RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	ORM1	P53224	222 aa		0.39	□□□□□ -2.35
URM1	YIL008W	TMA23	Q03525	211 aa		0.39	□□□□□ -2.35
URM1	YIL008W	SPC24	Q04477	213 aa		0.39	□□□□□ -2.35
URM1	YIL008W	YMR253C	Q04835	414 aa		0.39	□□□□□ -2.35
URM1	YIL008W	YLR031W	Q07978	186 aa		0.39	□□□□□ -2.35
URM1	YIL008W	YOL014W	Q08110	124 aa		0.39	□□□□□ -2.35
URM1	YIL008W	SCP1	Q08873	200 aa		0.39	□□□□□ -2.35
URM1	YIL008W	YDR029W	Q12111	104 aa		0.39	□□□□□ -2.35
URM1	YIL008W	YPR145C-A	Q2V2P0	78 aa		0.39	□□□□□ -2.35
URM1	YIL008W	KTI11	Q3E840	82 aa		0.39	□□□□□ -2.35
URM1	YIL008W	QCR2	P07257	368 aa		0.38	□□□□□ -2.35
URM1	YIL008W	SHB17	P36136	271 aa	Known RBP	0.38	□□□□□ -2.35
URM1	YIL008W	LSM2	P38203	95 aa	Known RBP	0.38	□□□□□ -2.35
URM1	YIL008W	HTD2	P38790	280 aa	Known RBP	0.38	□□□□□ -2.35
URM1	YIL008W	EGD2	P38879	174 aa	Known RBP	0.38	□□□□□ -2.35
URM1	YIL008W	GIM3	P53900	129 aa		0.38	□□□□□ -2.35
URM1	YIL008W	SNA2	P56508	79 aa		0.38	□□□□□ -2.35
URM1	YIL008W	ERI1	P62651	68 aa	Known RBP	0.38	□□□□□ -2.35
URM1	YIL008W	YDR366C	P87287	132 aa		0.38	□□□□□ -2.35
URM1	YIL008W	MAK3	Q03503	176 aa		0.38	□□□□□ -2.35
URM1	YIL008W	RAV2	Q03956	351 aa		0.38	□□□□□ -2.35
URM1	YIL008W	YMR320W	Q04897	101 aa		0.38	□□□□□ -2.35
URM1	YIL008W	KEI1	Q06346	221 aa		0.38	□□□□□ -2.35
URM1	YIL008W	FRQ1	Q06389	190 aa		0.38	□□□□□ -2.35
URM1	YIL008W	SYM1	Q06563	197 aa		0.38	□□□□□ -2.35
URM1	YIL008W	RRT7	Q07829	113 aa		0.38	□□□□□ -2.35
URM1	YIL008W	POC4	Q12245	148 aa	Predicted RBP	0.38	□□□□□ -2.35
URM1	YIL008W	PET20	Q99373	253 aa		0.38	□□□□□ -2.35
URM1	YIL008W	HTB2	P02294	131 aa		0.37	□□□□□ -2.35
URM1	YIL008W	RPS25B	P0C0T4	108 aa	Known RBP	0.37	□□□□□ -2.35
URM1	YIL008W	UBC4	P15731	148 aa		0.37	□□□□□ -2.35
URM1	YIL008W	MRP17	P28778	131 aa		0.37	□□□□□ -2.35
URM1	YIL008W	RPL14A	P36105	138 aa	Known RBP	0.37	□□□□□ -2.35
URM1	YIL008W	RPL14B	P38754	138 aa	Known RBP	0.37	□□□□□ -2.35
URM1	YIL008W	SPI1	P40092	148 aa		0.37	□□□□□ -2.35
URM1	YIL008W	SWM2	P40342	146 aa		0.37	□□□□□ -2.35
URM1	YIL008W	YIL102C	P40488	101 aa		0.37	□□□□□ -2.35
URM1	YIL008W	CIN5	P40917	295 aa		0.37	□□□□□ -2.35
URM1	YIL008W	LSM1	P47017	172 aa	Known RBP	0.37	□□□□□ -2.35
URM1	YIL008W	MIC27	P50945	234 aa		0.37	□□□□□ -2.35
URM1	YIL008W	BRP1	P53194	125 aa		0.37	□□□□□ -2.35
URM1	YIL008W	PMP3	P87284	55 aa		0.37	□□□□□ -2.35
URM1	YIL008W	VPS28	Q02767	242 aa		0.37	□□□□□ -2.35
URM1	YIL008W	AIM34	Q03673	198 aa		0.37	□□□□□ -2.35
URM1	YIL008W	YLR194C	Q05777	254 aa		0.37	□□□□□ -2.35
URM1	YIL008W	NAT3	Q06504	195 aa		0.37	□□□□□ -2.35
URM1	YIL008W	ATG41	Q12048	136 aa		0.37	□□□□□ -2.35
URM1	YIL008W	YBR200W-A	Q3E755	54 aa		0.37	□□□□□ -2.35
URM1	YIL008W	RPS25A	Q3E792	108 aa	Predicted RBP	0.37	□□□□□ -2.35
URM1	YIL008W	YMR122W-A	Q3E842	84 aa		0.37	□□□□□ -2.35
URM1	YIL008W	YML100W-A	Q8TGT0	57 aa		0.37	□□□□□ -2.35
URM1	YIL008W	MED11	Q99278	115 aa		0.37	□□□□□ -2.35
URM1	YIL008W	ECM12	O13529	151 aa		0.36	□□□□□ -2.35
URM1	YIL008W	UBC5	P15732	148 aa		0.36	□□□□□ -2.35
URM1	YIL008W	SEC59	P20048	519 aa		0.36	□□□□□ -2.35
URM1	YIL008W	HSP12	P22943	109 aa	Known RBP	0.36	□□□□□ -2.35
URM1	YIL008W	YCR023C	P25351	611 aa		0.36	□□□□□ -2.35
URM1	YIL008W	YAL064W	P39711	94 aa		0.36	□□□□□ -2.35
URM1	YIL008W	YGR269W	P40326	108 aa		0.36	□□□□□ -2.35
URM1	YIL008W	RPC10	P40422	70 aa		0.36	□□□□□ -2.35
URM1	YIL008W	POG1	P40473	351 aa		0.36	□□□□□ -2.35
URM1	YIL008W	YJR111C	P47148	283 aa	Known RBP	0.36	□□□□□ -2.35
URM1	YIL008W	VMA10	P48836	114 aa	Known RBP	0.36	□□□□□ -2.35
URM1	YIL008W	YMR090W	Q04304	227 aa	Known RBP	0.36	□□□□□ -2.35
URM1	YIL008W	FYV12	Q08559	129 aa		0.36	□□□□□ -2.35
URM1	YIL008W	YOR385W	Q08909	290 aa		0.36	□□□□□ -2.35
URM1	YIL008W	RDI1	Q12434	202 aa		0.36	□□□□□ -2.35
URM1	YIL008W	YGL041C-B	Q3E750	60 aa		0.36	□□□□□ -2.35
URM1	YIL008W	COA2	Q3E823	68 aa		0.36	□□□□□ -2.35
URM1	YIL008W	PCC1	Q3E833	88 aa		0.36	□□□□□ -2.35
URM1	YIL008W	KSH1	Q8TGJ3	72 aa		0.36	□□□□□ -2.35
URM1	YIL008W	MRS1	P07266	363 aa		0.35	□□□□□ -2.35
URM1	YIL008W	MRP49	P32388	137 aa		0.35	□□□□□ -2.35
URM1	YIL008W	DER1	P38307	211 aa		0.35	□□□□□ -2.35
URM1	YIL008W	AME1	P38313	324 aa		0.35	□□□□□ -2.35
URM1	YIL008W	SLM6	P38343	150 aa		0.35	□□□□□ -2.35
URM1	YIL008W	YHR173C	P38864	112 aa		0.35	□□□□□ -2.35
URM1	YIL008W	SEC72	P39742	193 aa	Known RBP	0.35	□□□□□ -2.35
URM1	YIL008W	SPC25	P40014	221 aa		0.35	□□□□□ -2.35
URM1	YIL008W	YMR141C	P40211	102 aa		0.35	□□□□□ -2.35
URM1	YIL008W	YIL163C	P40448	117 aa		0.35	□□□□□ -2.35
URM1	YIL008W	RPS29A	P41057	56 aa	Known RBP	0.35	□□□□□ -2.35
URM1	YIL008W	CWP2	P43497	92 aa		0.35	□□□□□ -2.35
URM1	YIL008W	RBL2	P48606	106 aa	Known RBP	0.35	□□□□□ -2.35
URM1	YIL008W	DAD1	Q12248	94 aa		0.35	□□□□□ -2.35
URM1	YIL008W	YLR146W-A	Q2V2P1	62 aa		0.35	□□□□□ -2.35
URM1	YIL008W	YLR342W-A	Q3E810	57 aa		0.35	□□□□□ -2.35
URM1	YIL008W	SUS1	Q6WNK7	96 aa		0.35	□□□□□ -2.35
URM1	YIL008W	YHR213W-A	Q8TGT4	77 aa		0.35	□□□□□ -2.35
URM1	YIL008W	ARG80	P07249	177 aa		0.34	□□□□□ -2.36
URM1	YIL008W	SPS2	P08459	502 aa		0.34	□□□□□ -2.36
URM1	YIL008W	MRPL31	P14063	131 aa	Predicted RBP	0.34	□□□□□ -2.36
URM1	YIL008W	QCR9	P22289	66 aa		0.34	□□□□□ -2.36
URM1	YIL008W	MRPL24	P36525	258 aa	Predicted RBP	0.34	□□□□□ -2.36
URM1	YIL008W	YAR064W	P39563	99 aa		0.34	□□□□□ -2.36
URM1	YIL008W	YEA6	P39953	335 aa		0.34	□□□□□ -2.36
URM1	YIL008W	YFL019C	P43576	117 aa		0.34	□□□□□ -2.36
URM1	YIL008W	DCV1	P43595	202 aa		0.34	□□□□□ -2.36
URM1	YIL008W	MRPS17	Q03246	237 aa	Predicted RBP	0.34	□□□□□ -2.36
URM1	YIL008W	YMR082C	Q04276	118 aa		0.34	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms