RNA–Protein interactions for RNA: ENST00000640853.1

LPP-222, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-222ENST00000640853 SAGE2PA6NJ88 616 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 FCGR1AP12314 374 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 PRAMEP78395 509 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 PLOD1Q02809 727 aaPredicted RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 PTK6Q13882 451 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 MFSD14CQ5VZR4 134 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 C4orf33Q8N1A6 199 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 KYQ8NBH2 561 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 STK32AQ8WU08 396 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 ZNF75CPQ92670 426 aaPredicted RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 TNIP3Q96KP6 325 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 ECSITQ9BQ95 431 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 RIPK2O43353 540 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 HOXA2O43364 376 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 HBP1O60381 514 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 PCSK1P29120 753 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 TFDP3Q5H9I0 405 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 ADCK1Q86TW2 530 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 PPHLN1Q8NEY8 458 aaKnown RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 GTF3C2Q8WUA4 911 aaPredicted RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 DCUN1D1Q96GG9 259 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 PI4K2AQ9BTU6 479 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 C15orf41Q9Y2V0 281 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 ANKARQ7Z5J8 1434 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 RRN3P2A6NIE6 340 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 M0R3G1 203 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 EPHB6O15197 1021 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 SHBGP04278 402 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 SPP2Q13103 211 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 USP10Q14694 798 aaKnown RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 SNRNP48Q6IEG0 339 aaKnown RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 FAM160A2Q8N612 972 aaPredicted RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 SPIRE2Q8WWL2 714 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 FAM163AQ96GL9 167 aaPredicted RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 PRPF18Q99633 342 aaKnown RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 DHX35Q9H5Z1 703 aaKnown RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 KCNH7Q9NS40 1196 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 CEMIPQ8WUJ3 1361 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 CPS1P31327 1500 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 GAS2O43903 313 aaKnown RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 SERPINB8P50452 374 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 PPIDQ08752 370 aaKnown RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 LINC00523Q86TU6 105 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 MCOLN2Q8IZK6 566 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 CLEC4FQ8N1N0 589 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 RNF149Q8NC42 400 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 GLMNQ92990 594 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 NIF3L1Q9GZT8 377 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 SPON1Q9HCB6 807 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 KCNK4Q9NYG8 393 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 VPS9D1Q9Y2B5 631 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 LRCH1Q9Y2L9 728 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 SPATA31A6Q5VVP1 1343 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 TARSP26639 723 aaKnown RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 FAPQ12884 760 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 CCDC153Q494R4 210 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 PIGWQ7Z7B1 504 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 CCDC126Q96EE4 140 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 WNK4Q96J92 1243 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 SVILO95425 2214 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 UNC13AQ9UPW8 1703 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 COL15A1P39059 1388 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 ATP6V1G2O95670 118 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 CLPTM1O96005 669 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 TKTP29401 623 aaKnown RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 CYTH1Q15438 398 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 EFHBQ8N7U6 833 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 TBC1D10AQ9BXI6 508 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 DCLK3Q9C098 648 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 TRIM45Q9H8W5 580 aaPredicted RBP3.17□□□□□ -1.9
LPP-222ENST00000640853 LRRC4BQ9NT99 713 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 RNF146Q9NTX7 359 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 AHCTF1Q8WYP5 2266 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 PI4K2BG5E9Z4 385 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 KCNA3P22001 575 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 TMEM119Q4V9L6 283 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 SNX30Q5VWJ9 437 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 UGT3A1Q6NUS8 523 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 FOXR2Q6PJQ5 311 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 CCDC103Q8IW40 242 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 DDIASQ8IXT1 998 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 TRAPPC9Q96Q05 1148 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 NUDT12Q9BQG2 462 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.17□□□□□ -1.9
LPP-222ENST00000640853 GTSE1Q9NYZ3 720 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 PCYOX1Q9UHG3 505 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 AP3M1Q9Y2T2 418 aa3.17□□□□□ -1.9
LPP-222ENST00000640853 CEP250Q9BV73 2442 aa3.16□□□□□ -1.9
LPP-222ENST00000640853 TRIOBPQ9H2D6 2365 aa3.16□□□□□ -1.9
LPP-222ENST00000640853 ATXN2Q99700 1313 aaKnown RBP3.16□□□□□ -1.9
LPP-222ENST00000640853 CCDC195A0A1B0GUA6 201 aa3.16□□□□□ -1.9
LPP-222ENST00000640853 PROSCO94903 275 aa3.16□□□□□ -1.9
LPP-222ENST00000640853 FGFR2P21802 821 aa3.16□□□□□ -1.9
LPP-222ENST00000640853 GRK2P25098 689 aa3.16□□□□□ -1.9
LPP-222ENST00000640853 RRM2P31350 389 aa3.16□□□□□ -1.9
LPP-222ENST00000640853 MCL1Q07820 350 aa3.16□□□□□ -1.9
LPP-222ENST00000640853 TSTA3Q13630 321 aaPredicted RBP3.16□□□□□ -1.9
LPP-222ENST00000640853 IMPG1Q17R60 797 aa3.16□□□□□ -1.9
LPP-222ENST00000640853 CLEC16AQ2KHT3 1053 aa3.16□□□□□ -1.9
LPP-222ENST00000640853 BTBD8Q5XKL5 378 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms