RNA–Protein interactions for RNA: YCL010C

SGF29, Transcript of Component of the HAT/Core module of the SAGA, SLIK, and ADA complexes, yeastyeast

Gene SGF29, Length 780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF29YCL010C YJR146WP47174 117 aa4.45□□□□□ -1.7
SGF29YCL010C MGR2Q02889 113 aa4.45□□□□□ -1.7
SGF29YCL010C YMR320WQ04897 101 aa4.45□□□□□ -1.7
SGF29YCL010C TPT1Q12272 230 aaKnown RBP4.45□□□□□ -1.7
SGF29YCL010C YGL118CP53132 145 aa4.44□□□□□ -1.7
SGF29YCL010C YMR122W-AQ3E842 84 aa4.44□□□□□ -1.7
SGF29YCL010C YCL021W-AQ96VH3 125 aa4.44□□□□□ -1.7
SGF29YCL010C RTC6O14464 93 aa4.43□□□□□ -1.7
SGF29YCL010C SSS1P35179 80 aa4.43□□□□□ -1.7
SGF29YCL010C FYV4P38783 130 aaPredicted RBP4.43□□□□□ -1.7
SGF29YCL010C YEL008WP40001 126 aa4.43□□□□□ -1.7
SGF29YCL010C ERI1P62651 68 aaKnown RBP4.43□□□□□ -1.7
SGF29YCL010C YOR008C-AQ3E7B9 74 aa4.43□□□□□ -1.7
SGF29YCL010C YAL064WP39711 94 aa4.42□□□□□ -1.7
SGF29YCL010C GAT4P40569 121 aa4.42□□□□□ -1.7
SGF29YCL010C POP3P53833 195 aaPredicted RBP4.42□□□□□ -1.7
SGF29YCL010C YDR115WQ04598 105 aa4.42□□□□□ -1.7
SGF29YCL010C SCS22Q6Q595 175 aa4.42□□□□□ -1.7
SGF29YCL010C MRP49P32388 137 aa4.41□□□□□ -1.7
SGF29YCL010C YBR219CP38317 127 aa4.41□□□□□ -1.7
SGF29YCL010C URM1P40554 99 aaPredicted RBP4.41□□□□□ -1.7
SGF29YCL010C ERV14P53173 138 aa4.41□□□□□ -1.7
SGF29YCL010C PKR1Q03880 122 aaKnown RBP4.41□□□□□ -1.7
SGF29YCL010C LCL2Q08045 131 aa4.41□□□□□ -1.7
SGF29YCL010C ERG27Q12452 347 aaKnown RBP4.41□□□□□ -1.7
SGF29YCL010C YIL134C-AQ45U18 67 aa4.41□□□□□ -1.7
SGF29YCL010C YAR023CD6VPM8 179 aa4.4□□□□□ -1.71
SGF29YCL010C ATP15P21306 62 aa4.4□□□□□ -1.71
SGF29YCL010C MRPL11P36521 249 aaPredicted RBP4.4□□□□□ -1.71
SGF29YCL010C YBL081WP38180 368 aaKnown RBP4.4□□□□□ -1.71
SGF29YCL010C TOS6P48560 102 aa4.4□□□□□ -1.71
SGF29YCL010C COA3Q3E7B2 85 aa4.4□□□□□ -1.71
SGF29YCL010C TRP1P00912 224 aa4.39□□□□□ -1.71
SGF29YCL010C OST3P48439 350 aa4.39□□□□□ -1.71
SGF29YCL010C YLR112WQ12130 139 aa4.39□□□□□ -1.71
SGF29YCL010C YPR010C-AA5Z2X5 72 aa4.38□□□□□ -1.71
SGF29YCL010C YMR295CQ03559 197 aa4.38□□□□□ -1.71
SGF29YCL010C YMR103CQ04436 120 aa4.38□□□□□ -1.71
SGF29YCL010C YBR182C-AQ8TGU6 64 aa4.38□□□□□ -1.71
SGF29YCL010C YDR042CQ03205 200 aa4.37□□□□□ -1.71
SGF29YCL010C CUE4Q04201 117 aaPredicted RBP4.37□□□□□ -1.71
SGF29YCL010C MED7Q08278 222 aa4.37□□□□□ -1.71
SGF29YCL010C YDR034C-AP0C289 58 aa4.36□□□□□ -1.71
SGF29YCL010C RPL31AP0C2H8 113 aaKnown RBP4.36□□□□□ -1.71
SGF29YCL010C APS1P35181 156 aa4.35□□□□□ -1.71
SGF29YCL010C ERG28P40030 148 aa4.35□□□□□ -1.71
SGF29YCL010C SNA2P56508 79 aa4.35□□□□□ -1.71
SGF29YCL010C AIM11P87275 137 aa4.35□□□□□ -1.71
