RNA–Protein interactions for RNA: YCL074W

YCL074W, Transcript of Pseudogene: encodes fragment of Ty Pol protein, yeast

Gene YCL074W, Length 927 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL074W	YCL074W	YEL067C	P39978	195 aa		7.85	□□□□□ -1.15
YCL074W	YCL074W	YNL217W	P40152	326 aa		7.85	□□□□□ -1.15
YCL074W	YCL074W	YJR146W	P47174	117 aa		7.85	□□□□□ -1.15
YCL074W	YCL074W	YNR077C	P53758	84 aa		7.85	□□□□□ -1.15
YCL074W	YCL074W	ISU2	Q12056	156 aa		7.85	□□□□□ -1.15
YCL074W	YCL074W	YDL022C-A	P0C5L6	82 aa		7.84	□□□□□ -1.15
YCL074W	YCL074W	RPS8A	P0CX39	200 aa	Known RBP	7.84	□□□□□ -1.15
YCL074W	YCL074W	RPS8B	P0CX40	200 aa	Known RBP	7.84	□□□□□ -1.15
YCL074W	YCL074W	RPL16A	P26784	199 aa	Known RBP	7.84	□□□□□ -1.15
YCL074W	YCL074W	RUB1	Q03919	77 aa		7.84	□□□□□ -1.15
YCL074W	YCL074W	CCW14	O13547	238 aa		7.83	□□□□□ -1.16
YCL074W	YCL074W	ATP15	P21306	62 aa		7.83	□□□□□ -1.16
YCL074W	YCL074W	YCH1	P42937	148 aa		7.83	□□□□□ -1.16
YCL074W	YCL074W	ALG13	P53178	202 aa		7.83	□□□□□ -1.16
YCL074W	YCL074W	YLR194C	Q05777	254 aa		7.83	□□□□□ -1.16
YCL074W	YCL074W	TAR1	Q8TGM6	124 aa		7.83	□□□□□ -1.16
YCL074W	YCL074W	YOR097C	Q12274	175 aa	Predicted RBP	7.82	□□□□□ -1.16
YCL074W	YCL074W	TRP1	P00912	224 aa		7.81	□□□□□ -1.16
YCL074W	YCL074W	SAP30	P38429	201 aa		7.81	□□□□□ -1.16
YCL074W	YCL074W	RRT13	P40042	185 aa		7.81	□□□□□ -1.16
YCL074W	YCL074W	YFR057W	P43625	151 aa		7.81	□□□□□ -1.16
YCL074W	YCL074W	FIP1	P45976	327 aa		7.81	□□□□□ -1.16
YCL074W	YCL074W	SCW10	Q04951	389 aa		7.81	□□□□□ -1.16
YCL074W	YCL074W	YIL002W-A	Q3E7Z5	69 aa		7.81	□□□□□ -1.16
YCL074W	YCL074W	ADH1	P00330	348 aa	Known RBP	7.8	□□□□□ -1.16
YCL074W	YCL074W	MSA1	Q08471	629 aa		7.8	□□□□□ -1.16
YCL074W	YCL074W	ARO2	P28777	376 aa	Known RBP	7.79	□□□□□ -1.16
YCL074W	YCL074W	POP7	P38291	140 aa		7.79	□□□□□ -1.16
YCL074W	YCL074W	VHS2	P40463	436 aa		7.79	□□□□□ -1.16
YCL074W	YCL074W	AGE2	P40529	298 aa		7.79	□□□□□ -1.16
YCL074W	YCL074W	YFR035C	P43608	114 aa		7.79	□□□□□ -1.16
YCL074W	YCL074W	MEC1	P38111	2368 aa		7.79	□□□□□ -1.16
YCL074W	YCL074W	RPL2A	P0CX45	254 aa	Known RBP	7.78	□□□□□ -1.16
YCL074W	YCL074W	RPL2B	P0CX46	254 aa	Known RBP	7.78	□□□□□ -1.16
YCL074W	YCL074W	CPR1	P14832	162 aa	Known RBP	7.78	□□□□□ -1.16
YCL074W	YCL074W	VTC1	P40046	129 aa	RIP-Chip data	7.78	□□□□□ -1.16	not detected
YCL074W	YCL074W	PEX17	P40155	199 aa		7.78	□□□□□ -1.16
YCL074W	YCL074W	CIN5	P40917	295 aa		7.78	□□□□□ -1.16
YCL074W	YCL074W	RPS11A	P0CX47	156 aa	Known RBP	7.77	□□□□□ -1.17
YCL074W	YCL074W	RPS11B	P0CX48	156 aa	Known RBP	7.77	□□□□□ -1.17
YCL074W	YCL074W	YPT53	P36019	220 aa		7.77	□□□□□ -1.17
YCL074W	YCL074W	YBR209W	P38311	105 aa		7.77	□□□□□ -1.17
YCL074W	YCL074W	YER085C	P40058	173 aa		7.77	□□□□□ -1.17
YCL074W	YCL074W	YPL257W	Q08974	193 aa		7.77	□□□□□ -1.17
YCL074W	YCL074W	MPC2	P38857	129 aa		7.76	□□□□□ -1.17
YCL074W	YCL074W	PMP3	P87284	55 aa		7.76	□□□□□ -1.17
YCL074W	YCL074W	LSM6	Q06406	86 aa	Known RBP	7.76	□□□□□ -1.17
YCL074W	YCL074W	RPL18A	P0CX49	186 aa	Known RBP	7.75	□□□□□ -1.17
YCL074W	YCL074W	RPL18B	P0CX50	186 aa	Known RBP	7.75	□□□□□ -1.17
YCL074W	YCL074W	YHR212W-A	P0CX91	67 aa		7.75	□□□□□ -1.17
YCL074W	YCL074W	MET32	Q12041	191 aa		7.74	□□□□□ -1.17
YCL074W	YCL074W	SLO1	Q3E784	85 aa		7.74	□□□□□ -1.17
YCL074W	YCL074W	YCL021W-A	Q96VH3	125 aa		7.74	□□□□□ -1.17
YCL074W	YCL074W	RPL28	P02406	149 aa	Known RBP	7.73	□□□□□ -1.17
YCL074W	YCL074W	CDC43	P18898	376 aa		7.73	□□□□□ -1.17
YCL074W	YCL074W	NHP2	P32495	156 aa	Predicted RBP	7.73	□□□□□ -1.17
YCL074W	YCL074W	SHU1	P38751	150 aa		7.73	□□□□□ -1.17
YCL074W	YCL074W	YEL008W	P40001	126 aa		7.73	□□□□□ -1.17
YCL074W	YCL074W	YDL186W	P48568	277 aa		7.73	□□□□□ -1.17
YCL074W	YCL074W	YGL088W	P53151	121 aa		7.73	□□□□□ -1.17
YCL074W	YCL074W	MRPS12	P53732	153 aa		7.72	□□□□□ -1.17
YCL074W	YCL074W	UGX2	P32772	223 aa		7.71	□□□□□ -1.18
YCL074W	YCL074W	YBR144C	P34215	104 aa		7.71	□□□□□ -1.18
YCL074W	YCL074W	YIL059C	P40520	121 aa		7.71	□□□□□ -1.18
YCL074W	YCL074W	UBC5	P15732	148 aa		7.7	□□□□□ -1.18
YCL074W	YCL074W	YPS5	P53057	165 aa		7.7	□□□□□ -1.18
YCL074W	YCL074W	YBR126W-A	Q8TGU7	68 aa		7.7	□□□□□ -1.18
YCL074W	YCL074W	QCR8	P08525	94 aa		7.69	□□□□□ -1.18
YCL074W	YCL074W	DUT1	P33317	147 aa		7.69	□□□□□ -1.18
YCL074W	YCL074W	YCR075W-A	Q3E830	75 aa		7.69	□□□□□ -1.18
YCL074W	YCL074W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	7.68	□□□□□ -1.18	not detected
YCL074W	YCL074W	TOR1	P35169	2470 aa		7.67	□□□□□ -1.18
YCL074W	YCL074W	CYC7	P00045	113 aa		7.67	□□□□□ -1.18
YCL074W	YCL074W	MID2	P36027	376 aa		7.67	□□□□□ -1.18
YCL074W	YCL074W	SOH1	P38633	127 aa		7.67	□□□□□ -1.18
YCL074W	YCL074W	KRE9	P39005	276 aa		7.67	□□□□□ -1.18
YCL074W	YCL074W	YNL190W	P53872	204 aa		7.67	□□□□□ -1.18
YCL074W	YCL074W	HPA2	Q06592	156 aa		7.67	□□□□□ -1.18
YCL074W	YCL074W	YAR029W	P39549	74 aa		7.66	□□□□□ -1.18
YCL074W	YCL074W	ARC15	P40518	154 aa	RIP-Chip data	7.66	□□□□□ -1.18	not detected
YCL074W	YCL074W	YDR274C	P87283	123 aa		7.65	□□□□□ -1.18
YCL074W	YCL074W	MSN1	P22148	382 aa		7.64	□□□□□ -1.19
YCL074W	YCL074W	ATX1	P38636	73 aa		7.64	□□□□□ -1.19
YCL074W	YCL074W	PPT2	Q12036	173 aa		7.64	□□□□□ -1.19
YCL074W	YCL074W	NRG2	P38082	220 aa		7.63	□□□□□ -1.19
YCL074W	YCL074W	YHR130C	P38834	111 aa		7.63	□□□□□ -1.19
YCL074W	YCL074W	OST2	P46964	130 aa		7.63	□□□□□ -1.19
YCL074W	YCL074W	YGR035W-A	Q45U48	73 aa		7.63	□□□□□ -1.19
YCL074W	YCL074W	YGR240C-A	Q3E786	66 aa		7.62	□□□□□ -1.19
YCL074W	YCL074W	CUP1-1	P0CX80	61 aa		7.61	□□□□□ -1.19
YCL074W	YCL074W	CUP1-2	P0CX81	61 aa		7.61	□□□□□ -1.19
YCL074W	YCL074W	YMR122W-A	Q3E842	84 aa		7.61	□□□□□ -1.19
YCL074W	YCL074W	YCL042W	P25572	119 aa		7.6	□□□□□ -1.19
YCL074W	YCL074W	ERI1	P62651	68 aa	Known RBP	7.6	□□□□□ -1.19
YCL074W	YCL074W	YMR295C	Q03559	197 aa		7.6	□□□□□ -1.19
YCL074W	YCL074W	COX10	P21592	462 aa		7.59	□□□□□ -1.19
YCL074W	YCL074W	EOS1	P53938	366 aa		7.59	□□□□□ -1.19
YCL074W	YCL074W	COX12	Q01519	83 aa		7.59	□□□□□ -1.19
YCL074W	YCL074W	YCR001W	P25347	104 aa		7.58	□□□□□ -1.2
YCL074W	YCL074W	MLF3	P32047	452 aa		7.58	□□□□□ -1.2

Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms