RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W TY4B-JP47024 1803 aa2.33□□□□□ -2.04
UBC6YER100W MSL1P40567 111 aaPredicted RBP2.32□□□□□ -2.04
UBC6YER100W YPK9Q12697 1472 aa2.32□□□□□ -2.04
UBC6YER100W YMR141CP40211 102 aa2.31□□□□□ -2.04
UBC6YER100W PAU5P43575 122 aa2.31□□□□□ -2.04
UBC6YER100W MRPS12P53732 153 aa2.31□□□□□ -2.04
UBC6YER100W YCR095W-AQ3E787 52 aa2.31□□□□□ -2.04
UBC6YER100W HMRA1P0CY11 126 aa2.3□□□□□ -2.04
UBC6YER100W SLH1P53327 1967 aaKnown RBP2.29□□□□□ -2.04
UBC6YER100W RSF2P46974 1380 aa2.29□□□□□ -2.04
UBC6YER100W IMP2P46972 177 aa2.29□□□□□ -2.04
UBC6YER100W RPL37AP49166 88 aaKnown RBP2.29□□□□□ -2.04
UBC6YER100W LCL1Q02786 101 aa2.29□□□□□ -2.04
UBC6YER100W SNA2P56508 79 aa2.28□□□□□ -2.04
UBC6YER100W YDR029WQ12111 104 aa2.28□□□□□ -2.04
UBC6YER100W SSN2P38931 1420 aa2.27□□□□□ -2.05
UBC6YER100W YCR075W-AQ3E830 75 aa2.27□□□□□ -2.05
UBC6YER100W HFA1P32874 2273 aa2.27□□□□□ -2.05
UBC6YER100W YJR128WP47162 119 aa2.26□□□□□ -2.05
UBC6YER100W YPL038W-AQ3E7B4 63 aa2.26□□□□□ -2.05
UBC6YER100W ROX3P25046 220 aa2.25□□□□□ -2.05
UBC6YER100W YHL005CP38752 130 aa2.25□□□□□ -2.05
UBC6YER100W GCV3P39726 170 aaPredicted RBP2.25□□□□□ -2.05
UBC6YER100W SUS1Q6WNK7 96 aa2.25□□□□□ -2.05
UBC6YER100W CCW14O13547 238 aa2.24□□□□□ -2.05
UBC6YER100W RRT15Q3E811 62 aa2.24□□□□□ -2.05
UBC6YER100W YRF1-3P0CX14 1859 aa2.23□□□□□ -2.05
UBC6YER100W YRF1-7P0CX15 1859 aa2.23□□□□□ -2.05
UBC6YER100W TCB3Q03640 1545 aaKnown RBP2.22□□□□□ -2.05
UBC6YER100W PAU6P0CE90 120 aa2.2□□□□□ -2.06
UBC6YER100W PAU18P0CE91 120 aa2.2□□□□□ -2.06
UBC6YER100W COX12Q01519 83 aa2.2□□□□□ -2.06
UBC6YER100W YOR034C-AQ3E735 80 aa2.18□□□□□ -2.06
UBC6YER100W YBL071CP38185 102 aa2.17□□□□□ -2.06
UBC6YER100W RSM18P40033 138 aa2.17□□□□□ -2.06
UBC6YER100W YGL194C-AQ2V2P6 80 aa2.17□□□□□ -2.06
UBC6YER100W SRB8P25648 1427 aa2.17□□□□□ -2.06
UBC6YER100W MRP17P28778 131 aa2.16□□□□□ -2.06
UBC6YER100W SNU13P39990 126 aaKnown RBP2.16□□□□□ -2.06
UBC6YER100W SPC1P46965 94 aa2.16□□□□□ -2.06
UBC6YER100W NHP10Q03435 203 aa2.16□□□□□ -2.06
UBC6YER100W YDR210WQ03482 75 aa2.16□□□□□ -2.06
UBC6YER100W YRF1-6P53819 1859 aa2.16□□□□□ -2.06
UBC6YER100W ECM12O13529 151 aa2.15□□□□□ -2.07
UBC6YER100W YLR255CO13574 117 aa2.15□□□□□ -2.07
UBC6YER100W RPL43AP0CX25 92 aaKnown RBP2.15□□□□□ -2.07
UBC6YER100W RPL43BP0CX26 92 aa2.15□□□□□ -2.07
UBC6YER100W YIL086CP40503 102 aa2.15□□□□□ -2.07
UBC6YER100W MRX7P53869 86 aa2.15□□□□□ -2.07
UBC6YER100W SPT6P23615 1451 aaKnown RBP2.14□□□□□ -2.07
UBC6YER100W SHU1P38751 150 aa2.14□□□□□ -2.07
UBC6YER100W YDR042CQ03205 200 aa2.14□□□□□ -2.07
UBC6YER100W MHF2Q3E829 80 aa2.14□□□□□ -2.07
UBC6YER100W PAU20Q08322 120 aa2.13□□□□□ -2.07
UBC6YER100W SCP1Q08873 200 aa2.13□□□□□ -2.07
UBC6YER100W TY1B-DR4Q07793 1604 aa2.13□□□□□ -2.07
UBC6YER100W PAU1P0CE88 120 aa2.12□□□□□ -2.07
UBC6YER100W PAU14P0CE89 120 aa2.12□□□□□ -2.07
UBC6YER100W PAU8P0CE92 120 aa2.12□□□□□ -2.07
UBC6YER100W PAU11P0CE93 120 aa2.12□□□□□ -2.07
UBC6YER100W PAU13P38725 120 aa2.12□□□□□ -2.07
UBC6YER100W RPL37BP51402 88 aaKnown RBP2.12□□□□□ -2.07
UBC6YER100W PAU10Q03050 120 aa2.12□□□□□ -2.07
UBC6YER100W PAU9Q3E770 120 aa2.12□□□□□ -2.07
UBC6YER100W YNR034W-AQ3E841 98 aa2.12□□□□□ -2.07
UBC6YER100W XRN1P22147 1528 aaKnown RBP2.12□□□□□ -2.07
UBC6YER100W MMS22Q06164 1454 aa2.1□□□□□ -2.07
UBC6YER100W MPC2P38857 129 aa2.1□□□□□ -2.07
UBC6YER100W PAU4P53427 120 aa2.1□□□□□ -2.07
UBC6YER100W ICY1Q04329 127 aa2.1□□□□□ -2.07
UBC6YER100W THO2P53552 1597 aaKnown RBP2.1□□□□□ -2.07
UBC6YER100W HIR3P47171 1648 aa2.09□□□□□ -2.07
UBC6YER100W YER188C-AP0C0V2 99 aa2.09□□□□□ -2.07
UBC6YER100W MRPL38P35996 138 aaPredicted RBP2.09□□□□□ -2.07
UBC6YER100W AIM19P40502 157 aa2.09□□□□□ -2.07
UBC6YER100W YMR082CQ04276 118 aa2.09□□□□□ -2.07
UBC6YER100W PDR10P51533 1564 aa2.08□□□□□ -2.08
UBC6YER100W COX19Q3E731 98 aa2.08□□□□□ -2.08
UBC6YER100W RPA190P10964 1664 aaKnown RBP2.08□□□□□ -2.08
UBC6YER100W SIN3P22579 1536 aa2.07□□□□□ -2.08
UBC6YER100W SWR1Q05471 1514 aa2.07□□□□□ -2.08
UBC6YER100W BPT1P14772 1559 aa2.06□□□□□ -2.08
UBC6YER100W SSK2P53599 1579 aa2.06□□□□□ -2.08
UBC6YER100W URB1P34241 1764 aaKnown RBP2.06□□□□□ -2.08
UBC6YER100W YHR173CP38864 112 aa2.06□□□□□ -2.08
UBC6YER100W BNI1P41832 1953 aa2.06□□□□□ -2.08
UBC6YER100W LAA1P39526 2014 aa2.06□□□□□ -2.08
UBC6YER100W NHP2P32495 156 aaPredicted RBP2.05□□□□□ -2.08
UBC6YER100W YLR307C-AQ3E825 87 aa2.05□□□□□ -2.08
UBC6YER100W STU1P38198 1513 aa2.05□□□□□ -2.08
UBC6YER100W MON2P48563 1636 aaPredicted RBP2.05□□□□□ -2.08
UBC6YER100W POL1P13382 1468 aa2.04□□□□□ -2.08
UBC6YER100W SEC7P11075 2009 aaKnown RBP2.03□□□□□ -2.08
UBC6YER100W ESP1Q03018 1630 aa2.03□□□□□ -2.08
UBC6YER100W UFD4P33202 1483 aa2.03□□□□□ -2.08
UBC6YER100W SMC4Q12267 1418 aa2.03□□□□□ -2.08
UBC6YER100W YBR292CP38357 123 aa2.03□□□□□ -2.08
UBC6YER100W YBR072C-AQ3E794 53 aa2.03□□□□□ -2.08
UBC6YER100W MYO4P32492 1471 aa2.02□□□□□ -2.09
UBC6YER100W SEC16P48415 2195 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 56 ms