RNA–Protein interactions for RNA: YFL003C

MSH4, Transcript of Protein involved in meiotic recombination, yeastyeast

Gene MSH4, Length 2,637 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH4YFL003C YPL225WQ08971 146 aaKnown RBP1.75□□□□□ -2.13
MSH4YFL003C HSP150P32478 413 aa1.75□□□□□ -2.13
MSH4YFL003C IPT1P38954 527 aa1.75□□□□□ -2.13
MSH4YFL003C YGL149WP53116 101 aa1.75□□□□□ -2.13
MSH4YFL003C ERV14P53173 138 aa1.75□□□□□ -2.13
MSH4YFL003C GPI11Q06636 219 aa1.75□□□□□ -2.13
MSH4YFL003C RTR2Q12378 196 aa1.75□□□□□ -2.13
MSH4YFL003C YBR056W-AI2HB52 66 aa1.74□□□□□ -2.13
MSH4YFL003C SEC59P20048 519 aa1.74□□□□□ -2.13
MSH4YFL003C YCR101CP25607 182 aa1.74□□□□□ -2.13
MSH4YFL003C UTP11P34247 250 aaPredicted RBP1.74□□□□□ -2.13
MSH4YFL003C YKL044WP36092 106 aa1.74□□□□□ -2.13
MSH4YFL003C YGL230CP53074 147 aa1.74□□□□□ -2.13
MSH4YFL003C CWC27Q02770 301 aa1.74□□□□□ -2.13
MSH4YFL003C TAR1Q8TGM6 124 aa1.74□□□□□ -2.13
MSH4YFL003C HSP10P38910 106 aa1.74□□□□□ -2.13
MSH4YFL003C SNF11P38956 169 aa1.74□□□□□ -2.13
MSH4YFL003C RCE1Q03530 315 aa1.74□□□□□ -2.13
MSH4YFL003C GTT2Q12390 233 aa1.74□□□□□ -2.13
MSH4YFL003C FUN14P18411 198 aa1.73□□□□□ -2.13
MSH4YFL003C YEL008WP40001 126 aa1.73□□□□□ -2.13
MSH4YFL003C DCV1P43595 202 aa1.73□□□□□ -2.13
MSH4YFL003C VAR1P02381 398 aa1.73□□□□□ -2.13
MSH4YFL003C TRA1P38811 3744 aa1.73□□□□□ -2.13
MSH4YFL003C YCR099CP25657 155 aa1.72□□□□□ -2.13
MSH4YFL003C YPL067CQ02754 198 aa1.72□□□□□ -2.13
MSH4YFL003C PAU21P0CE86 164 aa1.72□□□□□ -2.13
MSH4YFL003C PAU22P0CE87 164 aa1.72□□□□□ -2.13
MSH4YFL003C ECM31P38122 312 aa1.72□□□□□ -2.13
MSH4YFL003C TDA2P40045 126 aa1.72□□□□□ -2.13
MSH4YFL003C YFR035CP43608 114 aa1.72□□□□□ -2.13
MSH4YFL003C BRP1P53194 125 aa1.72□□□□□ -2.13
MSH4YFL003C GPI19Q04082 140 aa1.72□□□□□ -2.13
MSH4YFL003C OCA6Q12454 224 aa1.72□□□□□ -2.13
MSH4YFL003C DYN1P36022 4092 aa1.72□□□□□ -2.13
MSH4YFL003C CSF1Q12150 2958 aa1.72□□□□□ -2.13
MSH4YFL003C RPL13BP40212 199 aaKnown RBP1.71□□□□□ -2.13
MSH4YFL003C YFL051CP43552 160 aa1.71□□□□□ -2.13
MSH4YFL003C RPL13AQ12690 199 aaPredicted RBP1.71□□□□□ -2.13
MSH4YFL003C MHF1Q3E835 90 aa1.71□□□□□ -2.13
MSH4YFL003C CYR1P08678 2026 aaKnown RBP1.71□□□□□ -2.14
MSH4YFL003C QCR8P08525 94 aa1.71□□□□□ -2.14
MSH4YFL003C YNL146C-AQ3E7Z1 64 aa1.71□□□□□ -2.14
MSH4YFL003C ZEO1Q08245 113 aa1.7□□□□□ -2.14
MSH4YFL003C MDN1Q12019 4910 aaKnown RBP1.7□□□□□ -2.14
MSH4YFL003C CDC39P25655 2108 aaKnown RBP1.7□□□□□ -2.14
MSH4YFL003C YBR242WP38331 238 aa1.7□□□□□ -2.14
MSH4YFL003C COA3Q3E7B2 85 aa1.7□□□□□ -2.14
MSH4YFL003C HAP3P13434 144 aa1.69□□□□□ -2.14
MSH4YFL003C YGL010WP25338 174 aa1.69□□□□□ -2.14
MSH4YFL003C GNA1P43577 159 aaPredicted RBP1.69□□□□□ -2.14
MSH4YFL003C YOR289WQ12012 251 aaPredicted RBP1.69□□□□□ -2.14
MSH4YFL003C MED11Q99278 115 aa1.69□□□□□ -2.14
MSH4YFL003C YFL065CP43539 102 aa1.69□□□□□ -2.14
MSH4YFL003C ATG8P38182 117 aaRIP-Chip data1.68□□□□□ -2.14not detected
MSH4YFL003C YHR130CP38834 111 aa1.68□□□□□ -2.14
MSH4YFL003C MEC1P38111 2368 aa1.68□□□□□ -2.14
MSH4YFL003C RTC6O14464 93 aa1.68□□□□□ -2.14
MSH4YFL003C PRE1P22141 198 aaKnown RBP1.68□□□□□ -2.14
MSH4YFL003C BUD23P25627 275 aaPredicted RBP1.68□□□□□ -2.14
MSH4YFL003C EMP24P32803 203 aaKnown RBP1.68□□□□□ -2.14
MSH4YFL003C MRPL11P36521 249 aaPredicted RBP1.68□□□□□ -2.14
MSH4YFL003C HYP2P23301 157 aaKnown RBP1.67□□□□□ -2.14
MSH4YFL003C YBR027CP38220 110 aa1.67□□□□□ -2.14
MSH4YFL003C YBR090CP38253 122 aa1.67□□□□□ -2.14
MSH4YFL003C YMR103CQ04436 120 aa1.67□□□□□ -2.14
MSH4YFL003C YEA6P39953 335 aa1.67□□□□□ -2.14
MSH4YFL003C YGR164WP53291 111 aa1.67□□□□□ -2.14
MSH4YFL003C PAU12P53343 120 aa1.67□□□□□ -2.14
MSH4YFL003C YLR365WQ7LIF2 110 aa1.67□□□□□ -2.14
MSH4YFL003C STT4P37297 1900 aa1.66□□□□□ -2.14
MSH4YFL003C AIM18P38884 321 aa1.66□□□□□ -2.14
MSH4YFL003C RPL36BO14455 100 aaKnown RBP1.66□□□□□ -2.14
MSH4YFL003C RPL36AP05745 100 aaPredicted RBP1.66□□□□□ -2.14
MSH4YFL003C YGL014C-AP0C5N1 53 aa1.66□□□□□ -2.14
MSH4YFL003C YIL014C-AQ02598 104 aa1.65□□□□□ -2.15
MSH4YFL003C YLR296WQ05898 108 aa1.65□□□□□ -2.15
MSH4YFL003C YPL261CQ08976 102 aa1.65□□□□□ -2.15
MSH4YFL003C YHR213WP0CI67 198 aa1.65□□□□□ -2.15
MSH4YFL003C UBC5P15732 148 aa1.65□□□□□ -2.15
MSH4YFL003C SEN15Q04675 128 aa1.65□□□□□ -2.15
MSH4YFL003C MRPL15P36523 253 aa1.64□□□□□ -2.15
MSH4YFL003C YER187WP40102 141 aa1.64□□□□□ -2.15
MSH4YFL003C SED1Q01589 338 aa1.64□□□□□ -2.15
MSH4YFL003C YPR203WQ08994 102 aa1.64□□□□□ -2.15
MSH4YFL003C RPL33AP05744 107 aaKnown RBP1.64□□□□□ -2.15
MSH4YFL003C FIT1Q04433 528 aa1.64□□□□□ -2.15
MSH4YFL003C YLR194CQ05777 254 aa1.64□□□□□ -2.15
MSH4YFL003C HPA2Q06592 156 aa1.64□□□□□ -2.15
MSH4YFL003C VAM10Q08474 114 aa1.64□□□□□ -2.15
MSH4YFL003C DAD1Q12248 94 aa1.64□□□□□ -2.15
MSH4YFL003C HFA1P32874 2273 aa1.63□□□□□ -2.15
MSH4YFL003C OST5Q92316 86 aa1.63□□□□□ -2.15
MSH4YFL003C YCL001W-BQ96VH2 84 aa1.63□□□□□ -2.15
MSH4YFL003C PAU2P32612 120 aa1.63□□□□□ -2.15
MSH4YFL003C LST8P41318 303 aa1.63□□□□□ -2.15
MSH4YFL003C POL2P21951 2222 aaKnown RBP1.63□□□□□ -2.15
MSH4YFL003C YMR122CQ03879 124 aa1.62□□□□□ -2.15
MSH4YFL003C PCC1Q3E833 88 aa1.62□□□□□ -2.15
MSH4YFL003C PAU24P38155 120 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 43.5 ms