RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 PDCD7Q8N8D1 485 aaKnown RBP12.84□□□□□ -0.35
CHD2-218ENST00000629346 LSM14AQ8ND56 463 aaKnown RBP12.84□□□□□ -0.35
CHD2-218ENST00000629346 KIF2CQ99661 725 aa12.84□□□□□ -0.35
CHD2-218ENST00000629346 PYM1Q9BRP8 204 aaKnown RBP12.84□□□□□ -0.35
CHD2-218ENST00000629346 CLMPQ9H6B4 373 aa12.84□□□□□ -0.35
CHD2-218ENST00000629346 BRMS1Q9HCU9 246 aa12.84□□□□□ -0.35
CHD2-218ENST00000629346 ARHGEF4Q9NR80 690 aa12.84□□□□□ -0.35
CHD2-218ENST00000629346 RBM19Q9Y4C8 960 aaKnown RBP12.84□□□□□ -0.35
CHD2-218ENST00000629346 PLXND1Q9Y4D7 1925 aa12.84□□□□□ -0.35
CHD2-218ENST00000629346 GOLGA4Q13439 2230 aaKnown RBP12.83□□□□□ -0.36
CHD2-218ENST00000629346 BTBD18B2RXH4 712 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 NDUFS2O75306 463 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 CTDNEP1O95476 244 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 FOSBP53539 338 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 ZXDBP98169 803 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 ATP2C1P98194 919 aaPredicted RBP12.83□□□□□ -0.36
CHD2-218ENST00000629346 MCL1Q07820 350 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 SMARCB1Q12824 385 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 DHCR24Q15392 516 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 SAFBQ15424 915 aaKnown RBP eCLIP12.83□□□□□ -0.36
CHD2-218ENST00000629346 SYCP2LQ5T4T6 812 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 SPATA1Q5VX52 437 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 ADGRG2Q8IZP9 1017 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 WASF1Q92558 559 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 GTF3C6Q969F1 213 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 HNRNPABQ99729 332 aaKnown RBP12.83□□□□□ -0.36
CHD2-218ENST00000629346 GAREM1Q9H706 876 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 TM7SF3Q9NS93 570 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 GCNT4Q9P109 453 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 ORC3Q9UBD5 711 aaPredicted RBP12.83□□□□□ -0.36
CHD2-218ENST00000629346 SUSD2Q9UGT4 822 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 DSEQ9UL01 958 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 KIAA1024Q9UPX6 916 aa12.83□□□□□ -0.36
CHD2-218ENST00000629346 ANK1P16157 1881 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 LEFTY2O00292 366 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 PLK4O00444 970 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 ZBTB24O43167 697 aaPredicted RBP12.82□□□□□ -0.36
CHD2-218ENST00000629346 HLA-EP13747 358 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 CYP2F1P24903 491 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 GRIA2P42262 883 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 TNFRSF4P43489 277 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 RPL10AP62906 217 aaKnown RBP12.82□□□□□ -0.36
CHD2-218ENST00000629346 SEMG2Q02383 582 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 KCNC4Q03721 635 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 ENOX2Q16206 610 aaKnown RBP12.82□□□□□ -0.36
CHD2-218ENST00000629346 JADE1Q6IE81 842 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 ZNF513Q8N8E2 541 aaPredicted RBP12.82□□□□□ -0.36
CHD2-218ENST00000629346 NECAB1Q8N987 351 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 FSIP1Q8NA03 581 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 BICD1Q96G01 975 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 ZNF419Q96HQ0 510 aaPredicted RBP12.82□□□□□ -0.36
CHD2-218ENST00000629346 CDC6Q99741 560 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 ARID3AQ99856 593 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 ZDHHC5Q9C0B5 715 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 MIR1-1HGQ9H1L0 117 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 RPF1Q9H9Y2 349 aaKnown RBP12.82□□□□□ -0.36
CHD2-218ENST00000629346 CD93Q9NPY3 652 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 DDX19AQ9NUU7 478 aaKnown RBP12.82□□□□□ -0.36
CHD2-218ENST00000629346 ARHGAP26Q9UNA1 814 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.82□□□□□ -0.36
CHD2-218ENST00000629346 TSC2P49815 1807 aa12.82□□□□□ -0.36
CHD2-218ENST00000629346 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.81□□□□□ -0.36
CHD2-218ENST00000629346 TBC1D3BA6NDS4 549 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 PIRO00625 290 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 TLX3O43711 291 aaPredicted RBP12.81□□□□□ -0.36
CHD2-218ENST00000629346 CILPO75339 1184 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 ZNF217O75362 1048 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 NOL4O94818 638 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 DKK1O94907 266 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 HOXB2P14652 356 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 RAD51AP2Q09MP3 1159 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 C8orf34Q49A92 452 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 WDR45BQ5MNZ6 344 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 RHBDF2Q6PJF5 856 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 GPR155Q7Z3F1 870 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 SCN4BQ8IWT1 228 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 ZCCHC9Q8N567 271 aaKnown RBP12.81□□□□□ -0.36
CHD2-218ENST00000629346 NAT16Q8N8M0 369 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 NSUN7Q8NE18 718 aaKnown RBP12.81□□□□□ -0.36
CHD2-218ENST00000629346 BAHD1Q8TBE0 780 aaPredicted RBP12.81□□□□□ -0.36
CHD2-218ENST00000629346 TRMT2BQ96GJ1 504 aaKnown RBP12.81□□□□□ -0.36
CHD2-218ENST00000629346 MYRFLQ96LU7 910 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 RUSC1Q9BVN2 902 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 SLC6A17Q9H1V8 727 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.81□□□□□ -0.36
CHD2-218ENST00000629346 BTBD3Q9Y2F9 522 aa12.81□□□□□ -0.36
CHD2-218ENST00000629346 FNDC3AQ9Y2H6 1198 aaKnown RBP12.81□□□□□ -0.36
CHD2-218ENST00000629346 UNC79Q9P2D8 2635 aa12.8□□□□□ -0.36
CHD2-218ENST00000629346 A0A0A0MRY4 1105 aa12.8□□□□□ -0.36
CHD2-218ENST00000629346 MEI4A8MW99 385 aa12.8□□□□□ -0.36
CHD2-218ENST00000629346 E9PMD0 336 aa12.8□□□□□ -0.36
CHD2-218ENST00000629346 RRP8O43159 456 aaKnown RBP12.8□□□□□ -0.36
CHD2-218ENST00000629346 NFICP08651 508 aa12.8□□□□□ -0.36
CHD2-218ENST00000629346 FDPSP14324 419 aaKnown RBP12.8□□□□□ -0.36
CHD2-218ENST00000629346 TCF3P15923 654 aa12.8□□□□□ -0.36
CHD2-218ENST00000629346 NDUFV2P19404 249 aa12.8□□□□□ -0.36
CHD2-218ENST00000629346 PAX3P23760 479 aa12.8□□□□□ -0.36
CHD2-218ENST00000629346 MATKP42679 507 aa12.8□□□□□ -0.36
CHD2-218ENST00000629346 TSPY1Q01534 308 aa12.8□□□□□ -0.36
CHD2-218ENST00000629346 MAPK7Q13164 816 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms