RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	WARS	P23381	471 aa	Known RBP	12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	GRIK1	P39086	918 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	MAGEA11	P43364	429 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	IFRD2	Q12894	506 aa	Predicted RBP	12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	KCNB1	Q14721	858 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SNRNP35	Q16560	246 aa	Known RBP	12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	FAM26F	Q5R3K3	315 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	C4orf50	Q6ZRC1	276 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TRAPPC11	Q7Z392	1133 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CD101	Q93033	1021 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	MMS19	Q96T76	1030 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	BLZF1	Q9H2G9	400 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	LINC00597	Q9H2U6	94 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	AGPAT3	Q9NRZ7	376 aa		12.93	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SOBP	A7XYQ1	873 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482		F8VP50	259 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CLDN5	O00501	218 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	DCLK1	O15075	740 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	KIAA0391	O15091	583 aa	Known RBP	12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	EIF3D	O15371	548 aa	Known RBP eCLIP	12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	PPP6R2	O75170	966 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ADRB1	P08588	477 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	HDC	P19113	662 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TNNI1	P19237	187 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	DRD1	P21728	446 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	OPRD1	P41143	372 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	RAP1GAP	P47736	663 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CASP4	P49662	377 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SEC13	P55735	322 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CYP24A1	Q07973	514 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SURF1	Q15526	300 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	DUOXA2	Q1HG44	320 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	GAB4	Q2WGN9	574 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	AASDH	Q4L235	1098 aa	Predicted RBP	12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TCEAL6	Q6IPX3	200 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	DENND5B	Q6ZUT9	1274 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	STXBP4	Q6ZWJ1	553 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	DPH6	Q7L8W6	267 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SFTPA1	Q8IWL2	248 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	FSIP1	Q8NA03	581 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ZNF507	Q8TCN5	953 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SCFD1	Q8WVM8	642 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ZNF516	Q92618	1163 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ATP2A3	Q93084	1043 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TCEAL3	Q969E4	200 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CCDC127	Q96BQ5	260 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CGRRF1	Q99675	332 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	BACH2	Q9BYV9	841 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ZNF518B	Q9C0D4	1074 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	NYNRIN	Q9P2P1	1898 aa	Known RBP	12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ARHGAP26	Q9UNA1	814 aa		12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	R3HCC1	Q9Y3T6	440 aa	Known RBP	12.92	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ACACB	O00763	2458 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	LEFTY2	O00292	366 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ATG13	O75143	517 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ANXA13	P27216	316 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	EHHADH	Q08426	723 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	MESP2	Q0VG99	397 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	DMC1	Q14565	340 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	PSMD6	Q15008	389 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	VSTM1	Q6UX27	236 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	HS2ST1	Q7LGA3	356 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CACNA2D4	Q7Z3S7	1137 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	GRAMD1C	Q8IYS0	662 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	OR6B3	Q8NGW1	331 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	MYCBPAP	Q8TBZ2	947 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	PLEKHO2	Q8TD55	490 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SPATA17	Q96L03	361 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TTLL2	Q9BWV7	592 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TPSD1	Q9BZJ3	242 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	RNF38	Q9H0F5	515 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SMPD4	Q9NXE4	827 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	INVS	Q9Y283	1065 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TMEM131	Q92545	1883 aa		12.91	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	UBE4B	O95155	1302 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CCDC163	A0A0D9SF12	145 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	POLR2D	O15514	142 aa	Known RBP	12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CUTA	O60888	179 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	KRT37	O76014	449 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	ABL1	P00519	1130 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CYP17A1	P05093	508 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	TCF3	P15923	654 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	MPL	P40238	635 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	MYL6	P60660	151 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	AMPD2	Q01433	879 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	CUL4B	Q13620	913 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	WDR72	Q3MJ13	1102 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	PLK5	Q496M5	336 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SCARA5	Q6ZMJ2	495 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	UNC13D	Q70J99	1090 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SYT13	Q7L8C5	426 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	FILIP1	Q7Z7B0	1213 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	C12orf40	Q86WS4	652 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	C12orf50	Q8NA57	414 aa	Predicted RBP	12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	XXYLT1	Q8NBI6	393 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	FNBP1	Q96RU3	617 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	C7orf25	Q9BPX7	421 aa		12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	DUSP15	Q9H1R2	295 aa	Predicted RBP	12.9	□□□□□ -0.34
SOX2-OT-256	ENST00000630482	SNX25	Q9H3E2	840 aa		12.9	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms