RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W SPC1P46965 94 aa2.84□□□□□ -1.95
SPT3YDR392W SDS23P53172 527 aa2.84□□□□□ -1.95
SPT3YDR392W TOM7P53507 60 aa2.84□□□□□ -1.95
SPT3YDR392W POP3P53833 195 aaPredicted RBP2.84□□□□□ -1.95
SPT3YDR392W YMR007WQ03675 126 aa2.84□□□□□ -1.95
SPT3YDR392W LPP1Q04396 274 aa2.84□□□□□ -1.95
SPT3YDR392W YBL112CQ3E7Y4 105 aa2.84□□□□□ -1.95
SPT3YDR392W YDR157WA0A023PZE8 133 aa2.83□□□□□ -1.96
SPT3YDR392W CYC3P06182 269 aa2.83□□□□□ -1.96
SPT3YDR392W YBR121C-AP0C5L4 52 aa2.83□□□□□ -1.96
SPT3YDR392W HMRA1P0CY11 126 aa2.83□□□□□ -1.96
SPT3YDR392W CPT1P17898 393 aa2.83□□□□□ -1.96
SPT3YDR392W MRPL20P22354 195 aaPredicted RBP2.83□□□□□ -1.96
SPT3YDR392W YCR022CP25620 114 aa2.83□□□□□ -1.96
SPT3YDR392W YER181CP40097 107 aa2.83□□□□□ -1.96
SPT3YDR392W CCS1P40202 249 aaKnown RBP2.83□□□□□ -1.96
SPT3YDR392W UBC7Q02159 165 aa2.83□□□□□ -1.96
SPT3YDR392W BET5Q03630 159 aa2.83□□□□□ -1.96
SPT3YDR392W RAV2Q03956 351 aa2.83□□□□□ -1.96
SPT3YDR392W YLR302CO13544 120 aa2.82□□□□□ -1.96
SPT3YDR392W YCR025CP25352 136 aa2.82□□□□□ -1.96
SPT3YDR392W YPL073CP40323 161 aa2.82□□□□□ -1.96
SPT3YDR392W YFR045WP43617 309 aa2.82□□□□□ -1.96
SPT3YDR392W YIP3P53633 176 aa2.82□□□□□ -1.96
SPT3YDR392W IRC23Q08416 157 aa2.82□□□□□ -1.96
SPT3YDR392W HHF1P02309 103 aaKnown RBP2.81□□□□□ -1.96
SPT3YDR392W RPL23AP0CX41 137 aaKnown RBP2.81□□□□□ -1.96
SPT3YDR392W RPL23BP0CX42 137 aaKnown RBP2.81□□□□□ -1.96
SPT3YDR392W QRI5P32344 111 aa2.81□□□□□ -1.96
SPT3YDR392W YKR045CP36138 183 aa2.81□□□□□ -1.96
SPT3YDR392W ABF2Q02486 183 aa2.81□□□□□ -1.96
SPT3YDR392W COF1Q03048 143 aaKnown RBP2.81□□□□□ -1.96
SPT3YDR392W PBA1Q05778 276 aa2.81□□□□□ -1.96
SPT3YDR392W DGA1Q08650 418 aa2.81□□□□□ -1.96
SPT3YDR392W YLR365WQ7LIF2 110 aa2.81□□□□□ -1.96
SPT3YDR392W ECM12O13529 151 aa2.8□□□□□ -1.96
SPT3YDR392W HSP12P22943 109 aaKnown RBP2.8□□□□□ -1.96
SPT3YDR392W YKL044WP36092 106 aa2.8□□□□□ -1.96
SPT3YDR392W SRP14P38985 146 aa2.8□□□□□ -1.96
SPT3YDR392W PAU7P39545 55 aa2.8□□□□□ -1.96
SPT3YDR392W YAR068WP39564 161 aa2.8□□□□□ -1.96
SPT3YDR392W YGR269WP40326 108 aa2.8□□□□□ -1.96
SPT3YDR392W SWT21P53873 357 aaPredicted RBP2.8□□□□□ -1.96
SPT3YDR392W YLR296WQ05898 108 aa2.8□□□□□ -1.96
SPT3YDR392W YOR292CQ08743 309 aa2.8□□□□□ -1.96
SPT3YDR392W YDR029WQ12111 104 aa2.8□□□□□ -1.96
SPT3YDR392W HUG1Q6Q5K6 68 aa2.8□□□□□ -1.96
SPT3YDR392W COX10P21592 462 aa2.79□□□□□ -1.96
SPT3YDR392W RPA12P32529 125 aaKnown RBP2.79□□□□□ -1.96
SPT3YDR392W DSK2P48510 373 aa2.79□□□□□ -1.96
SPT3YDR392W KNH1P50112 268 aa2.79□□□□□ -1.96
SPT3YDR392W AIM11P87275 137 aa2.79□□□□□ -1.96
SPT3YDR392W DAD1Q12248 94 aa2.79□□□□□ -1.96
SPT3YDR392W YKL023C-AQ2V2P3 75 aa2.79□□□□□ -1.96
SPT3YDR392W YCR085WP25650 117 aa2.78□□□□□ -1.96
SPT3YDR392W YBR090CP38253 122 aa2.78□□□□□ -1.96
SPT3YDR392W ERG28P40030 148 aa2.78□□□□□ -1.96
SPT3YDR392W YER076CP40049 302 aa2.78□□□□□ -1.96
SPT3YDR392W LCB3P47013 409 aa2.78□□□□□ -1.96
SPT3YDR392W MRX11Q03079 207 aa2.78□□□□□ -1.96
SPT3YDR392W FCF1Q05498 189 aaPredicted RBP2.78□□□□□ -1.96
SPT3YDR392W YOR186WQ08560 144 aa2.78□□□□□ -1.96
SPT3YDR392W TIM18Q08749 192 aa2.78□□□□□ -1.96
SPT3YDR392W POC4Q12245 148 aaPredicted RBP2.78□□□□□ -1.96
SPT3YDR392W YBR126W-AQ8TGU7 68 aa2.78□□□□□ -1.96
SPT3YDR392W ENV10Q99382 181 aa2.78□□□□□ -1.96
SPT3YDR392W YER039C-AP0CD97 72 aa2.77□□□□□ -1.97
SPT3YDR392W KRE1P17260 313 aa2.77□□□□□ -1.97
SPT3YDR392W RPB7P34087 171 aa2.77□□□□□ -1.97
SPT3YDR392W YHR173CP38864 112 aa2.77□□□□□ -1.97
SPT3YDR392W SNF11P38956 169 aa2.77□□□□□ -1.97
SPT3YDR392W YGR050CP53231 118 aa2.77□□□□□ -1.97
SPT3YDR392W LSM6Q06406 86 aaKnown RBP2.77□□□□□ -1.97
SPT3YDR392W YPR108W-AQ3E7B3 70 aa2.77□□□□□ -1.97
SPT3YDR392W YFL041W-AQ3E817 63 aa2.77□□□□□ -1.97
SPT3YDR392W YMR316C-AI2HB70 103 aa2.76□□□□□ -1.97
SPT3YDR392W RTC6O14464 93 aa2.76□□□□□ -1.97
SPT3YDR392W RPS11AP0CX47 156 aaKnown RBP2.76□□□□□ -1.97
SPT3YDR392W RPS11BP0CX48 156 aaKnown RBP2.76□□□□□ -1.97
SPT3YDR392W YKR041WP36134 250 aa2.76□□□□□ -1.97
SPT3YDR392W RPL32P38061 130 aaKnown RBP2.76□□□□□ -1.97
SPT3YDR392W SFT2P38166 215 aa2.76□□□□□ -1.97
SPT3YDR392W DSE2P38844 325 aa2.76□□□□□ -1.97
SPT3YDR392W SBH1P52870 82 aa2.76□□□□□ -1.97
SPT3YDR392W BRP1P53194 125 aa2.76□□□□□ -1.97
SPT3YDR392W ATP19P81451 68 aa2.76□□□□□ -1.97
SPT3YDR392W YIL014C-AQ02598 104 aa2.76□□□□□ -1.97
SPT3YDR392W YDR042CQ03205 200 aa2.76□□□□□ -1.97
SPT3YDR392W AIM34Q03673 198 aa2.76□□□□□ -1.97
SPT3YDR392W YLR042CQ07990 161 aa2.76□□□□□ -1.97
SPT3YDR392W YPL261CQ08976 102 aa2.76□□□□□ -1.97
SPT3YDR392W YAL063C-AQ3E791 96 aa2.76□□□□□ -1.97
SPT3YDR392W RPS28BP0C0X0 67 aaKnown RBP2.75□□□□□ -1.97
SPT3YDR392W MRPL31P14063 131 aaPredicted RBP2.75□□□□□ -1.97
SPT3YDR392W YHL042WP38729 150 aa2.75□□□□□ -1.97
SPT3YDR392W HUA1P40325 198 aa2.75□□□□□ -1.97
SPT3YDR392W VHS2P40463 436 aa2.75□□□□□ -1.97
SPT3YDR392W LST8P41318 303 aa2.75□□□□□ -1.97
SPT3YDR392W SKI6P46948 246 aaPredicted RBP2.75□□□□□ -1.97
SPT3YDR392W MRPS8Q03799 155 aa2.75□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms