RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 USP27XA6NNY8 438 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 H3BNC9 293 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 C2CD2LO14523 706 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 TRIM66O15016 1216 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 ZNF500O60304 480 aaPredicted RBP14.12□□□□□ -0.15
LINC00643-207ENST00000637212 MTA2O94776 668 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 OR4Q2P0C623 313 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 HAPLN1P10915 354 aaPredicted RBP14.12□□□□□ -0.15
LINC00643-207ENST00000637212 CPB1P15086 417 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 ABCB4P21439 1286 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 SCNN1AP37088 669 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 NDUFV1P49821 464 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 ARPP19P56211 112 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 MAP3K7CLP57077 242 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 SMAD3P84022 425 aaKnown RBP14.12□□□□□ -0.15
LINC00643-207ENST00000637212 PTPN20Q4JDL3 420 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 RAB41Q5JT25 222 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 RNF19BQ6ZMZ0 732 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 PIGZQ86VD9 579 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 SCML4Q8N228 414 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 SLC35G2Q8TBE7 412 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 POF1BQ8WVV4 589 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 RFFLQ8WZ73 363 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 MCRS1Q96EZ8 462 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 CPXM1Q96SM3 734 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 C11orf70Q9BRQ4 267 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 EMILIN2Q9BXX0 1053 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 PRO3102Q9H379 93 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 DMAP1Q9NPF5 467 aaPredicted RBP14.12□□□□□ -0.15
LINC00643-207ENST00000637212 LZTFL1Q9NQ48 299 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 KRT82Q9NSB4 513 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 COMMD8Q9NX08 183 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 CNOT8Q9UFF9 292 aaKnown RBP14.12□□□□□ -0.15
LINC00643-207ENST00000637212 LCMT1Q9UIC8 334 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 COLQQ9Y215 455 aaPredicted RBP14.12□□□□□ -0.15
LINC00643-207ENST00000637212 SCINQ9Y6U3 715 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 DUSP10Q9Y6W6 482 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 NCANO14594 1321 aa14.12□□□□□ -0.15
LINC00643-207ENST00000637212 TCRBV5S1A1TA0A578 114 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 MTMR11A4FU01 709 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 SIGLEC16A6NMB1 481 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 FSCN2O14926 492 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 KIF5CO60282 957 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 BEST1O76090 585 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 FBXO21O94952 628 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 ARHGEF15O94989 841 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 ERBB2P04626 1255 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 ATF2P15336 505 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 RRM1P23921 792 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 CYP2F1P24903 491 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 GRIK1P39086 918 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 PBX2P40425 430 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 RPL10AP62906 217 aaKnown RBP14.11□□□□□ -0.15
LINC00643-207ENST00000637212 ROR1Q01973 937 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 MAMLD1Q13495 774 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 SMC1AQ14683 1233 aaKnown RBP14.11□□□□□ -0.15
LINC00643-207ENST00000637212 CCDC142Q17RM4 750 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 ARCQ7LC44 396 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 XYLT1Q86Y38 959 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 DNAAF5Q86Y56 855 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 C17orf53Q8N3J3 647 aaPredicted RBP14.11□□□□□ -0.15
LINC00643-207ENST00000637212 ATAD1Q8NBU5 361 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 C3orf20Q8ND61 904 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 ZMIZ2Q8NF64 920 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 ZNF653Q96CK0 615 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 SPATA17Q96L03 361 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 KCNK16Q96T55 309 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 TCF25Q9BQ70 676 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 LMAN2LQ9H0V9 348 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 SLC28A3Q9HAS3 691 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 ALG13Q9NP73 1137 aaKnown RBP14.11□□□□□ -0.15
LINC00643-207ENST00000637212 TLR9Q9NR96 1032 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 ST7Q9NRC1 585 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 ABI2Q9NYB9 513 aaPredicted RBP14.11□□□□□ -0.15
LINC00643-207ENST00000637212 GUCA1BQ9UMX6 200 aa14.11□□□□□ -0.15
LINC00643-207ENST00000637212 A0A0U1RQJ8 604 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 WDR27A2RRH5 827 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 HHLA1C9JL84 531 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 E5RJQ4 531 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 TULP2O00295 520 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 TEX28O15482 410 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 ADAM12O43184 909 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 LPXNO60711 386 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 GABBR2O75899 941 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 RPL17P18621 184 aaKnown RBP14.1□□□□□ -0.15
LINC00643-207ENST00000637212 NOP2P46087 812 aaKnown RBP14.1□□□□□ -0.15
LINC00643-207ENST00000637212 RGS7P49802 495 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 ERVFC1P60507 584 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 SLC6A3Q01959 620 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 GPM6BQ13491 265 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 PM20D1Q6GTS8 502 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 RTL10Q7L3V2 364 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 SCUBE3Q8IX30 993 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 FEZF2Q8TBJ5 459 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 ATRIPQ8WXE1 791 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 ARHGEF26Q96DR7 871 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 KLHL5Q96PQ7 755 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 NKX2-4Q9H2Z4 354 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 LRRC4Q9HBW1 653 aa14.1□□□□□ -0.15
LINC00643-207ENST00000637212 CTTNBP2NLQ9P2B4 639 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms