YKL139W HMRA1P0CY11 126 aa1.27□□□□□ -2.21
CTK1YKL139W COX19Q3E731 98 aa1.27□□□□□ -2.21
CTK1YKL139W SRB8P25648 1427 aa1.27□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 70.2 ms