RNA–Protein interactions for RNA: YFR052W

RPN12, Transcript of Subunit of the 19S regulatory particle of the 26S proteasome lid, yeastyeast

Gene RPN12, Length 825 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN12YFR052W YDR115WQ04598 105 aa3.48□□□□□ -1.85
RPN12YFR052W ZEO1Q08245 113 aa3.48□□□□□ -1.85
RPN12YFR052W RPS22BQ3E7Y3 130 aaKnown RBP3.48□□□□□ -1.85
RPN12YFR052W RPL16AP26784 199 aaKnown RBP3.47□□□□□ -1.85
RPN12YFR052W AIM29P36154 155 aa3.47□□□□□ -1.85
RPN12YFR052W PFY1P07274 126 aa3.46□□□□□ -1.86
RPN12YFR052W MRP49P32388 137 aa3.46□□□□□ -1.86
RPN12YFR052W YKR070WP36151 352 aaKnown RBP3.46□□□□□ -1.86
RPN12YFR052W GTT1P40582 234 aa3.46□□□□□ -1.86
RPN12YFR052W YJR146WP47174 117 aa3.46□□□□□ -1.86
RPN12YFR052W CYT2Q00873 224 aa3.46□□□□□ -1.86
RPN12YFR052W ADH2P00331 348 aaKnown RBP3.45□□□□□ -1.86
RPN12YFR052W SEC72P39742 193 aaKnown RBP3.45□□□□□ -1.86
RPN12YFR052W MGR2Q02889 113 aa3.45□□□□□ -1.86
RPN12YFR052W YER175W-AQ8TGU4 54 aa3.45□□□□□ -1.86
RPN12YFR052W YAR023CD6VPM8 179 aa3.44□□□□□ -1.86
RPN12YFR052W YAL064WP39711 94 aa3.44□□□□□ -1.86
RPN12YFR052W YEL008WP40001 126 aa3.44□□□□□ -1.86
RPN12YFR052W YER134CP40081 178 aa3.44□□□□□ -1.86
RPN12YFR052W YPR010C-AA5Z2X5 72 aa3.43□□□□□ -1.86
RPN12YFR052W HMRA2P0CY13 119 aa3.43□□□□□ -1.86
RPN12YFR052W GSP1P32835 219 aaKnown RBP3.43□□□□□ -1.86
RPN12YFR052W GSP2P32836 220 aaKnown RBP3.43□□□□□ -1.86
RPN12YFR052W YBL081WP38180 368 aaKnown RBP3.43□□□□□ -1.86
RPN12YFR052W YBR219CP38317 127 aa3.43□□□□□ -1.86
RPN12YFR052W TIM11P81449 96 aaPredicted RBP3.43□□□□□ -1.86
RPN12YFR052W ARL3Q02804 198 aa3.43□□□□□ -1.86
RPN12YFR052W TPT1Q12272 230 aaKnown RBP3.43□□□□□ -1.86
RPN12YFR052W YOR008C-AQ3E7B9 74 aa3.43□□□□□ -1.86
RPN12YFR052W YCL021W-AQ96VH3 125 aa3.43□□□□□ -1.86
RPN12YFR052W TRP1P00912 224 aa3.42□□□□□ -1.86
RPN12YFR052W YDR034C-AP0C289 58 aa3.42□□□□□ -1.86
RPN12YFR052W ERG28P40030 148 aa3.42□□□□□ -1.86
RPN12YFR052W TOS6P48560 102 aa3.42□□□□□ -1.86
RPN12YFR052W ERG27Q12452 347 aaKnown RBP3.42□□□□□ -1.86
RPN12YFR052W YGL118CP53132 145 aa3.41□□□□□ -1.86
RPN12YFR052W PKR1Q03880 122 aaKnown RBP3.41□□□□□ -1.86
RPN12YFR052W YMR295CQ03559 197 aa3.4□□□□□ -1.87
RPN12YFR052W BET5Q03630 159 aa3.4□□□□□ -1.87
RPN12YFR052W YLR112WQ12130 139 aa3.4□□□□□ -1.87
RPN12YFR052W COA3Q3E7B2 85 aa3.4□□□□□ -1.87
RPN12YFR052W YPL229WQ99395 206 aa3.4□□□□□ -1.87
RPN12YFR052W ATP15P21306 62 aa3.39□□□□□ -1.87
RPN12YFR052W RPC10P40422 70 aa3.39□□□□□ -1.87
RPN12YFR052W OST3P48439 350 aa3.39□□□□□ -1.87
RPN12YFR052W ERV14P53173 138 aa3.39□□□□□ -1.87
RPN12YFR052W POP3P53833 195 aaPredicted RBP3.39□□□□□ -1.87
RPN12YFR052W SNA2P56508 79 aa3.39□□□□□ -1.87
RPN12YFR052W YDR042CQ03205 200 aa3.39□□□□□ -1.87
RPN12YFR052W ENV10Q99382 181 aa3.39□□□□□ -1.87
RPN12YFR052W SMP1P38128 452 aa3.38□□□□□ -1.87
RPN12YFR052W FYV4P38783 130 aaPredicted RBP3.38□□□□□ -1.87
RPN12YFR052W CIN5P40917 295 aa3.38□□□□□ -1.87
RPN12YFR052W SEN15Q04675 128 aa3.38□□□□□ -1.87
RPN12YFR052W YLR194CQ05777 254 aa3.38□□□□□ -1.87
RPN12YFR052W YDR029WQ12111 104 aa3.38□□□□□ -1.87
RPN12YFR052W RPL31AP0C2H8 113 aaKnown RBP3.37□□□□□ -1.87
RPN12YFR052W YML108WQ03759 105 aa3.37□□□□□ -1.87
RPN12YFR052W YMR103CQ04436 120 aa3.37□□□□□ -1.87
RPN12YFR052W APS1P35181 156 aa3.36□□□□□ -1.87
RPN12YFR052W RPL27BP0C2H7 136 aaKnown RBP3.35□□□□□ -1.87
RPN12YFR052W SSS1P35179 80 aa3.35□□□□□ -1.87
RPN12YFR052W YKL070WP36087 169 aa3.35□□□□□ -1.87
RPN12YFR052W YMR175W-AQ3E766 64 aa3.35□□□□□ -1.87
RPN12YFR052W CMC2Q3E7A4 109 aa3.35□□□□□ -1.87
RPN12YFR052W YLR307C-AQ3E825 87 aa3.35□□□□□ -1.87
RPN12YFR052W SCS22Q6Q595 175 aa3.35□□□□□ -1.87
RPN12YFR052W HTL1Q9URQ5 78 aa3.35□□□□□ -1.87
RPN12YFR052W YAL065CO13511 128 aa3.34□□□□□ -1.87
RPN12YFR052W YDL022C-AP0C5L6 82 aa3.34□□□□□ -1.87
RPN12YFR052W YAR029WP39549 74 aa3.34□□□□□ -1.87
RPN12YFR052W PEX22P39718 180 aa3.34□□□□□ -1.87
RPN12YFR052W AIM11P87275 137 aa3.34□□□□□ -1.87
RPN12YFR052W CUE4Q04201 117 aaPredicted RBP3.34□□□□□ -1.87
RPN12YFR052W DFM1Q12743 341 aaKnown RBP3.34□□□□□ -1.87
RPN12YFR052W SHU1P38751 150 aa3.33□□□□□ -1.88
RPN12YFR052W VTC1P40046 129 aaRIP-Chip data3.33□□□□□ -1.88not detected
RPN12YFR052W YIL134C-AQ45U18 67 aa3.33□□□□□ -1.88
RPN12YFR052W MRPL11P36521 249 aaPredicted RBP3.32□□□□□ -1.88
RPN12YFR052W YPL261CQ08976 102 aa3.32□□□□□ -1.88
RPN12YFR052W RPL18AP0CX49 186 aaKnown RBP3.31□□□□□ -1.88
RPN12YFR052W RPL18BP0CX50 186 aaKnown RBP3.31□□□□□ -1.88
RPN12YFR052W RPL28P02406 149 aaKnown RBP3.3□□□□□ -1.88
RPN12YFR052W TOA2P32774 122 aa3.3□□□□□ -1.88
RPN12YFR052W PAU16P35994 123 aa3.3□□□□□ -1.88
RPN12YFR052W RPL32P38061 130 aaKnown RBP3.3□□□□□ -1.88
RPN12YFR052W COX14P39103 70 aa3.3□□□□□ -1.88
RPN12YFR052W YEL067CP39978 195 aa3.3□□□□□ -1.88
RPN12YFR052W CWP2P43497 92 aa3.3□□□□□ -1.88
RPN12YFR052W YFL067WP43537 175 aa3.3□□□□□ -1.88
RPN12YFR052W MMS2P53152 137 aa3.3□□□□□ -1.88
RPN12YFR052W SMD1Q02260 146 aaPredicted RBP3.3□□□□□ -1.88
RPN12YFR052W LCL1Q02786 101 aa3.3□□□□□ -1.88
RPN12YFR052W AQY2P0CD90 149 aa3.29□□□□□ -1.88
RPN12YFR052W YKR041WP36134 250 aa3.29□□□□□ -1.88
RPN12YFR052W PEX17P40155 199 aa3.29□□□□□ -1.88
RPN12YFR052W MRPS12P53732 153 aa3.29□□□□□ -1.88
RPN12YFR052W ECM12O13529 151 aa3.28□□□□□ -1.88
RPN12YFR052W ADH1P00330 348 aaKnown RBP3.28□□□□□ -1.88
RPN12YFR052W SEC11P15367 167 aa3.28□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms