RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeastyeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB3YFR024C-A TRP1P00912 224 aa6.42□□□□□ -1.38
LSB3YFR024C-A AIM29P36154 155 aa6.42□□□□□ -1.38
LSB3YFR024C-A YOR008C-AQ3E7B9 74 aa6.42□□□□□ -1.38
LSB3YFR024C-A PRE1P22141 198 aaKnown RBP6.41□□□□□ -1.38
LSB3YFR024C-A PCL2P25693 308 aa6.41□□□□□ -1.38
LSB3YFR024C-A URM1P40554 99 aaPredicted RBP6.41□□□□□ -1.38
LSB3YFR024C-A GIS2P53849 153 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38 RIP-Chip
LSB3YFR024C-A RRT15Q3E811 62 aa6.41□□□□□ -1.38
LSB3YFR024C-A YPL229WQ99395 206 aa6.41□□□□□ -1.38
LSB3YFR024C-A ERV14P53173 138 aa6.4□□□□□ -1.39
LSB3YFR024C-A MED7Q08278 222 aa6.4□□□□□ -1.39
LSB3YFR024C-A PKR1Q03880 122 aaKnown RBP6.39□□□□□ -1.39
LSB3YFR024C-A GSP1P32835 219 aaKnown RBP6.38□□□□□ -1.39
LSB3YFR024C-A GSP2P32836 220 aaKnown RBP6.38□□□□□ -1.39
LSB3YFR024C-A YAR029WP39549 74 aa6.38□□□□□ -1.39
LSB3YFR024C-A BET5Q03630 159 aa6.38□□□□□ -1.39
LSB3YFR024C-A YML108WQ03759 105 aa6.38□□□□□ -1.39
LSB3YFR024C-A YCL021W-AQ96VH3 125 aa6.38□□□□□ -1.39
LSB3YFR024C-A YAR023CD6VPM8 179 aa6.37□□□□□ -1.39
LSB3YFR024C-A YEL008WP40001 126 aa6.37□□□□□ -1.39
LSB3YFR024C-A YER085CP40058 173 aa6.37□□□□□ -1.39
LSB3YFR024C-A OST3P48439 350 aa6.37□□□□□ -1.39
LSB3YFR024C-A ENV10Q99382 181 aa6.37□□□□□ -1.39
LSB3YFR024C-A HTL1Q9URQ5 78 aa6.37□□□□□ -1.39
LSB3YFR024C-A HMRA2P0CY13 119 aa6.36□□□□□ -1.39
LSB3YFR024C-A LCL2Q08045 131 aa6.36□□□□□ -1.39
LSB3YFR024C-A ARL3Q02804 198 aa6.35□□□□□ -1.39
LSB3YFR024C-A YDR042CQ03205 200 aa6.35□□□□□ -1.39
LSB3YFR024C-A YER134CP40081 178 aa6.34□□□□□ -1.39
LSB3YFR024C-A RPC10P40422 70 aa6.33□□□□□ -1.4
LSB3YFR024C-A COA3Q3E7B2 85 aa6.33□□□□□ -1.4
LSB3YFR024C-A YDR034C-AP0C289 58 aa6.32□□□□□ -1.4
LSB3YFR024C-A RPL27BP0C2H7 136 aaKnown RBP6.31□□□□□ -1.4
LSB3YFR024C-A RPL31AP0C2H8 113 aaKnown RBP6.31□□□□□ -1.4
LSB3YFR024C-A YBR219CP38317 127 aa6.31□□□□□ -1.4
LSB3YFR024C-A YAL064WP39711 94 aa6.31□□□□□ -1.4
LSB3YFR024C-A YLR112WQ12130 139 aa6.31□□□□□ -1.4
LSB3YFR024C-A YMR175W-AQ3E766 64 aa6.31□□□□□ -1.4
LSB3YFR024C-A APS1P35181 156 aa6.31□□□□□ -1.4
LSB3YFR024C-A POP3P53833 195 aaPredicted RBP6.31□□□□□ -1.4
LSB3YFR024C-A TIM11P81449 96 aaPredicted RBP6.31□□□□□ -1.4
LSB3YFR024C-A TPT1Q12272 230 aaKnown RBP6.31□□□□□ -1.4
LSB3YFR024C-A CIN5P40917 295 aa6.3□□□□□ -1.4
LSB3YFR024C-A YBL081WP38180 368 aaKnown RBP6.29□□□□□ -1.4
LSB3YFR024C-A YMR295CQ03559 197 aa6.29□□□□□ -1.4
LSB3YFR024C-A YDR029WQ12111 104 aa6.28□□□□□ -1.4
LSB3YFR024C-A SNA2P56508 79 aa6.27□□□□□ -1.41
LSB3YFR024C-A CUE4Q04201 117 aaPredicted RBP6.27□□□□□ -1.41
LSB3YFR024C-A YMR103CQ04436 120 aa6.27□□□□□ -1.41
LSB3YFR024C-A YLR194CQ05777 254 aa6.27□□□□□ -1.41
LSB3YFR024C-A DFM1Q12743 341 aaKnown RBP6.27□□□□□ -1.41
LSB3YFR024C-A CMC2Q3E7A4 109 aa6.27□□□□□ -1.41
LSB3YFR024C-A ATP15P21306 62 aa6.26□□□□□ -1.41
LSB3YFR024C-A YKL070WP36087 169 aa6.26□□□□□ -1.41
LSB3YFR024C-A FYV4P38783 130 aaPredicted RBP6.26□□□□□ -1.41
LSB3YFR024C-A SSS1P35179 80 aa6.25□□□□□ -1.41
LSB3YFR024C-A VTC1P40046 129 aaRIP-Chip data6.24□□□□□ -1.41not detected
LSB3YFR024C-A YDL241WQ07738 123 aa6.23□□□□□ -1.41
LSB3YFR024C-A YAL065CO13511 128 aa6.22□□□□□ -1.41
LSB3YFR024C-A PAU16P35994 123 aa6.22□□□□□ -1.41
LSB3YFR024C-A CNL1Q06333 122 aa6.22□□□□□ -1.41
LSB3YFR024C-A YLR050CQ12155 161 aaKnown RBP6.22□□□□□ -1.41
LSB3YFR024C-A MRPL11P36521 249 aaPredicted RBP6.21□□□□□ -1.41
LSB3YFR024C-A SHU1P38751 150 aa6.21□□□□□ -1.41
LSB3YFR024C-A AIM11P87275 137 aa6.21□□□□□ -1.41
LSB3YFR024C-A PPT2Q12036 173 aa6.21□□□□□ -1.41
LSB3YFR024C-A ATP16Q12165 160 aa6.21□□□□□ -1.41
LSB3YFR024C-A COX14P39103 70 aa6.19□□□□□ -1.42
LSB3YFR024C-A COA6Q3E846 104 aa6.19□□□□□ -1.42
LSB3YFR024C-A PEX17P40155 199 aa6.18□□□□□ -1.42
LSB3YFR024C-A YIL134C-AQ45U18 67 aa6.18□□□□□ -1.42
LSB3YFR024C-A TOA2P32774 122 aa6.18□□□□□ -1.42
LSB3YFR024C-A SEN15Q04675 128 aa6.18□□□□□ -1.42
LSB3YFR024C-A YLR307C-AQ3E825 87 aa6.18□□□□□ -1.42
LSB3YFR024C-A RPL32P38061 130 aaKnown RBP6.17□□□□□ -1.42
LSB3YFR024C-A SMP1P38128 452 aa6.17□□□□□ -1.42
LSB3YFR024C-A LCL1Q02786 101 aa6.17□□□□□ -1.42
LSB3YFR024C-A YPL261CQ08976 102 aa6.17□□□□□ -1.42
LSB3YFR024C-A AQY2P0CD90 149 aa6.16□□□□□ -1.42
LSB3YFR024C-A RPL18AP0CX49 186 aaKnown RBP6.16□□□□□ -1.42
LSB3YFR024C-A RPL18BP0CX50 186 aaKnown RBP6.16□□□□□ -1.42
LSB3YFR024C-A YGL041C-BQ3E750 60 aa6.16□□□□□ -1.42
LSB3YFR024C-A PEX22P39718 180 aa6.15□□□□□ -1.43
LSB3YFR024C-A ECM12O13529 151 aa6.14□□□□□ -1.43
LSB3YFR024C-A ADH1P00330 348 aaKnown RBP6.14□□□□□ -1.43
LSB3YFR024C-A QCR8P08525 94 aa6.14□□□□□ -1.43
LSB3YFR024C-A YKR041WP36134 250 aa6.14□□□□□ -1.43
LSB3YFR024C-A RPF1P38805 295 aaKnown RBP6.14□□□□□ -1.43
LSB3YFR024C-A OXA1P39952 402 aa6.14□□□□□ -1.43
LSB3YFR024C-A YDL022C-AP0C5L6 82 aa6.13□□□□□ -1.43
LSB3YFR024C-A YKL044WP36092 106 aa6.13□□□□□ -1.43
LSB3YFR024C-A HAC1P41546 238 aa6.13□□□□□ -1.43
LSB3YFR024C-A SEC11P15367 167 aa6.12□□□□□ -1.43
LSB3YFR024C-A CWP2P43497 92 aa6.12□□□□□ -1.43
LSB3YFR024C-A ABF2Q02486 183 aa6.12□□□□□ -1.43
LSB3YFR024C-A SCS22Q6Q595 175 aa6.12□□□□□ -1.43
LSB3YFR024C-A HAP3P13434 144 aa6.11□□□□□ -1.43
LSB3YFR024C-A SMD1Q02260 146 aaPredicted RBP6.11□□□□□ -1.43
LSB3YFR024C-A MRPL44P19956 98 aa6.09□□□□□ -1.43
LSB3YFR024C-A MVB12P42939 101 aa6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms