RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RGD1	YBR260C	NRM1	P53718	249 aa		4.84	□□□□□ -1.63
RGD1	YBR260C	KTI11	Q3E840	82 aa		4.84	□□□□□ -1.63
RGD1	YBR260C	GLT1	Q12680	2145 aa	Known RBP	4.84	□□□□□ -1.63
RGD1	YBR260C	RRS1	Q08746	203 aa	Known RBP	4.84	□□□□□ -1.64
RGD1	YBR260C	YMR175W-A	Q3E766	64 aa		4.84	□□□□□ -1.64
RGD1	YBR260C	MLF3	P32047	452 aa		4.83	□□□□□ -1.64
RGD1	YBR260C	SIM1	P40472	476 aa		4.83	□□□□□ -1.64
RGD1	YBR260C	HNT3	Q08702	217 aa		4.83	□□□□□ -1.64
RGD1	YBR260C	YKL183C-A	Q3E765	70 aa		4.83	□□□□□ -1.64
RGD1	YBR260C	YBL071C	P38185	102 aa		4.82	□□□□□ -1.64
RGD1	YBR260C	YER187W	P40102	141 aa		4.82	□□□□□ -1.64
RGD1	YBR260C	YNL194C	P40169	301 aa		4.82	□□□□□ -1.64
RGD1	YBR260C	ATP15	P21306	62 aa		4.82	□□□□□ -1.64
RGD1	YBR260C	BET1	P22804	142 aa		4.82	□□□□□ -1.64
RGD1	YBR260C	TOS6	P48560	102 aa		4.82	□□□□□ -1.64
RGD1	YBR260C	YLR281C	Q05863	155 aa		4.82	□□□□□ -1.64
RGD1	YBR260C	SFT1	P43682	97 aa		4.81	□□□□□ -1.64
RGD1	YBR260C	SHH4	Q06236	168 aa		4.81	□□□□□ -1.64
RGD1	YBR260C	YSY6	P38374	65 aa		4.8	□□□□□ -1.64
RGD1	YBR260C	YFL015C	P43578	164 aa		4.8	□□□□□ -1.64
RGD1	YBR260C	YGR219W	P53307	113 aa		4.8	□□□□□ -1.64
RGD1	YBR260C	TDA7	P53882	636 aa	Predicted RBP	4.8	□□□□□ -1.64
RGD1	YBR260C	TOM1	Q03280	3268 aa		4.8	□□□□□ -1.64
RGD1	YBR260C	YHR213W	P0CI67	198 aa		4.8	□□□□□ -1.64
RGD1	YBR260C	SPI1	P40092	148 aa		4.8	□□□□□ -1.64
RGD1	YBR260C	REE1	P40893	198 aa		4.8	□□□□□ -1.64
RGD1	YBR260C	GLO1	P50107	326 aa		4.8	□□□□□ -1.64
RGD1	YBR260C	MRPS12	P53732	153 aa		4.8	□□□□□ -1.64
RGD1	YBR260C	YOR029W	Q12243	111 aa		4.8	□□□□□ -1.64
RGD1	YBR260C	EMC6	Q12431	108 aa		4.8	□□□□□ -1.64
RGD1	YBR260C	RPL11B	Q3E757	174 aa	Predicted RBP	4.8	□□□□□ -1.64
RGD1	YBR260C	LDB16	P25587	256 aa		4.79	□□□□□ -1.64
RGD1	YBR260C	MTC6	P38849	526 aa		4.79	□□□□□ -1.64
RGD1	YBR260C	YAR029W	P39549	74 aa		4.79	□□□□□ -1.64
RGD1	YBR260C	RPS26B	P39939	119 aa	Known RBP	4.79	□□□□□ -1.64
RGD1	YBR260C	GAT3	Q07928	141 aa		4.79	□□□□□ -1.64
RGD1	YBR260C	YLR412C-A	Q3E742	68 aa		4.79	□□□□□ -1.64
RGD1	YBR260C	RPL16B	P26785	198 aa	Known RBP	4.79	□□□□□ -1.64
RGD1	YBR260C	MPC2	P38857	129 aa		4.79	□□□□□ -1.64
RGD1	YBR260C	RPL11A	P0C0W9	174 aa	Known RBP	4.78	□□□□□ -1.64
RGD1	YBR260C	SAP30	P38429	201 aa		4.78	□□□□□ -1.64
RGD1	YBR260C	YFL019C	P43576	117 aa		4.78	□□□□□ -1.64
RGD1	YBR260C	YLR342W-A	Q3E810	57 aa		4.78	□□□□□ -1.64
RGD1	YBR260C	RRT15	Q3E811	62 aa		4.78	□□□□□ -1.64
RGD1	YBR260C	PGU1	P47180	361 aa		4.77	□□□□□ -1.65
RGD1	YBR260C	SDC1	Q03323	175 aa		4.77	□□□□□ -1.65
RGD1	YBR260C	YHR214C-D	P0CX93	97 aa		4.77	□□□□□ -1.65
RGD1	YBR260C	FPR1	P20081	114 aa	Known RBP	4.77	□□□□□ -1.65
RGD1	YBR260C	HAL1	Q01766	294 aa		4.77	□□□□□ -1.65
RGD1	YBR260C	YDR246W-A	Q3E763	66 aa		4.77	□□□□□ -1.65
RGD1	YBR260C	YOR008C-A	Q3E7B9	74 aa		4.76	□□□□□ -1.65
RGD1	YBR260C	FAS1	P07149	2051 aa	Known RBP	4.76	□□□□□ -1.65
RGD1	YBR260C	YKR073C	P36153	106 aa		4.75	□□□□□ -1.65
RGD1	YBR260C	IMP2	P46972	177 aa		4.75	□□□□□ -1.65
RGD1	YBR260C	SUT1	P53032	299 aa	Known RBP	4.75	□□□□□ -1.65
RGD1	YBR260C	SNP1	Q00916	300 aa	Predicted RBP	4.75	□□□□□ -1.65
RGD1	YBR260C	YML122C	Q03207	126 aa		4.75	□□□□□ -1.65
RGD1	YBR260C	PPT2	Q12036	173 aa		4.75	□□□□□ -1.65
RGD1	YBR260C	UBC4	P15731	148 aa		4.75	□□□□□ -1.65
RGD1	YBR260C	YKR045C	P36138	183 aa		4.75	□□□□□ -1.65
RGD1	YBR260C	KRE9	P39005	276 aa		4.75	□□□□□ -1.65
RGD1	YBR260C	HUR1	P45820	110 aa		4.75	□□□□□ -1.65
RGD1	YBR260C	YGR164W	P53291	111 aa		4.75	□□□□□ -1.65
RGD1	YBR260C	YLR285C-A	Q3E771	56 aa		4.75	□□□□□ -1.65
RGD1	YBR260C	TDA8	Q6B2U8	126 aa		4.75	□□□□□ -1.65
RGD1	YBR260C	RPL15A	P05748	204 aa	Known RBP	4.74	□□□□□ -1.65
RGD1	YBR260C	MSA2	P36157	363 aa		4.74	□□□□□ -1.65
RGD1	YBR260C	DCV1	P43595	202 aa		4.74	□□□□□ -1.65
RGD1	YBR260C	URM1	P40554	99 aa	Predicted RBP	4.73	□□□□□ -1.65
RGD1	YBR260C	YOR034C-A	Q3E735	80 aa		4.73	□□□□□ -1.65
RGD1	YBR260C	YNL277W-A	Q3E7Z0	62 aa		4.73	□□□□□ -1.65
RGD1	YBR260C	LEE1	Q02799	301 aa	Known RBP	4.73	□□□□□ -1.65
RGD1	YBR260C	YOR268C	Q08734	132 aa		4.73	□□□□□ -1.65
RGD1	YBR260C	PIR5	P46999	287 aa		4.72	□□□□□ -1.65
RGD1	YBR260C	YIL046W-A	Q3E7Z4	54 aa		4.72	□□□□□ -1.65
RGD1	YBR260C	YLR156W	P0CE96	114 aa		4.72	□□□□□ -1.65
RGD1	YBR260C	YLR159W	P0CE97	114 aa		4.72	□□□□□ -1.65
RGD1	YBR260C	YLR161W	P0CE98	114 aa		4.72	□□□□□ -1.65
RGD1	YBR260C	YIL086C	P40503	102 aa		4.72	□□□□□ -1.65
RGD1	YBR260C	YJL027C	P47063	138 aa	Predicted RBP	4.72	□□□□□ -1.65
RGD1	YBR260C	EDC1	P53080	175 aa	Predicted RBP	4.72	□□□□□ -1.65
RGD1	YBR260C	RNH203	Q12338	110 aa		4.72	□□□□□ -1.65
RGD1	YBR260C	AIM4	P38305	123 aa	Predicted RBP	4.71	□□□□□ -1.66
RGD1	YBR260C	YHR022C	P38763	256 aa		4.71	□□□□□ -1.66
RGD1	YBR260C	RPS26A	P39938	119 aa	Known RBP	4.71	□□□□□ -1.66
RGD1	YBR260C	YGR025W	P53216	100 aa		4.71	□□□□□ -1.66
RGD1	YBR260C	RRT1	P38192	103 aa		4.7	□□□□□ -1.66
RGD1	YBR260C	SHU1	P38751	150 aa		4.7	□□□□□ -1.66
RGD1	YBR260C	RPS14B	P39516	138 aa	Known RBP	4.7	□□□□□ -1.66
RGD1	YBR260C	YER084W	P40057	128 aa		4.7	□□□□□ -1.66
RGD1	YBR260C	ERI1	P62651	68 aa	Known RBP	4.7	□□□□□ -1.66
RGD1	YBR260C	CTR2	P38865	189 aa		4.7	□□□□□ -1.66
RGD1	YBR260C	PBP4	Q07362	185 aa	Known RBP	4.7	□□□□□ -1.66
RGD1	YBR260C	YOL160W	Q08321	113 aa		4.7	□□□□□ -1.66
RGD1	YBR260C	CCW14	O13547	238 aa		4.69	□□□□□ -1.66
RGD1	YBR260C	YJR146W	P47174	117 aa		4.69	□□□□□ -1.66
RGD1	YBR260C	RPL16A	P26784	199 aa	Known RBP	4.68	□□□□□ -1.66
RGD1	YBR260C	PEX17	P40155	199 aa		4.68	□□□□□ -1.66
RGD1	YBR260C	ICY1	Q04329	127 aa		4.68	□□□□□ -1.66
RGD1	YBR260C	ATP20	Q12233	115 aa		4.68	□□□□□ -1.66

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