RNA–Protein interactions for RNA: YDR291W

HRQ1, Transcript of 3'-5' DNA helicase that has DNA strand annealing activity, yeast

Gene HRQ1, Length 3,234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRQ1	YDR291W	TRP1	P00912	224 aa		4.63	□□□□□ -1.67
HRQ1	YDR291W	RPS8A	P0CX39	200 aa	Known RBP	4.63	□□□□□ -1.67
HRQ1	YDR291W	RPS8B	P0CX40	200 aa	Known RBP	4.63	□□□□□ -1.67
HRQ1	YDR291W	MSN1	P22148	382 aa		4.63	□□□□□ -1.67
HRQ1	YDR291W	AIM11	P87275	137 aa		4.63	□□□□□ -1.67
HRQ1	YDR291W	ECM33	P38248	429 aa	Known RBP	4.63	□□□□□ -1.67
HRQ1	YDR291W	URM1	P40554	99 aa	Predicted RBP	4.63	□□□□□ -1.67
HRQ1	YDR291W	MSA1	Q08471	629 aa		4.63	□□□□□ -1.67
HRQ1	YDR291W	YIL102C-A	Q2V2P5	75 aa		4.63	□□□□□ -1.67
HRQ1	YDR291W	UBC5	P15732	148 aa		4.62	□□□□□ -1.67
HRQ1	YDR291W	SCW10	Q04951	389 aa		4.62	□□□□□ -1.67
HRQ1	YDR291W	CCW14	O13547	238 aa		4.62	□□□□□ -1.67
HRQ1	YDR291W	Q0255	P03881	472 aa		4.62	□□□□□ -1.67
HRQ1	YDR291W	ALG13	P53178	202 aa		4.61	□□□□□ -1.67
HRQ1	YDR291W	YLR194C	Q05777	254 aa		4.61	□□□□□ -1.67
HRQ1	YDR291W	RPL2A	P0CX45	254 aa	Known RBP	4.61	□□□□□ -1.67
HRQ1	YDR291W	RPL2B	P0CX46	254 aa	Known RBP	4.61	□□□□□ -1.67
HRQ1	YDR291W	NUM1	Q00402	2748 aa		4.61	□□□□□ -1.67
HRQ1	YDR291W	VTC1	P40046	129 aa	RIP-Chip data	4.61	□□□□□ -1.67	not detected
HRQ1	YDR291W	YPL261C	Q08976	102 aa		4.61	□□□□□ -1.67
HRQ1	YDR291W	ISU2	Q12056	156 aa		4.61	□□□□□ -1.67
HRQ1	YDR291W	YML079W	Q03629	201 aa		4.6	□□□□□ -1.67
HRQ1	YDR291W	TMA7	Q3E764	64 aa	Known RBP	4.59	□□□□□ -1.67
HRQ1	YDR291W	RPL32	P38061	130 aa	Known RBP	4.59	□□□□□ -1.67
HRQ1	YDR291W	RPF1	P38805	295 aa	Known RBP	4.59	□□□□□ -1.67
HRQ1	YDR291W	RRG8	Q06109	277 aa		4.59	□□□□□ -1.67
HRQ1	YDR291W	KRE9	P39005	276 aa		4.59	□□□□□ -1.68
HRQ1	YDR291W	YNL217W	P40152	326 aa		4.59	□□□□□ -1.68
HRQ1	YDR291W	IGO2	Q9P305	131 aa		4.59	□□□□□ -1.68
HRQ1	YDR291W	YBR144C	P34215	104 aa		4.58	□□□□□ -1.68
HRQ1	YDR291W	YDR274C	P87283	123 aa		4.58	□□□□□ -1.68
HRQ1	YDR291W	AGE2	P40529	298 aa		4.58	□□□□□ -1.68
HRQ1	YDR291W	YOR097C	Q12274	175 aa	Predicted RBP	4.57	□□□□□ -1.68
HRQ1	YDR291W	ATP15	P21306	62 aa		4.57	□□□□□ -1.68
HRQ1	YDR291W	OXA1	P39952	402 aa		4.57	□□□□□ -1.68
HRQ1	YDR291W	YEL008W	P40001	126 aa		4.56	□□□□□ -1.68
HRQ1	YDR291W	CIN5	P40917	295 aa		4.56	□□□□□ -1.68
HRQ1	YDR291W	YPS5	P53057	165 aa		4.56	□□□□□ -1.68
HRQ1	YDR291W	CPR1	P14832	162 aa	Known RBP	4.56	□□□□□ -1.68
HRQ1	YDR291W	YFR057W	P43625	151 aa		4.56	□□□□□ -1.68
HRQ1	YDR291W	ELC1	Q03071	99 aa		4.56	□□□□□ -1.68
HRQ1	YDR291W	RTG1	P32607	177 aa		4.55	□□□□□ -1.68
HRQ1	YDR291W	MLF3	P32047	452 aa		4.55	□□□□□ -1.68
HRQ1	YDR291W	POP7	P38291	140 aa		4.55	□□□□□ -1.68
HRQ1	YDR291W	PEX17	P40155	199 aa		4.55	□□□□□ -1.68
HRQ1	YDR291W	RDS3	Q06835	107 aa	Predicted RBP	4.54	□□□□□ -1.68
HRQ1	YDR291W	YGR240C-A	Q3E786	66 aa		4.54	□□□□□ -1.68
HRQ1	YDR291W	SHU1	P38751	150 aa		4.53	□□□□□ -1.68
HRQ1	YDR291W	YER181C	P40097	107 aa		4.53	□□□□□ -1.68
HRQ1	YDR291W	YGR035W-A	Q45U48	73 aa		4.53	□□□□□ -1.68
HRQ1	YDR291W	YBR126W-A	Q8TGU7	68 aa		4.53	□□□□□ -1.68
HRQ1	YDR291W	PAI3	P01094	68 aa		4.52	□□□□□ -1.69
HRQ1	YDR291W	YBR219C	P38317	127 aa		4.52	□□□□□ -1.69
HRQ1	YDR291W	YAR029W	P39549	74 aa		4.52	□□□□□ -1.69
HRQ1	YDR291W	COX12	Q01519	83 aa		4.52	□□□□□ -1.69
HRQ1	YDR291W	UGX2	P32772	223 aa		4.51	□□□□□ -1.69
HRQ1	YDR291W	PMP3	P87284	55 aa		4.51	□□□□□ -1.69
HRQ1	YDR291W	HYP2	P23301	157 aa	Known RBP	4.51	□□□□□ -1.69
HRQ1	YDR291W	LSM6	Q06406	86 aa	Known RBP	4.51	□□□□□ -1.69
HRQ1	YDR291W	VAM10	Q08474	114 aa		4.51	□□□□□ -1.69
HRQ1	YDR291W	YMR122W-A	Q3E842	84 aa		4.51	□□□□□ -1.69
HRQ1	YDR291W	YCL042W	P25572	119 aa		4.51	□□□□□ -1.69
HRQ1	YDR291W	YER085C	P40058	173 aa		4.51	□□□□□ -1.69
HRQ1	YDR291W	QCR8	P08525	94 aa		4.5	□□□□□ -1.69
HRQ1	YDR291W	ANB1	P19211	157 aa		4.5	□□□□□ -1.69
HRQ1	YDR291W	ARC15	P40518	154 aa	RIP-Chip data	4.5	□□□□□ -1.69	not detected
HRQ1	YDR291W	YDL186W	P48568	277 aa		4.5	□□□□□ -1.69
HRQ1	YDR291W	AIM29	P36154	155 aa		4.5	□□□□□ -1.69
HRQ1	YDR291W	YMR295C	Q03559	197 aa		4.5	□□□□□ -1.69
HRQ1	YDR291W	RPL28	P02406	149 aa	Known RBP	4.49	□□□□□ -1.69
HRQ1	YDR291W	COX14	P39103	70 aa		4.49	□□□□□ -1.69
HRQ1	YDR291W	YNL190W	P53872	204 aa		4.49	□□□□□ -1.69
HRQ1	YDR291W	DUT1	P33317	147 aa		4.48	□□□□□ -1.69
HRQ1	YDR291W	YPT53	P36019	220 aa		4.48	□□□□□ -1.69
HRQ1	YDR291W	RPL18A	P0CX49	186 aa	Known RBP	4.48	□□□□□ -1.69
HRQ1	YDR291W	RPL18B	P0CX50	186 aa	Known RBP	4.48	□□□□□ -1.69
HRQ1	YDR291W	YGL088W	P53151	121 aa		4.48	□□□□□ -1.69
HRQ1	YDR291W	UBC11	P52492	156 aa		4.47	□□□□□ -1.69
HRQ1	YDR291W	CDC43	P18898	376 aa		4.47	□□□□□ -1.69
HRQ1	YDR291W	TOA2	P32774	122 aa		4.46	□□□□□ -1.69
HRQ1	YDR291W	YBR209W	P38311	105 aa		4.46	□□□□□ -1.69
HRQ1	YDR291W	NRG2	P38082	220 aa		4.46	□□□□□ -1.7
HRQ1	YDR291W	YAL065C	O13511	128 aa		4.46	□□□□□ -1.7
HRQ1	YDR291W	ERI1	P62651	68 aa	Known RBP	4.46	□□□□□ -1.7
HRQ1	YDR291W	ADH1	P00330	348 aa	Known RBP	4.45	□□□□□ -1.7
HRQ1	YDR291W	RPR2	P40571	144 aa		4.45	□□□□□ -1.7
HRQ1	YDR291W	YCR075W-A	Q3E830	75 aa		4.45	□□□□□ -1.7
HRQ1	YDR291W	ARO2	P28777	376 aa	Known RBP	4.45	□□□□□ -1.7
HRQ1	YDR291W	YCL021W-A	Q96VH3	125 aa		4.45	□□□□□ -1.7
HRQ1	YDR291W	YCR001W	P25347	104 aa		4.44	□□□□□ -1.7
HRQ1	YDR291W	ERG28	P40030	148 aa		4.44	□□□□□ -1.7
HRQ1	YDR291W	RPL33A	P05744	107 aa	Known RBP	4.44	□□□□□ -1.7
HRQ1	YDR291W	YIL059C	P40520	121 aa		4.44	□□□□□ -1.7
HRQ1	YDR291W	RPL33B	P41056	107 aa	Known RBP	4.44	□□□□□ -1.7
HRQ1	YDR291W	EOS1	P53938	366 aa		4.44	□□□□□ -1.7
HRQ1	YDR291W	AUA1	P32450	94 aa		4.44	□□□□□ -1.7
HRQ1	YDR291W	CWP2	P43497	92 aa		4.43	□□□□□ -1.7
HRQ1	YDR291W	RGM1	Q00453	211 aa		4.43	□□□□□ -1.7
HRQ1	YDR291W	MID2	P36027	376 aa		4.43	□□□□□ -1.7
HRQ1	YDR291W	YDL241W	Q07738	123 aa		4.43	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 106.3 ms