SGF29YCL010C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SGF29YCL010C HTL1Q9URQ5 78 aa4.35□□□□□ -1.71
SGF29YCL010C RPL27BP0C2H7 136 aaKnown RBP4.34□□□□□ -1.71
SGF29YCL010C YKL070WP36087 169 aa4.34□□□□□ -1.71
SGF29YCL010C CIN5P40917 295 aa4.34□□□□□ -1.71
SGF29YCL010C GIS2P53849 153 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71 RIP-Chip
SGF29YCL010C CMC2Q3E7A4 109 aa4.34□□□□□ -1.71
SGF29YCL010C ENV10Q99382 181 aa4.34□□□□□ -1.71
SGF29YCL010C YDL022C-AP0C5L6 82 aa4.33□□□□□ -1.72
SGF29YCL010C YPL261CQ08976 102 aa4.33□□□□□ -1.72
SGF29YCL010C ATP16Q12165 160 aa4.33□□□□□ -1.72
SGF29YCL010C RPL18AP0CX49 186 aaKnown RBP4.32□□□□□ -1.72
SGF29YCL010C RPL18BP0CX50 186 aaKnown RBP4.32□□□□□ -1.72
SGF29YCL010C BET5Q03630 159 aa4.32□□□□□ -1.72
SGF29YCL010C YDR029WQ12111 104 aa4.32□□□□□ -1.72
SGF29YCL010C DFM1Q12743 341 aaKnown RBP4.32□□□□□ -1.72
SGF29YCL010C RPL28P02406 149 aaKnown RBP4.31□□□□□ -1.72
SGF29YCL010C PAU16P35994 123 aa4.31□□□□□ -1.72
SGF29YCL010C RPC10P40422 70 aa4.31□□□□□ -1.72
SGF29YCL010C RPL32P38061 130 aaKnown RBP4.3□□□□□ -1.72
SGF29YCL010C SMP1P38128 452 aa4.3□□□□□ -1.72
SGF29YCL010C SHU1P38751 150 aa4.3□□□□□ -1.72
SGF29YCL010C SEC11P15367 167 aa4.29□□□□□ -1.72
SGF29YCL010C YEL067CP39978 195 aa4.29□□□□□ -1.72
SGF29YCL010C VTC1P40046 129 aaRIP-Chip data4.29□□□□□ -1.72not detected
SGF29YCL010C YLR194CQ05777 254 aa4.29□□□□□ -1.72
SGF29YCL010C TMA7Q3E764 64 aaKnown RBP4.29□□□□□ -1.72
SGF29YCL010C MRPL44P19956 98 aa4.28□□□□□ -1.72
SGF29YCL010C YKR041WP36134 250 aa4.28□□□□□ -1.72
SGF29YCL010C YAR029WP39549 74 aa4.28□□□□□ -1.72
SGF29YCL010C MSL1P40567 111 aaPredicted RBP4.28□□□□□ -1.72
SGF29YCL010C HAC1P41546 238 aa4.28□□□□□ -1.72
SGF29YCL010C YNL190WP53872 204 aa4.28□□□□□ -1.72
SGF29YCL010C YMR175W-AQ3E766 64 aa4.28□□□□□ -1.72
SGF29YCL010C YPL229WQ99395 206 aa4.28□□□□□ -1.72
SGF29YCL010C YAL065CO13511 128 aa4.27□□□□□ -1.73
SGF29YCL010C CNL1Q06333 122 aa4.27□□□□□ -1.73
SGF29YCL010C YLR050CQ12155 161 aaKnown RBP4.27□□□□□ -1.73
SGF29YCL010C MID2P36027 376 aa4.26□□□□□ -1.73
SGF29YCL010C COX14P39103 70 aa4.26□□□□□ -1.73
SGF29YCL010C PEX22P39718 180 aa4.26□□□□□ -1.73
SGF29YCL010C YPL073CP40323 161 aa4.26□□□□□ -1.73
SGF29YCL010C CWP2P43497 92 aa4.26□□□□□ -1.73
SGF29YCL010C YGL230CP53074 147 aa4.26□□□□□ -1.73
SGF29YCL010C NAT5Q08689 176 aa4.26□□□□□ -1.73
SGF29YCL010C COA6Q3E846 104 aa4.26□□□□□ -1.73
SGF29YCL010C CDC43P18898 376 aa4.25□□□□□ -1.73
SGF29YCL010C YFR057WP43625 151 aa4.25□□□□□ -1.73
SGF29YCL010C SMD1Q02260 146 aaPredicted RBP4.25□□□□□ -1.73
SGF29YCL010C AQY2P0CD90 149 aa4.24□□□□□ -1.73
SGF29YCL010C FUN14P18411 198 aa4.24□□□□□ -1.73
SGF29YCL010C PEX17P40155 199 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms