RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 DDX43Q9NXZ2 648 aaKnown RBP17.28■□□□□ 0.36
PHGDH-216ENST00000641375 C2CD4BA6NLJ0 364 aa17.27■□□□□ 0.36
PHGDH-216ENST00000641375 PIK3R2O00459 728 aa17.27■□□□□ 0.36
PHGDH-216ENST00000641375 PCK1P35558 622 aa17.27■□□□□ 0.36
PHGDH-216ENST00000641375 SCNN1AP37088 669 aa17.27■□□□□ 0.36
PHGDH-216ENST00000641375 DRG2P55039 364 aaKnown RBP17.27■□□□□ 0.36
PHGDH-216ENST00000641375 BFSP2Q13515 415 aa17.27■□□□□ 0.36
PHGDH-216ENST00000641375 MBTPS1Q14703 1052 aa17.27■□□□□ 0.36
PHGDH-216ENST00000641375 C3orf58Q8NDZ4 430 aa17.27■□□□□ 0.36
PHGDH-216ENST00000641375 SLCO2A1Q92959 643 aa17.27■□□□□ 0.36
PHGDH-216ENST00000641375 RNF25Q96BH1 459 aaPredicted RBP17.27■□□□□ 0.36
PHGDH-216ENST00000641375 GDAP1L1Q96MZ0 367 aa17.27■□□□□ 0.36
PHGDH-216ENST00000641375 LPIN3Q9BQK8 851 aa17.27■□□□□ 0.36
PHGDH-216ENST00000641375 UNC93B1Q9H1C4 597 aa17.27■□□□□ 0.36
PHGDH-216ENST00000641375 CACNG4Q9UBN1 327 aa17.27■□□□□ 0.36
PHGDH-216ENST00000641375 C9IYK1 514 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 TJP3O95049 919 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 ODC1P11926 461 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 SELPP16109 830 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 PDGFRAP16234 1089 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 IBSPP21815 317 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-216ENST00000641375 GBP1P32455 592 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 PTGIRP43119 386 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 LLGL1Q15334 1064 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 TRADDQ15628 312 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 ATP13A4Q4VNC1 1196 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 TFDP3Q5H9I0 405 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 TTC27Q6P3X3 843 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 FAM43BQ6ZT52 329 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-216ENST00000641375 LRRC8DQ7L1W4 858 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 SCUBE3Q8IX30 993 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 GRK7Q8WTQ7 553 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 NCAPGQ9BPX3 1015 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 HEMGNQ9BXL5 484 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 DUSP16Q9BY84 665 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 PAK6Q9NQU5 681 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-216ENST00000641375 INPP5FQ9Y2H2 1132 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 XPO1O14980 1071 aaKnown RBP17.26■□□□□ 0.35
PHGDH-216ENST00000641375 PAPSS1O43252 624 aaPredicted RBP17.26■□□□□ 0.35
PHGDH-216ENST00000641375 DAPK3O43293 454 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 B3GAT3O94766 335 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 ECEL1O95672 775 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 DUPD1Q68J44 220 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 GLB1LQ6UWU2 654 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 ARCQ7LC44 396 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 ARFGAP1Q8N6T3 406 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 RXFP2Q8WXD0 754 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 TRIM51Q9BSJ1 452 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 HPCAL4Q9UM19 191 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 PTPN22Q9Y2R2 807 aa17.26■□□□□ 0.35
PHGDH-216ENST00000641375 ARHGEF37A1IGU5 675 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 CHRM1P11229 460 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-216ENST00000641375 PCSK1P29120 753 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 PLCB3Q01970 1234 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 CCNG2Q16589 344 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 MFSD7Q6UXD7 560 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 SPOCD1Q6ZMY3 1216 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 FAM126BQ8IXS8 530 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 FUKQ8N0W3 1084 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 C1orf54Q8WWF1 131 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 PIWIL1Q96J94 861 aaKnown RBP17.25■□□□□ 0.35
PHGDH-216ENST00000641375 PAAF1Q9BRP4 392 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 DCLK3Q9C098 648 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 KLHL11Q9NVR0 708 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 DSEQ9UL01 958 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 CDH9Q9ULB4 789 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 USP18Q9UMW8 372 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 EFR3BQ9Y2G0 817 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 LRRD1A4D1F6 860 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 DPYSL4O14531 572 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 NPR3P17342 541 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 IGFBP6P24592 240 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-216ENST00000641375 ACAT1P24752 427 aaKnown RBP17.25■□□□□ 0.35
PHGDH-216ENST00000641375 ECHS1P30084 290 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 FLT3P36888 993 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 FAM189BP81408 668 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 TIGD5Q53EQ6 642 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 TXNRD3NBQ6F5E7 133 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 SYDE1Q6ZW31 735 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-216ENST00000641375 SLC26A9Q7LBE3 791 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 RTN4RL1Q86UN2 441 aaPredicted RBP17.25■□□□□ 0.35
PHGDH-216ENST00000641375 METTL23Q86XA0 190 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 MREGQ8N565 214 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 SYT15Q9BQS2 421 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 HERPUD2Q9BSE4 406 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 ZWILCHQ9H900 591 aa17.25■□□□□ 0.35
PHGDH-216ENST00000641375 PI4K2BG5E9Z4 385 aa17.24■□□□□ 0.35
PHGDH-216ENST00000641375 ATP2C2O75185 946 aa17.24■□□□□ 0.35
PHGDH-216ENST00000641375 TKTP29401 623 aaKnown RBP17.24■□□□□ 0.35
PHGDH-216ENST00000641375 MIPP30301 263 aa17.24■□□□□ 0.35
PHGDH-216ENST00000641375 SDC4P31431 198 aa17.24■□□□□ 0.35
PHGDH-216ENST00000641375 MDH1BQ5I0G3 518 aa17.24■□□□□ 0.35
PHGDH-216ENST00000641375 DCLRE1AQ6PJP8 1040 aa17.24■□□□□ 0.35
PHGDH-216ENST00000641375 DDX42Q86XP3 938 aaKnown RBP eCLIP17.24■□□□□ 0.353e-6■■■□□ 16.1
PHGDH-216ENST00000641375 ATL2Q8NHH9 583 aa17.24■□□□□ 0.35
PHGDH-216ENST00000641375 RAPGEF5Q92565 580 aa17.24■□□□□ 0.35
PHGDH-216ENST00000641375 UBXN6Q9BZV1 441 aa17.24■□□□□ 0.35
PHGDH-216ENST00000641375 DPH5Q9H2P9 285 aa17.24■□□□□ 0.35
PHGDH-216ENST00000641375 hCG_1818297A0A087WSY0 165 aa17.23■□□□□ 0.35
PHGDH-216ENST00000641375 PITPNM1O00562 1244 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms