RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C YPR203WQ08994 102 aa0.58□□□□□ -2.32
SWI4YER111C RPL33AP05744 107 aaKnown RBP0.58□□□□□ -2.32
SWI4YER111C YHR213WP0CI67 198 aa0.58□□□□□ -2.32
SWI4YER111C FUN14P18411 198 aa0.58□□□□□ -2.32
SWI4YER111C HYM1P32464 399 aa0.58□□□□□ -2.32
SWI4YER111C YFR035CP43608 114 aa0.58□□□□□ -2.32
SWI4YER111C YMR122CQ03879 124 aa0.58□□□□□ -2.32
SWI4YER111C SPC24Q04477 213 aa0.58□□□□□ -2.32
SWI4YER111C YLR099W-AQ3E798 87 aa0.58□□□□□ -2.32
SWI4YER111C VAR1P02381 398 aa0.58□□□□□ -2.32
SWI4YER111C YCR099CP25657 155 aa0.58□□□□□ -2.32
SWI4YER111C AIM18P38884 321 aa0.58□□□□□ -2.32
SWI4YER111C YIL102CP40488 101 aa0.58□□□□□ -2.32
SWI4YER111C YJL009WP47078 108 aa0.58□□□□□ -2.32
SWI4YER111C YPL067CQ02754 198 aa0.58□□□□□ -2.32
SWI4YER111C IRC21Q04772 201 aa0.58□□□□□ -2.32
SWI4YER111C GTT2Q12390 233 aa0.58□□□□□ -2.32
SWI4YER111C MRPL11P36521 249 aaPredicted RBP0.57□□□□□ -2.32
SWI4YER111C YOR072WQ08486 104 aa0.57□□□□□ -2.32
SWI4YER111C TEL1P38110 2787 aa0.57□□□□□ -2.32
SWI4YER111C YGL014C-AP0C5N1 53 aa0.57□□□□□ -2.32
SWI4YER111C YGR164WP53291 111 aa0.57□□□□□ -2.32
SWI4YER111C SAE3P89114 91 aa0.57□□□□□ -2.32
SWI4YER111C HAP2P06774 265 aa0.56□□□□□ -2.32
SWI4YER111C HAP3P13434 144 aa0.56□□□□□ -2.32
SWI4YER111C YCR001WP25347 104 aa0.56□□□□□ -2.32
SWI4YER111C HSP10P38910 106 aa0.56□□□□□ -2.32
SWI4YER111C LDB18Q07887 179 aa0.56□□□□□ -2.32
SWI4YER111C WIP1Q2V2P8 89 aa0.56□□□□□ -2.32
SWI4YER111C MHF1Q3E835 90 aa0.56□□□□□ -2.32
SWI4YER111C SEC59P20048 519 aa0.56□□□□□ -2.32
SWI4YER111C GSP1P32835 219 aaKnown RBP0.56□□□□□ -2.32
SWI4YER111C RPL37AP49166 88 aaKnown RBP0.56□□□□□ -2.32
SWI4YER111C UGX2P32772 223 aa0.56□□□□□ -2.32
SWI4YER111C ERV14P53173 138 aa0.56□□□□□ -2.32
SWI4YER111C ARL3Q02804 198 aa0.56□□□□□ -2.32
SWI4YER111C RPB11P38902 120 aa0.55□□□□□ -2.32
SWI4YER111C COA4Q05809 96 aa0.55□□□□□ -2.32
SWI4YER111C YIL014C-AQ02598 104 aa0.55□□□□□ -2.32
SWI4YER111C MGR2Q02889 113 aa0.55□□□□□ -2.32
SWI4YER111C RPL36BO14455 100 aaKnown RBP0.55□□□□□ -2.32
SWI4YER111C RPL36AP05745 100 aaPredicted RBP0.55□□□□□ -2.32
SWI4YER111C GPI19Q04082 140 aa0.55□□□□□ -2.32
SWI4YER111C PRM3Q08931 133 aa0.55□□□□□ -2.32
SWI4YER111C YOR304C-AO14468 76 aa0.54□□□□□ -2.32
SWI4YER111C YER039C-AP0CD97 72 aa0.54□□□□□ -2.32
SWI4YER111C EMP24P32803 203 aaKnown RBP0.54□□□□□ -2.32
SWI4YER111C YKL044WP36092 106 aa0.54□□□□□ -2.32
SWI4YER111C YGL149WP53116 101 aa0.54□□□□□ -2.32
SWI4YER111C CCW12Q12127 133 aa0.54□□□□□ -2.32
SWI4YER111C YOR376W-AQ3E805 51 aa0.54□□□□□ -2.32
SWI4YER111C OST5Q92316 86 aa0.54□□□□□ -2.32
SWI4YER111C RPS22AP0C0W1 130 aaKnown RBP0.53□□□□□ -2.32
SWI4YER111C YER187WP40102 141 aa0.53□□□□□ -2.32
SWI4YER111C ICS3P47034 131 aa0.53□□□□□ -2.32
SWI4YER111C SEN15Q04675 128 aa0.53□□□□□ -2.32
SWI4YER111C RPS22BQ3E7Y3 130 aaKnown RBP0.53□□□□□ -2.32
SWI4YER111C ATG8P38182 117 aaRIP-Chip data0.53□□□□□ -2.32not detected
SWI4YER111C POR2P40478 281 aa0.53□□□□□ -2.32
SWI4YER111C YIR020CP40575 100 aa0.53□□□□□ -2.32
SWI4YER111C PAM16P42949 149 aa0.53□□□□□ -2.32
SWI4YER111C RPL37BP51402 88 aaKnown RBP0.53□□□□□ -2.33
SWI4YER111C YLR042CQ07990 161 aa0.53□□□□□ -2.33
SWI4YER111C COA6Q3E846 104 aa0.53□□□□□ -2.33
SWI4YER111C SLH1P53327 1967 aaKnown RBP0.52□□□□□ -2.33
SWI4YER111C YSF3P0C074 85 aaPredicted RBP0.52□□□□□ -2.33
SWI4YER111C AIM4P38305 123 aaPredicted RBP0.52□□□□□ -2.33
SWI4YER111C SWC7Q06707 132 aa0.52□□□□□ -2.33
SWI4YER111C FIT3Q08907 204 aa0.52□□□□□ -2.33
SWI4YER111C TOR1P35169 2470 aa0.52□□□□□ -2.33
SWI4YER111C SNF11P38956 169 aa0.52□□□□□ -2.33
SWI4YER111C GTT1P40582 234 aa0.52□□□□□ -2.33
SWI4YER111C YPL261CQ08976 102 aa0.52□□□□□ -2.33
SWI4YER111C FCF2Q12035 217 aaPredicted RBP0.52□□□□□ -2.33
SWI4YER111C YOL013W-AP0C272 63 aaPredicted RBP0.51□□□□□ -2.33
SWI4YER111C UTP11P34247 250 aaPredicted RBP0.51□□□□□ -2.33
SWI4YER111C YAR029WP39549 74 aa0.51□□□□□ -2.33
SWI4YER111C RPL22BP56628 122 aaKnown RBP0.51□□□□□ -2.33
SWI4YER111C YIL163CP40448 117 aa0.51□□□□□ -2.33
SWI4YER111C GNA1P43577 159 aaPredicted RBP0.51□□□□□ -2.33
SWI4YER111C HUR1P45820 110 aa0.51□□□□□ -2.33
SWI4YER111C RTR2Q12378 196 aa0.51□□□□□ -2.33
SWI4YER111C OCA6Q12454 224 aa0.51□□□□□ -2.33
SWI4YER111C YLR365WQ7LIF2 110 aa0.51□□□□□ -2.33
SWI4YER111C YBR090CP38253 122 aa0.51□□□□□ -2.33
SWI4YER111C RGI1P40043 161 aaPredicted RBP0.51□□□□□ -2.33
SWI4YER111C YLR194CQ05777 254 aa0.51□□□□□ -2.33
SWI4YER111C UBC5P15732 148 aa0.5□□□□□ -2.33
SWI4YER111C HPA2Q06592 156 aa0.5□□□□□ -2.33
SWI4YER111C RPL22AP05749 121 aaKnown RBP0.5□□□□□ -2.33
SWI4YER111C TDA2P40045 126 aa0.5□□□□□ -2.33
SWI4YER111C RPS12P48589 143 aaKnown RBP0.5□□□□□ -2.33
SWI4YER111C PAU12P53343 120 aa0.5□□□□□ -2.33
SWI4YER111C RUB1Q03919 77 aa0.5□□□□□ -2.33
SWI4YER111C ACC1Q00955 2233 aaKnown RBP0.5□□□□□ -2.33
SWI4YER111C SRX1P36077 127 aa0.49□□□□□ -2.33
SWI4YER111C YBR013CP38215 129 aa0.49□□□□□ -2.33
SWI4YER111C YEA6P39953 335 aa0.49□□□□□ -2.33
SWI4YER111C YOS1Q3E834 85 aa0.49□□□□□ -2.33
SWI4YER111C YHR213W-BQ8TGK1 99 aa0.49□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms