RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C YDL186WP48568 277 aa3.18□□□□□ -1.9
PTA1YAL043C RPL18AP0CX49 186 aaKnown RBP3.18□□□□□ -1.9
PTA1YAL043C RPL18BP0CX50 186 aaKnown RBP3.18□□□□□ -1.9
PTA1YAL043C ANB1P19211 157 aa3.18□□□□□ -1.9
PTA1YAL043C VMA11P32842 164 aa3.18□□□□□ -1.9
PTA1YAL043C MEC1P38111 2368 aa3.18□□□□□ -1.9
PTA1YAL043C RPL28P02406 149 aaKnown RBP3.17□□□□□ -1.9
PTA1YAL043C RPL12AP0CX53 165 aaKnown RBP3.17□□□□□ -1.9
PTA1YAL043C RPL12BP0CX54 165 aa3.17□□□□□ -1.9
PTA1YAL043C YCR007CP25354 239 aa3.17□□□□□ -1.9
PTA1YAL043C YNL190WP53872 204 aa3.17□□□□□ -1.9
PTA1YAL043C PHO85P17157 305 aa3.17□□□□□ -1.9
PTA1YAL043C ATP15P21306 62 aa3.17□□□□□ -1.9
PTA1YAL043C RPL32P38061 130 aaKnown RBP3.17□□□□□ -1.9
PTA1YAL043C YDR042CQ03205 200 aa3.17□□□□□ -1.9
PTA1YAL043C YML122CQ03207 126 aa3.17□□□□□ -1.9
PTA1YAL043C YPR013CQ12145 317 aa3.17□□□□□ -1.9
PTA1YAL043C AGA1P32323 725 aa3.16□□□□□ -1.9
PTA1YAL043C SIM1P40472 476 aa3.16□□□□□ -1.9
PTA1YAL043C POR2P40478 281 aa3.16□□□□□ -1.9
PTA1YAL043C YML079WQ03629 201 aa3.16□□□□□ -1.9
PTA1YAL043C FCF1Q05498 189 aaPredicted RBP3.16□□□□□ -1.9
PTA1YAL043C MRPL20P22354 195 aaPredicted RBP3.16□□□□□ -1.9
PTA1YAL043C TOS8P53147 276 aa3.16□□□□□ -1.9
PTA1YAL043C YGR219WP53307 113 aa3.16□□□□□ -1.9
PTA1YAL043C AIM11P87275 137 aa3.16□□□□□ -1.9
PTA1YAL043C YIL102C-AQ2V2P5 75 aa3.16□□□□□ -1.9
PTA1YAL043C YLR342W-AQ3E810 57 aa3.16□□□□□ -1.9
PTA1YAL043C INO4P13902 151 aa3.15□□□□□ -1.9
PTA1YAL043C COX10P21592 462 aa3.15□□□□□ -1.9
PTA1YAL043C ECM33P38248 429 aaKnown RBP3.15□□□□□ -1.9
PTA1YAL043C YIR020CP40575 100 aa3.15□□□□□ -1.9
PTA1YAL043C YNR077CP53758 84 aa3.15□□□□□ -1.9
PTA1YAL043C PRM3Q08931 133 aa3.15□□□□□ -1.9
PTA1YAL043C YBL112CQ3E7Y4 105 aa3.15□□□□□ -1.9
PTA1YAL043C SBH1P52870 82 aa3.15□□□□□ -1.91
PTA1YAL043C YPL278CQ08990 100 aa3.15□□□□□ -1.91
PTA1YAL043C YLR112WQ12130 139 aa3.15□□□□□ -1.91
PTA1YAL043C YER135CP40082 130 aa3.14□□□□□ -1.91
PTA1YAL043C YFL065CP43539 102 aa3.14□□□□□ -1.91
PTA1YAL043C YFR035CP43608 114 aa3.14□□□□□ -1.91
PTA1YAL043C KEG1P43614 200 aa3.14□□□□□ -1.91
PTA1YAL043C COF1Q03048 143 aaKnown RBP3.14□□□□□ -1.91
PTA1YAL043C YPR203WQ08994 102 aa3.14□□□□□ -1.91
PTA1YAL043C COA3Q3E7B2 85 aa3.14□□□□□ -1.91
PTA1YAL043C YPL229WQ99395 206 aa3.14□□□□□ -1.91
PTA1YAL043C Q0255P03881 472 aa3.14□□□□□ -1.91
PTA1YAL043C RPL2AP0CX45 254 aaKnown RBP3.14□□□□□ -1.91
PTA1YAL043C RPL2BP0CX46 254 aaKnown RBP3.14□□□□□ -1.91
PTA1YAL043C YCR041WP37265 110 aa3.14□□□□□ -1.91
PTA1YAL043C DSE2P38844 325 aa3.14□□□□□ -1.91
PTA1YAL043C TOR1P35169 2470 aa3.13□□□□□ -1.91
PTA1YAL043C RPL15AP05748 204 aaKnown RBP3.13□□□□□ -1.91
PTA1YAL043C RPL16BP26785 198 aaKnown RBP3.13□□□□□ -1.91
PTA1YAL043C YKL044WP36092 106 aa3.13□□□□□ -1.91
PTA1YAL043C PEX22P39718 180 aa3.13□□□□□ -1.91
PTA1YAL043C YER181CP40097 107 aa3.13□□□□□ -1.91
PTA1YAL043C YIL059CP40520 121 aa3.13□□□□□ -1.91
PTA1YAL043C PFY1P07274 126 aa3.12□□□□□ -1.91
PTA1YAL043C NHP2P32495 156 aaPredicted RBP3.12□□□□□ -1.91
PTA1YAL043C YHR022CP38763 256 aa3.12□□□□□ -1.91
PTA1YAL043C DCV1P43595 202 aa3.12□□□□□ -1.91
PTA1YAL043C MGR2Q02889 113 aa3.12□□□□□ -1.91
PTA1YAL043C YLR042CQ07990 161 aa3.12□□□□□ -1.91
PTA1YAL043C YOR008C-AQ3E7B9 74 aa3.12□□□□□ -1.91
PTA1YAL043C SFT1P43682 97 aa3.12□□□□□ -1.91
PTA1YAL043C OST2P46964 130 aa3.12□□□□□ -1.91
PTA1YAL043C RPL16AP26784 199 aaKnown RBP3.11□□□□□ -1.91
PTA1YAL043C YLR412C-AQ3E742 68 aa3.11□□□□□ -1.91
PTA1YAL043C YBR200W-AQ3E755 54 aa3.11□□□□□ -1.91
PTA1YAL043C IGO2Q9P305 131 aa3.11□□□□□ -1.91
PTA1YAL043C ATX1P38636 73 aa3.11□□□□□ -1.91
PTA1YAL043C PBI2P0CT04 75 aaKnown RBP3.1□□□□□ -1.91
PTA1YAL043C MIG3P39943 394 aa3.1□□□□□ -1.91
PTA1YAL043C VPS55P47111 140 aa3.1□□□□□ -1.91
PTA1YAL043C YMR317WQ04893 1140 aa3.1□□□□□ -1.91
PTA1YAL043C SRL1Q08673 210 aa3.1□□□□□ -1.91
PTA1YAL043C YOR097CQ12274 175 aaPredicted RBP3.1□□□□□ -1.91
PTA1YAL043C YNL277W-AQ3E7Z0 62 aa3.1□□□□□ -1.91
PTA1YAL043C KTI11Q3E840 82 aa3.1□□□□□ -1.91
PTA1YAL043C YOR034C-AQ3E735 80 aa3.1□□□□□ -1.91
PTA1YAL043C TAR1Q8TGM6 124 aa3.1□□□□□ -1.91
PTA1YAL043C TOS6P48560 102 aa3.09□□□□□ -1.91
PTA1YAL043C YLR194CQ05777 254 aa3.09□□□□□ -1.91
PTA1YAL043C RPL42AP0CX27 106 aaKnown RBP3.09□□□□□ -1.92
PTA1YAL043C RPL42BP0CX28 106 aaKnown RBP3.09□□□□□ -1.92
PTA1YAL043C URM1P40554 99 aaPredicted RBP3.09□□□□□ -1.92
PTA1YAL043C HPA2Q06592 156 aa3.09□□□□□ -1.92
PTA1YAL043C YDR029WQ12111 104 aa3.09□□□□□ -1.92
PTA1YAL043C YCL021W-AQ96VH3 125 aa3.09□□□□□ -1.92
PTA1YAL043C RAD6P06104 172 aa3.08□□□□□ -1.92
PTA1YAL043C RPS8AP0CX39 200 aaKnown RBP3.08□□□□□ -1.92
PTA1YAL043C RPS8BP0CX40 200 aaKnown RBP3.08□□□□□ -1.92
PTA1YAL043C RPA12P32529 125 aaKnown RBP3.08□□□□□ -1.92
PTA1YAL043C CWP2P43497 92 aa3.08□□□□□ -1.92
PTA1YAL043C HOR7Q05827 59 aa3.08□□□□□ -1.92
PTA1YAL043C YGR039WP53225 103 aa3.08□□□□□ -1.92
PTA1YAL043C YLR296WQ05898 108 aa3.08□□□□□ -1.92
PTA1YAL043C LSM6Q06406 86 aaKnown RBP3.08□□□□□ -1.92
PTA1YAL043C Q0297Q9ZZV8 51 aa3.08□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 106.5 ms