RNA–Protein interactions for RNA: ENST00000636670.1

CACNA1A-229, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-229ENST00000636670 C4orf50Q6ZRC1 276 aa17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 LRRTM3Q86VH5 581 aa17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 TTC9BQ8N6N2 239 aa17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 ATAD1Q8NBU5 361 aa17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 ST13P5Q8NFI4 369 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 SEMA4DQ92854 862 aa17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 FGF14Q92915 247 aa17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 SDCBP2Q9H190 292 aa17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 CYP3A43Q9HB55 503 aa17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 APOBEC3GQ9HC16 384 aaKnown RBP17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 ABI2Q9NYB9 513 aaPredicted RBP17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 NME7Q9Y5B8 376 aa17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.25■□□□□ 0.35
CACNA1A-229ENST00000636670 A8MXQ7 604 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 AFPP02771 609 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 CD72P21854 359 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 GNL1P36915 607 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 PSMC1P62191 440 aaKnown RBP17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 CETN1Q12798 172 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 PPP2R5DQ14738 602 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 WDR44Q5JSH3 913 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 PARM1Q6UWI2 310 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 UNQ6494/PRO21346Q6UXR6 183 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 UNC93AQ86WB7 457 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 TTC39CQ8N584 583 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 KDF1Q8NAX2 398 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 LEMD2Q8NC56 503 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 MYLPFQ96A32 169 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 CRTAC1Q9NQ79 661 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 AVENQ9NQS1 362 aaPredicted RBP17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 TMLHEQ9NVH6 421 aa17.24■□□□□ 0.35
CACNA1A-229ENST00000636670 C1QTNF9BB2RNN3 333 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 C1QTNF9P0C862 333 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 HAPLN1P10915 354 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 TRIM21P19474 475 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 LMO2P25791 158 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 ALDH1A3P47895 512 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 TYRO3Q06418 890 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 KCNH2Q12809 1159 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 MGAT5BQ3V5L5 792 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 PABPC1LQ4VXU2 614 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 PRR23BQ6ZRT6 265 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 C11orf57Q6ZUT1 292 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 GRASPQ7Z6J2 395 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 IRF2BP1Q8IU81 584 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 SPATA2LQ8IUW3 424 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 B3GALNT2Q8NCR0 500 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 MYCBPAPQ8TBZ2 947 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 ENOX1Q8TC92 643 aaKnown RBP17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 ELMO3Q96BJ8 720 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 TNIP3Q96KP6 325 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 SEPT5Q99719 369 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 MAGEC2Q9UBF1 373 aaPredicted RBP17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 GTF3C4Q9UKN8 822 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 ASB3Q9Y575 518 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 COL4A3Q01955 1670 aa17.23■□□□□ 0.35
CACNA1A-229ENST00000636670 SETXQ7Z333 2677 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 MYBPHLA2RUH7 354 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 TM4SF5O14894 197 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 ATF6P18850 670 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 TARSP26639 723 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 MAGEA11P43364 429 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 LIMK1P53667 647 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 EPHB3P54753 998 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 EPHA5P54756 1037 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 CDH8P55286 799 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 MTAPQ13126 283 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 VEPH1Q14D04 833 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 MAN2A1Q16706 1144 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 CCDC142Q17RM4 750 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 MDH1BQ5I0G3 518 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 IQCEQ6IPM2 695 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 LRSAM1Q6UWE0 723 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 MAMSTRQ6ZN01 415 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 MTSS1LQ765P7 747 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 ITIH5Q86UX2 942 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 DNAI2Q9GZS0 605 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 DNAJC25Q9H1X3 360 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 DPEP3Q9H4B8 488 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 HCFC1R1Q9NWW0 138 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 DNMT3BQ9UBC3 853 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 MRPS17Q9Y2R5 130 aaKnown RBP17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 NFE2L3Q9Y4A8 694 aa17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 KIF26AQ9ULI4 1882 aaPredicted RBP17.22■□□□□ 0.35
CACNA1A-229ENST00000636670 ATP8B3O60423 1300 aa17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 FRYQ5TBA9 3013 aa17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 ATP2C2O75185 946 aa17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 CILPO75339 1184 aa17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 LETM1O95202 739 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 RHOP08100 348 aa17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 PDGFRBP09619 1106 aa17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 TDGF1P13385 188 aa17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 PTPN2P17706 415 aa17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 PTPN1P18031 435 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 FSHRP23945 695 aa17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 TBXAS1P24557 533 aaPredicted RBP17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 EEF1GP26641 437 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 MTIF2P46199 727 aaKnown RBP17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 NDST1P52848 882 aa17.21■□□□□ 0.35
CACNA1A-229ENST00000636670 RPL10AP62906 217 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms