RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 TDRD10Q5VZ19 366 aaKnown RBP17.68■□□□□ 0.42
PDCD6-214ENST00000628729 CC2D1AQ6P1N0 951 aaPredicted RBP17.68■□□□□ 0.42
PDCD6-214ENST00000628729 DENND5BQ6ZUT9 1274 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 HS2ST1Q7LGA3 356 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 WDR5BQ86VZ2 330 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 SPRYD3Q8NCJ5 442 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 SH3RF2Q8TEC5 729 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 SECISBP2LQ93073 1101 aaKnown RBP17.68■□□□□ 0.42
PDCD6-214ENST00000628729 FNBP1Q96RU3 617 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 ZNF518BQ9C0D4 1074 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 SMYD3Q9H7B4 428 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 DUS2Q9NX74 493 aaKnown RBP17.68■□□□□ 0.42
PDCD6-214ENST00000628729 SPTBN2O15020 2390 aa17.68■□□□□ 0.42
PDCD6-214ENST00000628729 PVALEFA0A1B0GWK0 134 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 LRRIQ3A6PVS8 624 aaPredicted RBP17.67■□□□□ 0.42
PDCD6-214ENST00000628729 STAU1O95793 577 aaKnown RBP17.67■□□□□ 0.42
PDCD6-214ENST00000628729 RETP07949 1114 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 TCF3P15923 654 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 GRIK1P39086 918 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 RAP1GAPP47736 663 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 GALK1P51570 392 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 ATXN1P54253 815 aaKnown RBP17.67■□□□□ 0.42
PDCD6-214ENST00000628729 SNRPFP62306 86 aaKnown RBP17.67■□□□□ 0.42
PDCD6-214ENST00000628729 LMNB2Q03252 620 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 GRSF1Q12849 480 aaKnown RBP eCLIP17.67■□□□□ 0.42
PDCD6-214ENST00000628729 KCNB1Q14721 858 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 KNOP1Q1ED39 458 aaKnown RBP17.67■□□□□ 0.42
PDCD6-214ENST00000628729 FAM160A2Q8N612 972 aaPredicted RBP17.67■□□□□ 0.42
PDCD6-214ENST00000628729 GPR161Q8N6U8 529 aaKnown RBP17.67■□□□□ 0.42
PDCD6-214ENST00000628729 SDCBP2Q9H190 292 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 LINC00597Q9H2U6 94 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 RCOR1Q9UKL0 485 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 RAB23Q9ULC3 237 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 ARHGAP26Q9UNA1 814 aa17.67■□□□□ 0.42
PDCD6-214ENST00000628729 R3HCC1Q9Y3T6 440 aaKnown RBP17.67■□□□□ 0.42
PDCD6-214ENST00000628729 SPAG17Q6Q759 2223 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 VNN1O95497 513 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 OLFM2O95897 454 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 PTPN1P18031 435 aaKnown RBP17.66■□□□□ 0.42
PDCD6-214ENST00000628729 GNL1P36915 607 aaPredicted RBP17.66■□□□□ 0.42
PDCD6-214ENST00000628729 TNNC1P63316 161 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 NOP14P78316 857 aaKnown RBP17.66■□□□□ 0.42
PDCD6-214ENST00000628729 MAPRE1Q15691 268 aaKnown RBP17.66■□□□□ 0.42
PDCD6-214ENST00000628729 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.66■□□□□ 0.42
PDCD6-214ENST00000628729 CPA6Q8N4T0 437 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 B3GALNT2Q8NCR0 500 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 OR6B3Q8NGW1 331 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 C8orf48Q96LL4 319 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 P2RY13Q9BPV8 354 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 B3GNT5Q9BYG0 378 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 RNF38Q9H0F5 515 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 SNX25Q9H3E2 840 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 KCTD10Q9H3F6 313 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 DMAC2Q9NW81 257 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 FAM13BQ9NYF5 915 aa17.66■□□□□ 0.42
PDCD6-214ENST00000628729 NXF1Q9UBU9 619 aaKnown RBP17.66■□□□□ 0.42
PDCD6-214ENST00000628729 RALGAPA1Q6GYQ0 2036 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 ZNF840PA6NDX5 716 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 SCAMP3O14828 347 aaKnown RBP17.65■□□□□ 0.42
PDCD6-214ENST00000628729 TRIM66O15016 1216 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 EXOC3O60645 756 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 OAS1P00973 400 aaKnown RBP17.65■□□□□ 0.42
PDCD6-214ENST00000628729 SLFN14P0C7P3 912 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 PFKFB1P16118 471 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 HDCP19113 662 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 CNR2P34972 360 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 IFNAR2P48551 515 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 CDH8P55286 799 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 DLG4P78352 724 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 CLDN10P78369 228 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 MESP2Q0VG99 397 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 SCARA5Q6ZMJ2 495 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 FSIP1Q8NA03 581 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 PARD3BQ8TEW8 1205 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 ATP2A3Q93084 1043 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 PAGE5Q96GU1 130 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 CEP295NLQ96MC4 621 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 HHIPQ96QV1 700 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 VRTNQ9H8Y1 702 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 SEMA4GQ9NTN9 838 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 ZDHHC9Q9Y397 364 aa17.65■□□□□ 0.42
PDCD6-214ENST00000628729 A0A1B0GVL5 298 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 LEFTY2O00292 366 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 GDF9O60383 454 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 C4BPAP04003 597 aaKnown RBP17.64■□□□□ 0.41
PDCD6-214ENST00000628729 CHRM1P11229 460 aaPredicted RBP17.64■□□□□ 0.41
PDCD6-214ENST00000628729 DRD1P21728 446 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 ANXA13P27216 316 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 OPRD1P41143 372 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 KMT5BQ4FZB7 885 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 C1orf220Q5T0J3 134 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 ATL3Q6DD88 541 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 PRR23CQ6ZRP0 262 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 PAQR9Q6ZVX9 377 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 SFTPA1Q8IWL2 248 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 RPLP0P6Q8NHW5 317 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 CD101Q93033 1021 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 ELOVL4Q9GZR5 314 aa17.64■□□□□ 0.41
PDCD6-214ENST00000628729 CGNQ9P2M7 1197 aaKnown RBP17.64■□□□□ 0.41
PDCD6-214ENST00000628729 HMGXB4Q9UGU5 601 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms