RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C YCR024C-BQ3E7Z8 88 aa9.99□□□□□ -0.81
SSA1YAL005C TY1A-HP0C2I4 478 aaKnown RBP9.98□□□□□ -0.81
SSA1YAL005C PBI2P0CT04 75 aaKnown RBP9.98□□□□□ -0.81
SSA1YAL005C YBR200W-AQ3E755 54 aa9.98□□□□□ -0.81
SSA1YAL005C Q0255P03881 472 aa9.97□□□□□ -0.81
SSA1YAL005C AUA1P32450 94 aa9.97□□□□□ -0.81
SSA1YAL005C ZRT1P32804 376 aa9.97□□□□□ -0.81
SSA1YAL005C RPL23AP0CX41 137 aaKnown RBP9.96□□□□□ -0.81
SSA1YAL005C RPL23BP0CX42 137 aaKnown RBP9.96□□□□□ -0.81
SSA1YAL005C TOA2P32774 122 aa9.96□□□□□ -0.81
SSA1YAL005C YHR140WP38842 239 aa9.96□□□□□ -0.81
SSA1YAL005C PEX22P39718 180 aa9.96□□□□□ -0.81
SSA1YAL005C GPI19Q04082 140 aa9.96□□□□□ -0.81
SSA1YAL005C ATP5P09457 212 aa9.95□□□□□ -0.82
SSA1YAL005C RPL16BP26785 198 aaKnown RBP9.95□□□□□ -0.82
SSA1YAL005C YGL230CP53074 147 aa9.95□□□□□ -0.82
SSA1YAL005C YDL085C-AQ3E7B7 68 aaKnown RBP9.95□□□□□ -0.82
SSA1YAL005C SEN15Q04675 128 aa9.95□□□□□ -0.82
SSA1YAL005C IGO2Q9P305 131 aa9.95□□□□□ -0.82
SSA1YAL005C SEC4P07560 215 aaKnown RBP9.94□□□□□ -0.82
SSA1YAL005C HYP2P23301 157 aaKnown RBP9.94□□□□□ -0.82
SSA1YAL005C CYT2Q00873 224 aa9.94□□□□□ -0.82
SSA1YAL005C YPR053CQ6Q5F3 151 aa9.94□□□□□ -0.82
SSA1YAL005C RPS22BQ3E7Y3 130 aaKnown RBP9.94□□□□□ -0.82
SSA1YAL005C YLR415CO13578 112 aa9.93□□□□□ -0.82
SSA1YAL005C RRT13P40042 185 aa9.93□□□□□ -0.82
SSA1YAL005C BRP1P53194 125 aa9.93□□□□□ -0.82
SSA1YAL005C HAP3P13434 144 aa9.92□□□□□ -0.82
SSA1YAL005C OST2P46964 130 aa9.92□□□□□ -0.82
SSA1YAL005C UBC5P15732 148 aa9.91□□□□□ -0.82
SSA1YAL005C RDS3Q06835 107 aaPredicted RBP9.91□□□□□ -0.82
SSA1YAL005C YCR001WP25347 104 aa9.9□□□□□ -0.82
SSA1YAL005C YKR032WP36127 104 aa9.9□□□□□ -0.82
SSA1YAL005C YRA2P36036 203 aaKnown RBP RIP-Chip data9.9□□□□□ -0.83not detected
SSA1YAL005C ANB1P19211 157 aa9.89□□□□□ -0.83
SSA1YAL005C YCR007CP25354 239 aa9.89□□□□□ -0.83
SSA1YAL005C SBH1P52870 82 aa9.89□□□□□ -0.83
SSA1YAL005C SCW10Q04951 389 aa9.89□□□□□ -0.83
SSA1YAL005C PET8P38921 284 aa9.88□□□□□ -0.83
SSA1YAL005C YLR042CQ07990 161 aa9.88□□□□□ -0.83
SSA1YAL005C YGR039WP53225 103 aa9.86□□□□□ -0.83
SSA1YAL005C YKR070WP36151 352 aaKnown RBP9.85□□□□□ -0.83
SSA1YAL005C SFT1P43682 97 aa9.85□□□□□ -0.83
SSA1YAL005C YPS5P53057 165 aa9.85□□□□□ -0.83
SSA1YAL005C KTI11Q3E840 82 aa9.85□□□□□ -0.83
SSA1YAL005C VAM10Q08474 114 aa9.84□□□□□ -0.83
SSA1YAL005C YNL277W-AQ3E7Z0 62 aa9.84□□□□□ -0.83
SSA1YAL005C YNL200CP40165 246 aaKnown RBP9.82□□□□□ -0.84
SSA1YAL005C YPR170W-BP0C5R9 85 aa9.81□□□□□ -0.84
SSA1YAL005C FCF1Q05498 189 aaPredicted RBP9.81□□□□□ -0.84
SSA1YAL005C YBL112CQ3E7Y4 105 aa9.81□□□□□ -0.84
SSA1YAL005C YPL073CP40323 161 aa9.8□□□□□ -0.84
SSA1YAL005C YIL059CP40520 121 aa9.8□□□□□ -0.84
SSA1YAL005C COX10P21592 462 aa9.79□□□□□ -0.84
SSA1YAL005C YNL217WP40152 326 aa9.79□□□□□ -0.84
SSA1YAL005C YIL014C-AQ02598 104 aa9.79□□□□□ -0.84
SSA1YAL005C SGF11Q03067 99 aa9.79□□□□□ -0.84
SSA1YAL005C YLR412C-AQ3E742 68 aa9.79□□□□□ -0.84
SSA1YAL005C RPL42AP0CX27 106 aaKnown RBP9.78□□□□□ -0.84
SSA1YAL005C RPL42BP0CX28 106 aaKnown RBP9.78□□□□□ -0.84
SSA1YAL005C YER134CP40081 178 aa9.78□□□□□ -0.84
SSA1YAL005C KRE9P39005 276 aa9.78□□□□□ -0.84
SSA1YAL005C TEM1P38987 245 aa9.77□□□□□ -0.85
SSA1YAL005C YGL118CP53132 145 aa9.77□□□□□ -0.85
SSA1YAL005C ATP23P53722 227 aa9.77□□□□□ -0.85
SSA1YAL005C CUE4Q04201 117 aaPredicted RBP9.77□□□□□ -0.85
SSA1YAL005C HAL1Q01766 294 aa9.76□□□□□ -0.85
SSA1YAL005C ADH1P00330 348 aaKnown RBP9.76□□□□□ -0.85
SSA1YAL005C DGA1Q08650 418 aa9.76□□□□□ -0.85
SSA1YAL005C SHH4Q06236 168 aa9.75□□□□□ -0.85
SSA1YAL005C MGR2Q02889 113 aa9.74□□□□□ -0.85
SSA1YAL005C COA6Q3E846 104 aa9.74□□□□□ -0.85
SSA1YAL005C DCV1P43595 202 aa9.74□□□□□ -0.85
SSA1YAL005C BET5Q03630 159 aa9.73□□□□□ -0.85
SSA1YAL005C YGR240C-AQ3E786 66 aa9.73□□□□□ -0.85
SSA1YAL005C PFY1P07274 126 aa9.72□□□□□ -0.85
SSA1YAL005C INO4P13902 151 aa9.72□□□□□ -0.85
SSA1YAL005C PAI3P01094 68 aa9.72□□□□□ -0.85
SSA1YAL005C YJL028WP47062 111 aa9.71□□□□□ -0.86
SSA1YAL005C RAD6P06104 172 aa9.7□□□□□ -0.86
SSA1YAL005C AQY1P0CD91 305 aa9.7□□□□□ -0.86
SSA1YAL005C YIL134C-AQ45U18 67 aa9.7□□□□□ -0.86
SSA1YAL005C YMR103CQ04436 120 aa9.69□□□□□ -0.86
SSA1YAL005C YIA6P40556 373 aa9.68□□□□□ -0.86
SSA1YAL005C RPS8AP0CX39 200 aaKnown RBP9.68□□□□□ -0.86
SSA1YAL005C RPS8BP0CX40 200 aaKnown RBP9.68□□□□□ -0.86
SSA1YAL005C RPL32P38061 130 aaKnown RBP9.66□□□□□ -0.86
SSA1YAL005C CRC1Q12289 327 aa9.66□□□□□ -0.86
SSA1YAL005C YBL081WP38180 368 aaKnown RBP9.66□□□□□ -0.86
SSA1YAL005C POP3P53833 195 aaPredicted RBP9.66□□□□□ -0.86
SSA1YAL005C PMP3P87284 55 aa9.66□□□□□ -0.86
SSA1YAL005C MRPL11P36521 249 aaPredicted RBP9.65□□□□□ -0.86
SSA1YAL005C YFL065CP43539 102 aa9.65□□□□□ -0.86
SSA1YAL005C TOS6P48560 102 aa9.65□□□□□ -0.86
SSA1YAL005C YPR203WQ08994 102 aa9.65□□□□□ -0.86
SSA1YAL005C RPL16AP26784 199 aaKnown RBP9.64□□□□□ -0.87
SSA1YAL005C YDR042CQ03205 200 aa9.64□□□□□ -0.87
SSA1YAL005C YJR146WP47174 117 aa9.62□□□□□ -0.87
SSA1YAL005C YDR029WQ12111 104 aa9.62□□□□□ -0.87
SSA1YAL005C HTL1Q9URQ5 78 aa9.62□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms