RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 UNC13DQ70J99 1090 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 SYT13Q7L8C5 426 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 MON1AQ86VX9 555 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 CD302Q8IX05 232 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 THEM5Q8N1Q8 247 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 CAMKK1Q8N5S9 505 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 C2orf15Q8WU43 125 aaKnown RBP10.74□□□□□ -0.69
PHGDH-222ENST00000641587 MRPS31Q92665 395 aaKnown RBP10.74□□□□□ -0.69
PHGDH-222ENST00000641587 CD101Q93033 1021 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 GSDMAQ96QA5 445 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 TSPY26PQ9H489 355 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 ANO10Q9NW15 660 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 AGO2Q9UKV8 859 aaKnown RBP10.74□□□□□ -0.69
PHGDH-222ENST00000641587 ZMIZ1Q9ULJ6 1067 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 L1RE1Q9UN81 338 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 WASF3Q9UPY6 502 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 DERAQ9Y315 318 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 C2CD2Q9Y426 696 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 FAM208BQ5VWN6 2430 aa10.74□□□□□ -0.69
PHGDH-222ENST00000641587 ASCC3Q8N3C0 2202 aaKnown RBP10.73□□□□□ -0.69
PHGDH-222ENST00000641587 KPNA7A9QM74 516 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 CSH1P0DML2 217 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 CSH2P0DML3 217 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 CYP2F1P24903 491 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 DDX6P26196 483 aaKnown RBP eCLIP10.73□□□□□ -0.69
PHGDH-222ENST00000641587 POLR2BP30876 1174 aaKnown RBP10.73□□□□□ -0.69
PHGDH-222ENST00000641587 IFNAR2P48551 515 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 SEC13P55735 322 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 ZNF445P59923 1031 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 GTF2BQ00403 316 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 PDGFRLQ15198 375 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 EML3Q32P44 896 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 L1TD1Q5T7N2 865 aaKnown RBP10.73□□□□□ -0.69
PHGDH-222ENST00000641587 SH3PXD2AQ5TCZ1 1133 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 CNNM4Q6P4Q7 775 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 LRSAM1Q6UWE0 723 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 OSTM1Q86WC4 334 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 SFTPA1Q8IWL2 248 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 DCP1BQ8IZD4 617 aaKnown RBP10.73□□□□□ -0.69
PHGDH-222ENST00000641587 PDCL2Q8N4E4 241 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 CPA6Q8N4T0 437 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 TRIML1Q8N9V2 468 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 DNAJC19Q96DA6 116 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 TSPAN18Q96SJ8 248 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 TMEM121BQ9BXQ6 578 aaPredicted RBP10.73□□□□□ -0.69
PHGDH-222ENST00000641587 LINC00597Q9H2U6 94 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 ASB7Q9H672 318 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 DUS2Q9NX74 493 aaKnown RBP10.73□□□□□ -0.69
PHGDH-222ENST00000641587 TBC1D7Q9P0N9 293 aa10.73□□□□□ -0.69
PHGDH-222ENST00000641587 PVALEFA0A1B0GWK0 134 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 C2orf78A6NCI8 922 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 CDX4O14627 284 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-222ENST00000641587 SCAMP3O14828 347 aaKnown RBP10.72□□□□□ -0.69
PHGDH-222ENST00000641587 KLRC4O43908 158 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 NOL4O94818 638 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 RHOBTB1O94844 696 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 ITGB3P05106 788 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 CKMP06732 381 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 HNRNPLP14866 589 aaKnown RBP eCLIP10.72□□□□□ -0.69
PHGDH-222ENST00000641587 GAP43P17677 238 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 PAX3P23760 479 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 ADSSP30520 456 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 ZXDBP98169 803 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 TSPY1Q01534 308 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 KCNA1Q09470 495 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 SMARCB1Q12824 385 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 COL9A2Q14055 689 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-222ENST00000641587 ZNF268Q14587 947 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-222ENST00000641587 KCNB1Q14721 858 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 SV2CQ496J9 727 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 FBXO43Q4G163 708 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 ANO6Q4KMQ2 910 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 FAM26FQ5R3K3 315 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 PMS2CLQ68D20 193 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 ANO7Q6IWH7 933 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 KIAA1211LQ6NV74 962 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 SFR1Q86XK3 245 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 SMYD4Q8IYR2 804 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-222ENST00000641587 ARL14EPQ8N8R7 260 aaPredicted RBP10.72□□□□□ -0.69
PHGDH-222ENST00000641587 MDGA1Q8NFP4 955 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 TSTD1Q8NFU3 115 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 SPATA20Q8TB22 786 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 SH3RF2Q8TEC5 729 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 OSCP1Q8WVF1 389 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 HPS3Q969F9 1004 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 ACDQ96AP0 544 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 SAAL1Q96ER3 474 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 PKMYT1Q99640 499 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 DDX43Q9NXZ2 648 aaKnown RBP10.72□□□□□ -0.69
PHGDH-222ENST00000641587 EBF1Q9UH73 591 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 DACH1Q9UI36 760 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 ZMYM5Q9UJ78 669 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 GTF3C4Q9UKN8 822 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 BAHCC1Q9P281 2608 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 AKAP13Q12802 2813 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 TNRC6BQ9UPQ9 1833 aaKnown RBP10.72□□□□□ -0.69
PHGDH-222ENST00000641587 MYOFQ9NZM1 2061 aa10.72□□□□□ -0.69
PHGDH-222ENST00000641587 TRAV19A0A0A6YYK7 116 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 RHOBTB3O94955 611 aa10.71□□□□□ -0.69
PHGDH-222ENST00000641587 OPRD1P41143 372 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms