RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C YMR175W-AQ3E766 64 aa1.89□□□□□ -2.11
SOK1YDR006C RPS25BP0C0T4 108 aaKnown RBP1.89□□□□□ -2.11
SOK1YDR006C YIL134C-AQ45U18 67 aa1.89□□□□□ -2.11
SOK1YDR006C PAI3P01094 68 aa1.88□□□□□ -2.11
SOK1YDR006C PAU1P0CE88 120 aa1.88□□□□□ -2.11
SOK1YDR006C PAU14P0CE89 120 aa1.88□□□□□ -2.11
SOK1YDR006C STF2P16965 84 aa1.88□□□□□ -2.11
SOK1YDR006C CUE4Q04201 117 aaPredicted RBP1.88□□□□□ -2.11
SOK1YDR006C YPR153WQ06537 140 aa1.88□□□□□ -2.11
SOK1YDR006C RPS19AP07280 144 aaKnown RBP1.87□□□□□ -2.11
SOK1YDR006C RPS19BP07281 144 aaPredicted RBP1.87□□□□□ -2.11
SOK1YDR006C MRPL38P35996 138 aaPredicted RBP1.87□□□□□ -2.11
SOK1YDR006C RSM18P40033 138 aa1.87□□□□□ -2.11
SOK1YDR006C YDR119W-AQ2V2P9 66 aa1.87□□□□□ -2.11
SOK1YDR006C POL1P13382 1468 aa1.87□□□□□ -2.11
SOK1YDR006C YHR173CP38864 112 aa1.87□□□□□ -2.11
SOK1YDR006C ATP19P81451 68 aa1.87□□□□□ -2.11
SOK1YDR006C RPS25AQ3E792 108 aaPredicted RBP1.87□□□□□ -2.11
SOK1YDR006C HAP1P0CE41 1502 aa1.87□□□□□ -2.11
SOK1YDR006C YPK9Q12697 1472 aa1.86□□□□□ -2.11
SOK1YDR006C TY1B-NL2Q99337 1749 aaKnown RBP1.86□□□□□ -2.11
SOK1YDR006C YBR209WP38311 105 aa1.86□□□□□ -2.11
SOK1YDR006C YBR292CP38357 123 aa1.86□□□□□ -2.11
SOK1YDR006C YHR022CP38763 256 aa1.86□□□□□ -2.11
SOK1YDR006C MIX14Q04341 121 aa1.86□□□□□ -2.11
SOK1YDR006C LSM6Q06406 86 aaKnown RBP1.86□□□□□ -2.11
SOK1YDR006C TY3B-IQ7LHG5 1498 aaKnown RBP1.86□□□□□ -2.11
SOK1YDR006C STT4P37297 1900 aa1.86□□□□□ -2.11
SOK1YDR006C YRF1-2P40105 1681 aa1.86□□□□□ -2.11
SOK1YDR006C YIL163CP40448 117 aa1.85□□□□□ -2.11
SOK1YDR006C MRPS12P53732 153 aa1.85□□□□□ -2.11
SOK1YDR006C YIL156W-BQ2V2P4 73 aa1.85□□□□□ -2.11
SOK1YDR006C YCR095W-AQ3E787 52 aa1.85□□□□□ -2.11
SOK1YDR006C UBR2Q07963 1872 aa1.85□□□□□ -2.11
SOK1YDR006C RPO31P04051 1460 aa1.85□□□□□ -2.11
SOK1YDR006C RPL36BO14455 100 aaKnown RBP1.85□□□□□ -2.11
SOK1YDR006C RPL36AP05745 100 aaPredicted RBP1.85□□□□□ -2.11
SOK1YDR006C NRG2P38082 220 aa1.85□□□□□ -2.11
SOK1YDR006C SCC2Q04002 1493 aa1.84□□□□□ -2.11
SOK1YDR006C YBL071CP38185 102 aa1.84□□□□□ -2.11
SOK1YDR006C YBR219CP38317 127 aa1.84□□□□□ -2.11
SOK1YDR006C POR2P40478 281 aa1.84□□□□□ -2.11
SOK1YDR006C YJL144WP47009 104 aa1.84□□□□□ -2.11
SOK1YDR006C MLP1Q02455 1875 aaKnown RBP1.84□□□□□ -2.11
SOK1YDR006C YLR255CO13574 117 aa1.84□□□□□ -2.12
SOK1YDR006C ATX1P38636 73 aa1.84□□□□□ -2.12
SOK1YDR006C VMA21P41806 77 aa1.84□□□□□ -2.12
SOK1YDR006C YMR030W-AQ3E760 96 aa1.84□□□□□ -2.12
SOK1YDR006C YNR034W-AQ3E841 98 aa1.84□□□□□ -2.12
SOK1YDR006C DNA2P38859 1522 aa1.83□□□□□ -2.12
SOK1YDR006C YNL198CP40166 100 aa1.83□□□□□ -2.12
SOK1YDR006C PAU23Q07987 124 aa1.83□□□□□ -2.12
SOK1YDR006C VAM10Q08474 114 aa1.83□□□□□ -2.12
SOK1YDR006C PAU17Q12370 124 aa1.83□□□□□ -2.12
SOK1YDR006C TY1B-GR3Q12316 1755 aa1.83□□□□□ -2.12
SOK1YDR006C TY1B-ORQ92393 1755 aa1.83□□□□□ -2.12
SOK1YDR006C AQY2P0CD90 149 aa1.83□□□□□ -2.12
SOK1YDR006C ECM29P38737 1868 aa1.83□□□□□ -2.12
SOK1YDR006C RDS3Q06835 107 aaPredicted RBP1.83□□□□□ -2.12
SOK1YDR006C CCW12Q12127 133 aa1.83□□□□□ -2.12
SOK1YDR006C TAO3P40468 2376 aa1.83□□□□□ -2.12
SOK1YDR006C GEA1P47102 1408 aaPredicted RBP1.83□□□□□ -2.12
SOK1YDR006C YSF3P0C074 85 aaPredicted RBP1.82□□□□□ -2.12
SOK1YDR006C SED1Q01589 338 aa1.82□□□□□ -2.12
SOK1YDR006C YDL157CQ12082 118 aa1.82□□□□□ -2.12
SOK1YDR006C RPA190P10964 1664 aaKnown RBP1.82□□□□□ -2.12
SOK1YDR006C CYT2Q00873 224 aa1.82□□□□□ -2.12
SOK1YDR006C MET31Q03081 177 aa1.82□□□□□ -2.12
SOK1YDR006C YKL018C-AQ3E7A7 99 aa1.82□□□□□ -2.12
SOK1YDR006C NUP159P40477 1460 aa1.82□□□□□ -2.12
SOK1YDR006C YBR027CP38220 110 aa1.82□□□□□ -2.12
SOK1YDR006C YDL012CQ12489 107 aa1.82□□□□□ -2.12
SOK1YDR006C GIS2P53849 153 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
SOK1YDR006C YLR162WQ06235 118 aa1.81□□□□□ -2.12
SOK1YDR006C PRP8P33334 2413 aaKnown RBP1.81□□□□□ -2.12
SOK1YDR006C FAS2P19097 1887 aaKnown RBP1.81□□□□□ -2.12
SOK1YDR006C RPL22AP05749 121 aaKnown RBP1.81□□□□□ -2.12
SOK1YDR006C MIC27P50945 234 aa1.81□□□□□ -2.12
SOK1YDR006C YDR010CQ12426 110 aa1.81□□□□□ -2.12
SOK1YDR006C GDB1Q06625 1536 aa1.8□□□□□ -2.12
SOK1YDR006C YDR381C-AQ3E6R5 114 aa1.8□□□□□ -2.12
SOK1YDR006C COA3Q3E7B2 85 aa1.8□□□□□ -2.12
SOK1YDR006C TY1B-JR2P47100 1755 aaKnown RBP1.79□□□□□ -2.12
SOK1YDR006C TY1B-ER2Q03619 1755 aa1.79□□□□□ -2.12
SOK1YDR006C TY1B-MR1Q04214 1755 aa1.79□□□□□ -2.12
SOK1YDR006C TY1B-MR2Q04670 1755 aaKnown RBP1.79□□□□□ -2.12
SOK1YDR006C TY1B-LR1Q12088 1755 aaKnown RBP1.79□□□□□ -2.12
SOK1YDR006C TY1B-NL1Q12112 1755 aa1.79□□□□□ -2.12
SOK1YDR006C TY1B-GR1Q12141 1755 aa1.79□□□□□ -2.12
SOK1YDR006C TY1B-BLQ12490 1755 aa1.79□□□□□ -2.12
SOK1YDR006C RPL33AP05744 107 aaKnown RBP1.79□□□□□ -2.12
SOK1YDR006C LCL2Q08045 131 aa1.79□□□□□ -2.12
SOK1YDR006C YOR032W-AQ8TGS1 66 aa1.79□□□□□ -2.12
SOK1YDR006C TCB3Q03640 1545 aaKnown RBP1.79□□□□□ -2.12
SOK1YDR006C FPR2P32472 135 aa1.79□□□□□ -2.12
SOK1YDR006C YMR122CQ03879 124 aa1.79□□□□□ -2.12
SOK1YDR006C YOR034C-AQ3E735 80 aa1.79□□□□□ -2.12
SOK1YDR006C SWR1Q05471 1514 aa1.78□□□□□ -2.12
SOK1YDR006C PFY1P07274 126 aa1.78□□□□□ -2.12
SOK1YDR006C SNA2P56508 79 aa1.78□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms