RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W YDR366CP87287 132 aa2.57□□□□□ -2
NUP60YAR002W CWC27Q02770 301 aa2.57□□□□□ -2
NUP60YAR002W MRPS8Q03799 155 aa2.57□□□□□ -2
NUP60YAR002W DGA1Q08650 418 aa2.57□□□□□ -2
NUP60YAR002W Q0255P03881 472 aa2.56□□□□□ -2
NUP60YAR002W AIM34Q03673 198 aa2.56□□□□□ -2
NUP60YAR002W YLR363W-AQ3E747 85 aa2.56□□□□□ -2
NUP60YAR002W COA3Q3E7B2 85 aa2.56□□□□□ -2
NUP60YAR002W YHR212W-AP0CX91 67 aa2.55□□□□□ -2
NUP60YAR002W YKL070WP36087 169 aa2.55□□□□□ -2
NUP60YAR002W DCV1P43595 202 aa2.55□□□□□ -2
NUP60YAR002W YFR035CP43608 114 aa2.55□□□□□ -2
NUP60YAR002W YDL186WP48568 277 aa2.55□□□□□ -2
NUP60YAR002W ALG13P53178 202 aa2.55□□□□□ -2
NUP60YAR002W YOR008C-AQ3E7B9 74 aa2.55□□□□□ -2
NUP60YAR002W YCL042WP25572 119 aa2.54□□□□□ -2
NUP60YAR002W MRP49P32388 137 aa2.54□□□□□ -2
NUP60YAR002W PRY2P36110 329 aa2.54□□□□□ -2
NUP60YAR002W MPC2P38857 129 aa2.54□□□□□ -2
NUP60YAR002W YPL073CP40323 161 aa2.54□□□□□ -2
NUP60YAR002W YML079WQ03629 201 aa2.54□□□□□ -2
NUP60YAR002W YLR042CQ07990 161 aa2.54□□□□□ -2
NUP60YAR002W DFM1Q12743 341 aaKnown RBP2.54□□□□□ -2
NUP60YAR002W YPR170W-BP0C5R9 85 aa2.53□□□□□ -2
NUP60YAR002W RPL2AP0CX45 254 aaKnown RBP2.53□□□□□ -2
NUP60YAR002W RPL2BP0CX46 254 aaKnown RBP2.53□□□□□ -2
NUP60YAR002W ECM33P38248 429 aaKnown RBP2.53□□□□□ -2
NUP60YAR002W RRT13P40042 185 aa2.53□□□□□ -2
NUP60YAR002W YCH1P42937 148 aa2.53□□□□□ -2
NUP60YAR002W YPL261CQ08976 102 aa2.53□□□□□ -2
NUP60YAR002W MBF1O14467 151 aaKnown RBP2.53□□□□□ -2
NUP60YAR002W YDL022C-AP0C5L6 82 aa2.53□□□□□ -2
NUP60YAR002W RPS11AP0CX47 156 aaKnown RBP2.53□□□□□ -2
NUP60YAR002W RPS11BP0CX48 156 aaKnown RBP2.53□□□□□ -2
NUP60YAR002W RPL16AP26784 199 aaKnown RBP2.53□□□□□ -2
NUP60YAR002W RPF1P38805 295 aaKnown RBP2.53□□□□□ -2
NUP60YAR002W VHS2P40463 436 aa2.53□□□□□ -2
NUP60YAR002W YJR146WP47174 117 aa2.53□□□□□ -2
NUP60YAR002W AIM11P87275 137 aa2.53□□□□□ -2
NUP60YAR002W MSA1Q08471 629 aa2.53□□□□□ -2
NUP60YAR002W YKR041WP36134 250 aa2.52□□□□□ -2.01
NUP60YAR002W YEL067CP39978 195 aa2.52□□□□□ -2.01
NUP60YAR002W YGR035W-AQ45U48 73 aa2.52□□□□□ -2.01
NUP60YAR002W ADH2P00331 348 aaKnown RBP2.51□□□□□ -2.01
NUP60YAR002W TRP1P00912 224 aa2.51□□□□□ -2.01
NUP60YAR002W RPS8AP0CX39 200 aaKnown RBP2.51□□□□□ -2.01
NUP60YAR002W RPS8BP0CX40 200 aaKnown RBP2.51□□□□□ -2.01
NUP60YAR002W ATP15P21306 62 aa2.51□□□□□ -2.01
NUP60YAR002W YNR077CP53758 84 aa2.51□□□□□ -2.01
NUP60YAR002W YDR274CP87283 123 aa2.51□□□□□ -2.01
NUP60YAR002W ELC1Q03071 99 aa2.51□□□□□ -2.01
NUP60YAR002W YKL023C-AQ2V2P3 75 aa2.51□□□□□ -2.01
NUP60YAR002W YBR209WP38311 105 aa2.5□□□□□ -2.01
NUP60YAR002W OXA1P39952 402 aa2.5□□□□□ -2.01
NUP60YAR002W YNL217WP40152 326 aa2.5□□□□□ -2.01
NUP60YAR002W AGE2P40529 298 aa2.5□□□□□ -2.01
NUP60YAR002W YPS5P53057 165 aa2.5□□□□□ -2.01
NUP60YAR002W YLR296WQ05898 108 aa2.5□□□□□ -2.01
NUP60YAR002W YIL102C-AQ2V2P5 75 aa2.5□□□□□ -2.01
NUP60YAR002W IGO2Q9P305 131 aa2.5□□□□□ -2.01
NUP60YAR002W PAI3P01094 68 aa2.5□□□□□ -2.01
NUP60YAR002W UBC5P15732 148 aa2.5□□□□□ -2.01
NUP60YAR002W AIM29P36154 155 aa2.5□□□□□ -2.01
NUP60YAR002W KRE9P39005 276 aa2.5□□□□□ -2.01
NUP60YAR002W VTC1P40046 129 aaRIP-Chip data2.5□□□□□ -2.01not detected
NUP60YAR002W YNL198CP40166 100 aa2.5□□□□□ -2.01
NUP60YAR002W YGL088WP53151 121 aa2.5□□□□□ -2.01
NUP60YAR002W PMP3P87284 55 aa2.5□□□□□ -2.01
NUP60YAR002W YLR194CQ05777 254 aa2.5□□□□□ -2.01
NUP60YAR002W YOR097CQ12274 175 aaPredicted RBP2.5□□□□□ -2.01
NUP60YAR002W RPL18AP0CX49 186 aaKnown RBP2.49□□□□□ -2.01
NUP60YAR002W RPL18BP0CX50 186 aaKnown RBP2.49□□□□□ -2.01
NUP60YAR002W YEL008WP40001 126 aa2.49□□□□□ -2.01
NUP60YAR002W YER181CP40097 107 aa2.49□□□□□ -2.01
NUP60YAR002W PEX17P40155 199 aa2.49□□□□□ -2.01
NUP60YAR002W YIL059CP40520 121 aa2.49□□□□□ -2.01
NUP60YAR002W CIN5P40917 295 aa2.49□□□□□ -2.01
NUP60YAR002W YFR057WP43625 151 aa2.49□□□□□ -2.01
NUP60YAR002W COX12Q01519 83 aa2.49□□□□□ -2.01
NUP60YAR002W YCR075W-AQ3E830 75 aa2.49□□□□□ -2.01
NUP60YAR002W YCL021W-AQ96VH3 125 aa2.49□□□□□ -2.01
NUP60YAR002W ANB1P19211 157 aa2.48□□□□□ -2.01
NUP60YAR002W YER085CP40058 173 aa2.48□□□□□ -2.01
NUP60YAR002W SCW10Q04951 389 aa2.48□□□□□ -2.01
NUP60YAR002W RPL28P02406 149 aaKnown RBP2.47□□□□□ -2.01
NUP60YAR002W HYP2P23301 157 aaKnown RBP2.47□□□□□ -2.01
NUP60YAR002W YCR001WP25347 104 aa2.47□□□□□ -2.01
NUP60YAR002W SHU1P38751 150 aa2.47□□□□□ -2.01
NUP60YAR002W ARC15P40518 154 aaRIP-Chip data2.47□□□□□ -2.01not detected
NUP60YAR002W MRPS12P53732 153 aa2.47□□□□□ -2.01
NUP60YAR002W YGR240C-AQ3E786 66 aa2.47□□□□□ -2.01
NUP60YAR002W UGX2P32772 223 aa2.46□□□□□ -2.02
NUP60YAR002W POP7P38291 140 aa2.46□□□□□ -2.02
NUP60YAR002W YAR029WP39549 74 aa2.46□□□□□ -2.02
NUP60YAR002W YNL190WP53872 204 aa2.46□□□□□ -2.02
NUP60YAR002W YMR122W-AQ3E842 84 aa2.46□□□□□ -2.02
NUP60YAR002W QCR8P08525 94 aa2.46□□□□□ -2.02
NUP60YAR002W ERI1P62651 68 aaKnown RBP2.46□□□□□ -2.02
NUP60YAR002W YMR295CQ03559 197 aa2.46□□□□□ -2.02
NUP60YAR002W LSM6Q06406 86 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms