RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C CGR1P53188 120 aa2.44□□□□□ -2.02
VPS53YJL029C LCL2Q08045 131 aa2.44□□□□□ -2.02
VPS53YJL029C ENV10Q99382 181 aa2.44□□□□□ -2.02
VPS53YJL029C YPT53P36019 220 aa2.44□□□□□ -2.02
VPS53YJL029C HOT13P36078 116 aa2.44□□□□□ -2.02
VPS53YJL029C SEC72P39742 193 aaKnown RBP2.44□□□□□ -2.02
VPS53YJL029C VMA21P41806 77 aa2.44□□□□□ -2.02
VPS53YJL029C ZEO1Q08245 113 aa2.44□□□□□ -2.02
VPS53YJL029C FSF1Q12029 327 aaKnown RBP2.44□□□□□ -2.02
VPS53YJL029C ATG8P38182 117 aaRIP-Chip data2.43□□□□□ -2.02not detected
VPS53YJL029C FCF1Q05498 189 aaPredicted RBP2.43□□□□□ -2.02
VPS53YJL029C YLR194CQ05777 254 aa2.43□□□□□ -2.02
VPS53YJL029C YLR112WQ12130 139 aa2.43□□□□□ -2.02
VPS53YJL029C YMR175W-AQ3E766 64 aa2.43□□□□□ -2.02
VPS53YJL029C RPL23AP0CX41 137 aaKnown RBP2.43□□□□□ -2.02
VPS53YJL029C RPL23BP0CX42 137 aaKnown RBP2.43□□□□□ -2.02
VPS53YJL029C SVP26P38869 228 aa2.43□□□□□ -2.02
VPS53YJL029C YJR146WP47174 117 aa2.43□□□□□ -2.02
VPS53YJL029C YDL241WQ07738 123 aa2.43□□□□□ -2.02
VPS53YJL029C YAR023CD6VPM8 179 aa2.42□□□□□ -2.02
VPS53YJL029C YDR034C-AP0C289 58 aa2.42□□□□□ -2.02
VPS53YJL029C CDC43P18898 376 aa2.42□□□□□ -2.02
VPS53YJL029C YKR032WP36127 104 aa2.42□□□□□ -2.02
VPS53YJL029C YOR008C-AQ3E7B9 74 aa2.42□□□□□ -2.02
VPS53YJL029C TOA2P32774 122 aa2.42□□□□□ -2.02
VPS53YJL029C PAM17P36147 197 aa2.42□□□□□ -2.02
VPS53YJL029C CMC2Q3E7A4 109 aa2.42□□□□□ -2.02
VPS53YJL029C YCR007CP25354 239 aa2.41□□□□□ -2.02
VPS53YJL029C YGL118CP53132 145 aa2.41□□□□□ -2.02
VPS53YJL029C LCL1Q02786 101 aa2.41□□□□□ -2.02
VPS53YJL029C PKR1Q03880 122 aaKnown RBP2.41□□□□□ -2.02
VPS53YJL029C ADH2P00331 348 aaKnown RBP2.41□□□□□ -2.02
VPS53YJL029C YIL059CP40520 121 aa2.41□□□□□ -2.02
VPS53YJL029C CIN5P40917 295 aa2.41□□□□□ -2.02
VPS53YJL029C YDR029WQ12111 104 aa2.41□□□□□ -2.02
VPS53YJL029C HTL1Q9URQ5 78 aa2.41□□□□□ -2.02
VPS53YJL029C PET8P38921 284 aa2.4□□□□□ -2.03
VPS53YJL029C YCR024C-BQ3E7Z8 88 aa2.4□□□□□ -2.03
VPS53YJL029C RRT15Q3E811 62 aa2.4□□□□□ -2.03
VPS53YJL029C APS1P35181 156 aa2.4□□□□□ -2.03
VPS53YJL029C GTT1P40582 234 aa2.4□□□□□ -2.03
VPS53YJL029C WIP1Q2V2P8 89 aa2.4□□□□□ -2.03
VPS53YJL029C SEC4P07560 215 aaKnown RBP2.39□□□□□ -2.03
VPS53YJL029C AIM29P36154 155 aa2.39□□□□□ -2.03
VPS53YJL029C YEL008WP40001 126 aa2.39□□□□□ -2.03
VPS53YJL029C LSM8P47093 109 aaKnown RBP2.39□□□□□ -2.03
VPS53YJL029C ERV14P53173 138 aa2.39□□□□□ -2.03
VPS53YJL029C YDR042CQ03205 200 aa2.39□□□□□ -2.03
VPS53YJL029C YCL021W-AQ96VH3 125 aa2.39□□□□□ -2.03
VPS53YJL029C POR1P04840 283 aaKnown RBP2.39□□□□□ -2.03
VPS53YJL029C VTC1P40046 129 aaRIP-Chip data2.39□□□□□ -2.03not detected
VPS53YJL029C YIL014C-AQ02598 104 aa2.39□□□□□ -2.03
VPS53YJL029C YGL041C-BQ3E750 60 aa2.39□□□□□ -2.03
VPS53YJL029C YLR307C-AQ3E825 87 aa2.39□□□□□ -2.03
VPS53YJL029C YBR209WP38311 105 aa2.38□□□□□ -2.03
VPS53YJL029C MHR1Q06630 226 aa2.38□□□□□ -2.03
VPS53YJL029C RPF1P38805 295 aaKnown RBP2.37□□□□□ -2.03
VPS53YJL029C ARL3Q02804 198 aa2.37□□□□□ -2.03
VPS53YJL029C RPL27BP0C2H7 136 aaKnown RBP2.37□□□□□ -2.03
VPS53YJL029C RPL31AP0C2H8 113 aaKnown RBP2.37□□□□□ -2.03
VPS53YJL029C YAL064WP39711 94 aa2.37□□□□□ -2.03
VPS53YJL029C CYT2Q00873 224 aa2.37□□□□□ -2.03
VPS53YJL029C PPT2Q12036 173 aa2.37□□□□□ -2.03
VPS53YJL029C COA3Q3E7B2 85 aa2.37□□□□□ -2.03
VPS53YJL029C YAL065CO13511 128 aa2.36□□□□□ -2.03
VPS53YJL029C YBR219CP38317 127 aa2.36□□□□□ -2.03
VPS53YJL029C SNA2P56508 79 aa2.36□□□□□ -2.03
VPS53YJL029C ECM12O13529 151 aa2.36□□□□□ -2.03
VPS53YJL029C PRE1P22141 198 aaKnown RBP2.36□□□□□ -2.03
VPS53YJL029C YKL070WP36087 169 aa2.36□□□□□ -2.03
VPS53YJL029C YBL081WP38180 368 aaKnown RBP2.35□□□□□ -2.03
VPS53YJL029C YMR295CQ03559 197 aa2.35□□□□□ -2.03
VPS53YJL029C RUB1Q03919 77 aa2.35□□□□□ -2.03
VPS53YJL029C YPR014CQ6B0W2 109 aa2.35□□□□□ -2.03
VPS53YJL029C GSP1P32835 219 aaKnown RBP2.35□□□□□ -2.03
VPS53YJL029C GSP2P32836 220 aaKnown RBP2.35□□□□□ -2.03
VPS53YJL029C COX14P39103 70 aa2.35□□□□□ -2.03
VPS53YJL029C PEX17P40155 199 aa2.35□□□□□ -2.03
VPS53YJL029C NSE4P43124 402 aa2.35□□□□□ -2.03
VPS53YJL029C YGL088WP53151 121 aa2.35□□□□□ -2.03
VPS53YJL029C HMRA2P0CY13 119 aa2.34□□□□□ -2.03
VPS53YJL029C YER085CP40058 173 aa2.34□□□□□ -2.03
VPS53YJL029C YLR050CQ12155 161 aaKnown RBP2.34□□□□□ -2.03
VPS53YJL029C QCR8P08525 94 aa2.34□□□□□ -2.04
VPS53YJL029C HAP3P13434 144 aa2.34□□□□□ -2.04
VPS53YJL029C POP7P38291 140 aa2.34□□□□□ -2.04
VPS53YJL029C SHU1P38751 150 aa2.34□□□□□ -2.04
VPS53YJL029C AIM19P40502 157 aa2.34□□□□□ -2.04
VPS53YJL029C YFL019CP43576 117 aa2.34□□□□□ -2.04
VPS53YJL029C MBF1O14467 151 aaKnown RBP2.33□□□□□ -2.04
VPS53YJL029C PEX22P39718 180 aa2.33□□□□□ -2.04
VPS53YJL029C YBL112CQ3E7Y4 105 aa2.33□□□□□ -2.04
VPS53YJL029C AQY2P0CD90 149 aa2.33□□□□□ -2.04
VPS53YJL029C RPL18AP0CX49 186 aaKnown RBP2.33□□□□□ -2.04
VPS53YJL029C RPL18BP0CX50 186 aaKnown RBP2.33□□□□□ -2.04
VPS53YJL029C SMP1P38128 452 aa2.33□□□□□ -2.04
VPS53YJL029C MMS2P53152 137 aa2.33□□□□□ -2.04
VPS53YJL029C YBL039W-BP0C268 59 aa2.32□□□□□ -2.04
VPS53YJL029C SCM4P32564 187 aa2.32□□□□□ -2.04
VPS53YJL029C POP3P53833 195 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms