RNA–Protein interactions for RNA: YJR001W

AVT1, Transcript of Vacuolar transporter, yeastyeast

Gene AVT1, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT1YJR001W YAR068WP39564 161 aa3.44□□□□□ -1.86
AVT1YJR001W YDR102CQ03864 110 aa3.44□□□□□ -1.86
AVT1YJR001W ICY1Q04329 127 aa3.43□□□□□ -1.86
AVT1YJR001W YOR015WQ12169 119 aa3.43□□□□□ -1.86
AVT1YJR001W RPL21BQ12672 160 aaKnown RBP3.43□□□□□ -1.86
AVT1YJR001W YLR156WP0CE96 114 aa3.42□□□□□ -1.86
AVT1YJR001W YLR159WP0CE97 114 aa3.42□□□□□ -1.86
AVT1YJR001W YLR161WP0CE98 114 aa3.42□□□□□ -1.86
AVT1YJR001W ATP15P21306 62 aa3.42□□□□□ -1.86
AVT1YJR001W RSM18P40033 138 aa3.42□□□□□ -1.86
AVT1YJR001W PIR1Q03178 341 aa3.42□□□□□ -1.86
AVT1YJR001W YMR295CQ03559 197 aa3.42□□□□□ -1.86
AVT1YJR001W YMR244WQ04018 355 aa3.42□□□□□ -1.86
AVT1YJR001W SMT3Q12306 101 aaKnown RBP3.42□□□□□ -1.86
AVT1YJR001W FZF1P32805 299 aa3.42□□□□□ -1.86
AVT1YJR001W STT4P37297 1900 aa3.41□□□□□ -1.86
AVT1YJR001W VTC1P40046 129 aaRIP-Chip data3.41□□□□□ -1.86not detected
AVT1YJR001W YHP1Q04116 353 aa3.41□□□□□ -1.86
AVT1YJR001W LSM6Q06406 86 aaKnown RBP3.41□□□□□ -1.86
AVT1YJR001W CRC1Q12289 327 aa3.41□□□□□ -1.86
AVT1YJR001W MDM35O60200 86 aa3.4□□□□□ -1.86
AVT1YJR001W SDH3P33421 198 aa3.4□□□□□ -1.86
AVT1YJR001W ICS3P47034 131 aa3.4□□□□□ -1.86
AVT1YJR001W RNQ1P25367 405 aa3.4□□□□□ -1.87
AVT1YJR001W FYV5P25585 152 aa3.4□□□□□ -1.87
AVT1YJR001W YFL067WP43537 175 aa3.4□□□□□ -1.87
AVT1YJR001W RPL21AQ02753 160 aaKnown RBP3.4□□□□□ -1.87
AVT1YJR001W YOR268CQ08734 132 aa3.4□□□□□ -1.87
AVT1YJR001W MRPL31P14063 131 aaPredicted RBP3.39□□□□□ -1.87
AVT1YJR001W CIS3P47001 227 aa3.39□□□□□ -1.87
AVT1YJR001W TAO3P40468 2376 aa3.39□□□□□ -1.87
AVT1YJR001W PAU2P32612 120 aa3.38□□□□□ -1.87
AVT1YJR001W YHL005CP38752 130 aa3.38□□□□□ -1.87
AVT1YJR001W YDR274CP87283 123 aa3.38□□□□□ -1.87
AVT1YJR001W FYV12Q08559 129 aa3.38□□□□□ -1.87
AVT1YJR001W YKL018C-AQ3E7A7 99 aa3.38□□□□□ -1.87
AVT1YJR001W TIM9O74700 87 aa3.37□□□□□ -1.87
AVT1YJR001W YER187WP40102 141 aa3.37□□□□□ -1.87
AVT1YJR001W VPS55P47111 140 aa3.37□□□□□ -1.87
AVT1YJR001W PBA1Q05778 276 aa3.37□□□□□ -1.87
AVT1YJR001W YAR023CD6VPM8 179 aa3.37□□□□□ -1.87
AVT1YJR001W YHR214C-DP0CX93 97 aa3.37□□□□□ -1.87
AVT1YJR001W IGO1P53897 168 aa3.37□□□□□ -1.87
AVT1YJR001W API2Q04413 109 aa3.37□□□□□ -1.87
AVT1YJR001W YDR115WQ04598 105 aa3.37□□□□□ -1.87
AVT1YJR001W ECM19Q06011 112 aa3.37□□□□□ -1.87
AVT1YJR001W RPL26AP05743 127 aaKnown RBP3.36□□□□□ -1.87
AVT1YJR001W QCR10P37299 77 aa3.36□□□□□ -1.87
AVT1YJR001W YHR180WP38868 163 aa3.36□□□□□ -1.87
AVT1YJR001W PAU12P53343 120 aa3.36□□□□□ -1.87
AVT1YJR001W MET31Q03081 177 aa3.36□□□□□ -1.87
AVT1YJR001W MHF2Q3E829 80 aa3.36□□□□□ -1.87
AVT1YJR001W YCR043CP25361 127 aa3.35□□□□□ -1.87
AVT1YJR001W YGL118CP53132 145 aa3.35□□□□□ -1.87
AVT1YJR001W LIP1Q03579 150 aa3.35□□□□□ -1.87
AVT1YJR001W FPR2P32472 135 aa3.35□□□□□ -1.87
AVT1YJR001W TIM12P32830 109 aa3.35□□□□□ -1.87
AVT1YJR001W SOD1P00445 154 aaKnown RBP3.34□□□□□ -1.87
AVT1YJR001W FPR1P20081 114 aaKnown RBP3.34□□□□□ -1.87
AVT1YJR001W PAU24P38155 120 aa3.34□□□□□ -1.87
AVT1YJR001W IMP2P46972 177 aa3.34□□□□□ -1.87
AVT1YJR001W MIX17Q03667 156 aa3.34□□□□□ -1.87
AVT1YJR001W MRPS8Q03799 155 aa3.34□□□□□ -1.87
AVT1YJR001W ATP20Q12233 115 aa3.34□□□□□ -1.87
AVT1YJR001W YLR146W-AQ2V2P1 62 aa3.34□□□□□ -1.87
AVT1YJR001W YSY6P38374 65 aa3.33□□□□□ -1.88
AVT1YJR001W LST8P41318 303 aa3.33□□□□□ -1.88
AVT1YJR001W ATP19P81451 68 aa3.33□□□□□ -1.88
AVT1YJR001W SOM1Q05676 74 aa3.33□□□□□ -1.88
AVT1YJR001W YOL118CQ08259 102 aa3.33□□□□□ -1.88
AVT1YJR001W YPL261CQ08976 102 aa3.33□□□□□ -1.88
AVT1YJR001W YOR343CQ12484 108 aa3.33□□□□□ -1.88
AVT1YJR001W YER078W-AQ3E7A2 54 aa3.33□□□□□ -1.88
AVT1YJR001W PAU1P0CE88 120 aa3.33□□□□□ -1.88
AVT1YJR001W PAU14P0CE89 120 aa3.33□□□□□ -1.88
AVT1YJR001W PAU6P0CE90 120 aa3.33□□□□□ -1.88
AVT1YJR001W PAU18P0CE91 120 aa3.33□□□□□ -1.88
AVT1YJR001W PAU8P0CE92 120 aa3.33□□□□□ -1.88
AVT1YJR001W PAU11P0CE93 120 aa3.33□□□□□ -1.88
AVT1YJR001W ROX3P25046 220 aa3.33□□□□□ -1.88
AVT1YJR001W PAU13P38725 120 aa3.33□□□□□ -1.88
AVT1YJR001W YEL073CP39974 107 aa3.33□□□□□ -1.88
AVT1YJR001W BRP1P53194 125 aa3.33□□□□□ -1.88
AVT1YJR001W PAU10Q03050 120 aa3.33□□□□□ -1.88
AVT1YJR001W YOL029CQ08187 201 aa3.33□□□□□ -1.88
AVT1YJR001W PAU20Q08322 120 aa3.33□□□□□ -1.88
AVT1YJR001W PAU9Q3E770 120 aa3.33□□□□□ -1.88
AVT1YJR001W RPS22BQ3E7Y3 130 aaKnown RBP3.33□□□□□ -1.88
AVT1YJR001W YBL059WP34224 193 aa3.32□□□□□ -1.88
AVT1YJR001W ECO1P43605 281 aa3.32□□□□□ -1.88
AVT1YJR001W PAU4P53427 120 aa3.32□□□□□ -1.88
AVT1YJR001W IRC23Q08416 157 aa3.32□□□□□ -1.88
AVT1YJR001W PPT2Q12036 173 aa3.32□□□□□ -1.88
AVT1YJR001W YOR381W-AQ3E804 55 aa3.32□□□□□ -1.88
AVT1YJR001W YPR096CO13587 100 aa3.31□□□□□ -1.88
AVT1YJR001W YHR173CP38864 112 aa3.31□□□□□ -1.88
AVT1YJR001W ARC15P40518 154 aaRIP-Chip data3.31□□□□□ -1.88 RIP-Chip
AVT1YJR001W SRL1Q08673 210 aa3.31□□□□□ -1.88
AVT1YJR001W VPS68Q12016 184 aa3.31□□□□□ -1.88
AVT1YJR001W YOR314WQ12506 109 aa3.31□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms