RNA–Protein interactions for RNA: YJL197W

UBP12, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP12, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP12YJL197W SNN1P48232 102 aa2.35□□□□□ -2.03
UBP12YJL197W RGM1Q00453 211 aa2.35□□□□□ -2.03
UBP12YJL197W IQG1Q12280 1495 aa2.35□□□□□ -2.03
UBP12YJL197W PDR10P51533 1564 aa2.35□□□□□ -2.03
UBP12YJL197W PCC1Q3E833 88 aa2.35□□□□□ -2.03
UBP12YJL197W BCK1Q01389 1478 aa2.35□□□□□ -2.03
UBP12YJL197W YLR194CQ05777 254 aa2.35□□□□□ -2.03
UBP12YJL197W YBR219CP38317 127 aa2.34□□□□□ -2.03
UBP12YJL197W RPL13BP40212 199 aaKnown RBP2.34□□□□□ -2.03
UBP12YJL197W RPL22BP56628 122 aaKnown RBP2.34□□□□□ -2.03
UBP12YJL197W YIL014C-AQ02598 104 aa2.34□□□□□ -2.03
UBP12YJL197W SNQ2P32568 1501 aaKnown RBP2.34□□□□□ -2.04
UBP12YJL197W YHR213WP0CI67 198 aa2.33□□□□□ -2.04
UBP12YJL197W YBR242WP38331 238 aa2.33□□□□□ -2.04
UBP12YJL197W NUP188P52593 1655 aaKnown RBP2.33□□□□□ -2.04
UBP12YJL197W PAU2P32612 120 aa2.33□□□□□ -2.04
UBP12YJL197W YNL146C-AQ3E7Z1 64 aa2.33□□□□□ -2.04
UBP12YJL197W KSH1Q8TGJ3 72 aa2.33□□□□□ -2.04
UBP12YJL197W VMR1P38735 1592 aa2.33□□□□□ -2.04
UBP12YJL197W YBT1P32386 1661 aa2.33□□□□□ -2.04
UBP12YJL197W YEL008WP40001 126 aa2.33□□□□□ -2.04
UBP12YJL197W PAU19P0CE85 124 aa2.32□□□□□ -2.04
UBP12YJL197W PAU3P25610 124 aa2.32□□□□□ -2.04
UBP12YJL197W QCR8P08525 94 aa2.32□□□□□ -2.04
UBP12YJL197W FPR1P20081 114 aaKnown RBP2.32□□□□□ -2.04
UBP12YJL197W YGL194C-AQ2V2P6 80 aa2.32□□□□□ -2.04
UBP12YJL197W COA3Q3E7B2 85 aa2.32□□□□□ -2.04
UBP12YJL197W SNU13P39990 126 aaKnown RBP2.32□□□□□ -2.04
UBP12YJL197W NHP10Q03435 203 aa2.32□□□□□ -2.04
UBP12YJL197W FIT3Q08907 204 aa2.32□□□□□ -2.04
UBP12YJL197W YGL014C-AP0C5N1 53 aa2.31□□□□□ -2.04
UBP12YJL197W EMC5P40540 141 aa2.31□□□□□ -2.04
UBP12YJL197W SCP1Q08873 200 aa2.31□□□□□ -2.04
UBP12YJL197W YDR029WQ12111 104 aa2.31□□□□□ -2.04
UBP12YJL197W PFY1P07274 126 aa2.31□□□□□ -2.04
UBP12YJL197W SRX1P36077 127 aa2.31□□□□□ -2.04
UBP12YJL197W YBR027CP38220 110 aa2.31□□□□□ -2.04
UBP12YJL197W MSL1P40567 111 aaPredicted RBP2.31□□□□□ -2.04
UBP12YJL197W VAM10Q08474 114 aa2.31□□□□□ -2.04
UBP12YJL197W RPL33AP05744 107 aaKnown RBP2.31□□□□□ -2.04
UBP12YJL197W PAU24P38155 120 aa2.31□□□□□ -2.04
UBP12YJL197W SED1Q01589 338 aa2.31□□□□□ -2.04
UBP12YJL197W TY3B-IQ7LHG5 1498 aaKnown RBP2.31□□□□□ -2.04
UBP12YJL197W YJL197C-AP0C5P0 93 aa2.3□□□□□ -2.04
UBP12YJL197W MIX14Q04341 121 aa2.3□□□□□ -2.04
UBP12YJL197W YHR086W-AQ3E746 53 aa2.3□□□□□ -2.04
UBP12YJL197W YKL068W-AQ3E826 78 aa2.3□□□□□ -2.04
UBP12YJL197W SEN15Q04675 128 aa2.3□□□□□ -2.04
UBP12YJL197W POL1P13382 1468 aa2.3□□□□□ -2.04
UBP12YJL197W SRB6P32570 121 aa2.3□□□□□ -2.04
UBP12YJL197W LST8P41318 303 aa2.29□□□□□ -2.04
UBP12YJL197W COX23P38824 151 aa2.29□□□□□ -2.04
UBP12YJL197W YFL065CP43539 102 aa2.29□□□□□ -2.04
UBP12YJL197W YMR122CQ03879 124 aa2.29□□□□□ -2.04
UBP12YJL197W PAU16P35994 123 aa2.28□□□□□ -2.04
UBP12YJL197W PAU15P40585 124 aa2.28□□□□□ -2.04
UBP12YJL197W RSF2P46974 1380 aa2.28□□□□□ -2.04
UBP12YJL197W RSM19P53733 91 aaPredicted RBP2.28□□□□□ -2.04
UBP12YJL197W YLR363W-AQ3E747 85 aa2.28□□□□□ -2.04
UBP12YJL197W HMRA2P0CY13 119 aa2.27□□□□□ -2.05
UBP12YJL197W CYB5P40312 120 aa2.27□□□□□ -2.05
UBP12YJL197W SEC7P11075 2009 aaKnown RBP2.27□□□□□ -2.05
UBP12YJL197W SUS1Q6WNK7 96 aa2.27□□□□□ -2.05
UBP12YJL197W YHR138CP38841 114 aaPredicted RBP2.26□□□□□ -2.05
UBP12YJL197W PRM3Q08931 133 aa2.26□□□□□ -2.05
UBP12YJL197W ECM12O13529 151 aa2.26□□□□□ -2.05
UBP12YJL197W YCL042WP25572 119 aa2.26□□□□□ -2.05
UBP12YJL197W RPL22AP05749 121 aaKnown RBP2.25□□□□□ -2.05
UBP12YJL197W POR2P40478 281 aa2.25□□□□□ -2.05
UBP12YJL197W YIR020CP40575 100 aa2.25□□□□□ -2.05
UBP12YJL197W HMRA1P0CY11 126 aa2.25□□□□□ -2.05
UBP12YJL197W AIM4P38305 123 aaPredicted RBP2.25□□□□□ -2.05
UBP12YJL197W IRC21Q04772 201 aa2.25□□□□□ -2.05
UBP12YJL197W COA4Q05809 96 aa2.25□□□□□ -2.05
UBP12YJL197W YPR203WQ08994 102 aa2.25□□□□□ -2.05
UBP12YJL197W YLR285C-AQ3E771 56 aa2.24□□□□□ -2.05
UBP12YJL197W GCN2P15442 1659 aa2.23□□□□□ -2.05
UBP12YJL197W YIL163CP40448 117 aa2.22□□□□□ -2.05
UBP12YJL197W YSF3P0C074 85 aaPredicted RBP2.21□□□□□ -2.06
UBP12YJL197W GCV3P39726 170 aaPredicted RBP2.21□□□□□ -2.06
UBP12YJL197W YMR321CQ04898 105 aa2.21□□□□□ -2.06
UBP12YJL197W ENV10Q99382 181 aa2.21□□□□□ -2.06
UBP12YJL197W FAB1P34756 2278 aa2.21□□□□□ -2.06
UBP12YJL197W RIF1P29539 1916 aa2.21□□□□□ -2.06
UBP12YJL197W LSM6Q06406 86 aaKnown RBP2.21□□□□□ -2.06
UBP12YJL197W YLR419WQ06698 1435 aaKnown RBP2.2□□□□□ -2.06
UBP12YJL197W YHL005CP38752 130 aa2.2□□□□□ -2.06
UBP12YJL197W YMR082CQ04276 118 aa2.2□□□□□ -2.06
UBP12YJL197W RRT15Q3E811 62 aa2.2□□□□□ -2.06
UBP12YJL197W YRF1-3P0CX14 1859 aa2.2□□□□□ -2.06
UBP12YJL197W YRF1-7P0CX15 1859 aa2.2□□□□□ -2.06
UBP12YJL197W YRF1-6P53819 1859 aa2.2□□□□□ -2.06
UBP12YJL197W PAU5P43575 122 aa2.19□□□□□ -2.06
UBP12YJL197W ROM2P51862 1356 aaKnown RBP2.19□□□□□ -2.06
UBP12YJL197W YGL041C-BQ3E750 60 aa2.19□□□□□ -2.06
UBP12YJL197W RSM18P40033 138 aa2.18□□□□□ -2.06
UBP12YJL197W YCL048W-AQ2V2Q2 79 aa2.18□□□□□ -2.06
UBP12YJL197W PDR5P33302 1511 aaKnown RBP2.18□□□□□ -2.06
UBP12YJL197W RPS22AP0C0W1 130 aaKnown RBP2.18□□□□□ -2.06
UBP12YJL197W YHL037CP38733 133 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms