RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 PDIA2Q13087 525 aaKnown RBP10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 CCNG2Q16589 344 aa10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 KYAT1Q16773 422 aa10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 DCAF6Q58WW2 860 aa10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 ZNF467Q7Z7K2 595 aaPredicted RBP10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 SAPCD2Q86UD0 394 aa10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 FAM131BQ86XD5 332 aa10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 SRRM1Q8IYB3 904 aaKnown RBP10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 NME8Q8N427 588 aa10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 TTC16Q8NEE8 873 aa10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 KATNBL1Q9H079 304 aa10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 WDR35Q9P2L0 1181 aa10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 GABRQQ9UN88 632 aa10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 NEU2Q9Y3R4 380 aa10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 IPPQ9Y573 584 aa10.15□□□□□ -0.78
CACNA1A-248ENST00000637774 CYB561D2O14569 222 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 CREB3O43889 395 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 B3GAT3O94766 335 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 GPD2P43304 727 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 PPP2R2AP63151 447 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 ZNF252P-AS1Q0IIN9 211 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 HIC1Q14526 733 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 ZKSCAN8Q15776 578 aaPredicted RBP10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 ZC3H12AQ5D1E8 599 aaKnown RBP10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 WSCD1Q658N2 575 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 MAP7D3Q8IWC1 876 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 SIX6OS1Q8N1H7 587 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 ADAM32Q8TC27 787 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 INTS9Q9NV88 658 aaKnown RBP10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 DDX56Q9NY93 547 aaKnown RBP10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 ST3GAL5Q9UNP4 418 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 TTLL3Q9Y4R7 772 aa10.15□□□□□ -0.79
CACNA1A-248ENST00000637774 SMIM35A0A1B0GVV1 85 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 EXOC1LA0A1B0GW35 172 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 HMGCRP04035 888 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 ZNF865P0CJ78 1059 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 GBP1P32455 592 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 LSP1P33241 339 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 BCAR1P56945 870 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 LMNB2Q03252 620 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 C9orf57Q5W0N0 161 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 CTAGE3PQ8IX95 158 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 PALM2Q8IXS6 379 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 CCDC13Q8IYE1 715 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 ADGRF2Q8IZF7 708 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 CCNYQ8ND76 341 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 ARHGEF2Q92974 986 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 APBA2Q99767 749 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 GPBP1L1Q9HC44 474 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 ZDHHC18Q9NUE0 388 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 LOC102724159A0A0B4J2E5 919 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 MEFVO15553 781 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 RIPK2O43353 540 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 TRPA1O75762 1119 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 MDH1P40925 334 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 NUMBP49757 651 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 SCNN1GP51170 649 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 AFF1P51825 1210 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 EIF3BP55884 814 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 PWP2Q15269 919 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 SIX1Q15475 284 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 HACE1Q8IYU2 909 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 MREGQ8N565 214 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 ZNF560Q96MR9 790 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 DNAI2Q9GZS0 605 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 ADAMTS10Q9H324 1103 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 XPNPEP3Q9NQH7 507 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 SLC45A1Q9Y2W3 748 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 ATP8B3O60423 1300 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 CD4P01730 458 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 RARGP13631 454 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 KDELR1P24390 212 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 FCGRTP55899 365 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 MAP3K7CLP57077 242 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 CDC42EP1Q00587 391 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 PRKCZQ05513 592 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 ENPEPQ07075 957 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 ZNF268Q14587 947 aaPredicted RBP10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 FAM187BQ17R55 369 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 TTC30AQ86WT1 665 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 THOC1Q96FV9 657 aaKnown RBP10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 SH3GL2Q99962 352 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 PCDHGC3Q9UN70 934 aa10.14□□□□□ -0.79
CACNA1A-248ENST00000637774 COL1A2P08123 1366 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 hCG_1818297A0A087WSY0 165 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 EIF3HO15372 352 aaKnown RBP eCLIP10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 KCNN4O15554 427 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 PPFIA2O75334 1257 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 GPR32O75388 356 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 ZBED1O96006 694 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 IGFBP6P24592 240 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 CD52P31358 61 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 YWHAGP61981 247 aaKnown RBP eCLIP10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 SOX4Q06945 474 aaPredicted RBP10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 SOWAHAQ2M3V2 549 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 MDH1BQ5I0G3 518 aa10.13□□□□□ -0.79
CACNA1A-248ENST00000637774 C6orf118Q5T5N4 469 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms