RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 FAM213AQ9BRX8 229 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 RNF38Q9H0F5 515 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 SNX25Q9H3E2 840 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 CAAP1Q9H8G2 361 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 DMTF1Q9Y222 760 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 USP20Q9Y2K6 914 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 GIT1Q9Y2X7 761 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 FAM32AQ9Y421 112 aaKnown RBP5.91□□□□□ -1.46
SCARB2-218ENST00000639715 CSADQ9Y600 493 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 RGPD2P0DJD1 1756 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 COL14A1Q05707 1796 aaKnown RBP5.91□□□□□ -1.46
SCARB2-218ENST00000639715 DDX3XO00571 662 aaKnown RBP eCLIP5.91□□□□□ -1.465e-14■■■■■ 33.6
SCARB2-218ENST00000639715 KPNA4O00629 521 aaPredicted RBP5.91□□□□□ -1.46
SCARB2-218ENST00000639715 CDH16O75309 829 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 CSPG5O95196 566 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 TFPTP0C1Z6 253 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 KRT3P12035 628 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 CASP5P51878 434 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 MARSP56192 900 aaKnown RBP5.91□□□□□ -1.46
SCARB2-218ENST00000639715 YWHAGP61981 247 aaKnown RBP eCLIP5.91□□□□□ -1.46
SCARB2-218ENST00000639715 TRIP13Q15645 432 aaPredicted RBP5.91□□□□□ -1.46
SCARB2-218ENST00000639715 ADRM1Q16186 407 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 SNRNP35Q16560 246 aaKnown RBP5.91□□□□□ -1.46
SCARB2-218ENST00000639715 SUPT20HL1Q3ZLR7 823 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 CEP78Q5JTW2 689 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 HYIQ5T013 277 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 PCNX4Q63HM2 1172 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 STYK1Q6J9G0 422 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 ZNF720Q7Z2F6 126 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 GOLM1Q8NBJ4 401 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 GALNT6Q8NCL4 622 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 RAVER2Q9HCJ3 691 aaKnown RBP5.91□□□□□ -1.46
SCARB2-218ENST00000639715 TMEM8AQ9HCN3 771 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 GINM1Q9NU53 330 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 MKS1Q9NXB0 559 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 PRKAG3Q9UGI9 489 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 ANGPTL3Q9Y5C1 460 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 PAPPAQ13219 1627 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 UMODL1Q5DID0 1318 aa5.91□□□□□ -1.46
SCARB2-218ENST00000639715 ARPC4-TTLL3A0A0A6YYG9 625 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 LINC00854A0A1B0GVQ3 168 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 WTIPA6NIX2 430 aaPredicted RBP5.9□□□□□ -1.46
SCARB2-218ENST00000639715 SNTNA6NMZ2 147 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 H3BRJ5 948 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 H7C0C1 242 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 KLHL41O60662 606 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 DAB1O75553 588 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 MT-ND3P03897 115 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 ENO1P06733 434 aaKnown RBP5.9□□□□□ -1.46
SCARB2-218ENST00000639715 COMTP21964 271 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 VARSP26640 1264 aaKnown RBP5.9□□□□□ -1.46
SCARB2-218ENST00000639715 CHKAP35790 457 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 ATP5OP48047 213 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 EIF2B5Q13144 721 aaKnown RBP5.9□□□□□ -1.46
SCARB2-218ENST00000639715 ARHGEF6Q15052 776 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 LLGL1Q15334 1064 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 OASLQ15646 514 aaKnown RBP5.9□□□□□ -1.46
SCARB2-218ENST00000639715 SPDYCQ5MJ68 293 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 FOXB2Q5VYV0 432 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 BTNL9Q6UXG8 535 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 DSTYKQ6XUX3 929 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 KCNK18Q7Z418 384 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 ECHDC2Q86YB7 292 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 RFX6Q8HWS3 928 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 SLC25A41Q8N5S1 370 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 OR6Y1Q8NGX8 325 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 GABPB2Q8TAK5 448 aaPredicted RBP5.9□□□□□ -1.46
SCARB2-218ENST00000639715 DIS3LQ8TF46 1054 aaKnown RBP5.9□□□□□ -1.46
SCARB2-218ENST00000639715 PYROXD1Q8WU10 500 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 SLC35C1Q96A29 364 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 MAGEB18Q96M61 343 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 MED15Q96RN5 788 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 HAPLN3Q96S86 360 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 ZSWIM1Q9BR11 485 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 PACSIN1Q9BY11 444 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 MRPL46Q9H2W6 279 aaKnown RBP5.9□□□□□ -1.46
SCARB2-218ENST00000639715 NOL6Q9H6R4 1146 aaKnown RBP5.9□□□□□ -1.46
SCARB2-218ENST00000639715 TRIM39Q9HCM9 518 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 SAYSD1Q9NPB0 183 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 PCDH12Q9NPG4 1184 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 RNF146Q9NTX7 359 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 HOXC10Q9NYD6 342 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 FBXO40Q9UH90 709 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 DTNAQ9Y4J8 743 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 PCDHB2Q9Y5E7 798 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 ZHX2Q9Y6X8 837 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 C1orf232A0A0U1RR37 186 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 ZSCAN5BA6NJL1 495 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 TLR3O15455 904 aaKnown RBP5.9□□□□□ -1.46
SCARB2-218ENST00000639715 CLDN3O15551 220 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 SERPINI2O75830 405 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 CYP3A4P08684 503 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 CDK4P11802 303 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 ANPEPP15144 967 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 FOSL1P15407 271 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 SERPINB1P30740 379 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 CASP4P49662 377 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 ARL4CP56559 192 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 KRT17Q04695 432 aa5.9□□□□□ -1.46
SCARB2-218ENST00000639715 NFIAQ12857 509 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms