RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 GNL1P36915 607 aaPredicted RBP14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 RAP1GAPP47736 663 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 ME1P48163 572 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 ATXN1P54253 815 aaKnown RBP14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 CLDN10P78369 228 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 CYP27A1Q02318 531 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 KNOP1Q1ED39 458 aaKnown RBP14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 WDR72Q3MJ13 1102 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 C1orf220Q5T0J3 134 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 LAIR1Q6GTX8 287 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 VSTM1Q6UX27 236 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 C4orf50Q6ZRC1 276 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 DGLUCYQ7Z3D6 616 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 SYNPOQ8N3V7 929 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 SH3RF2Q8TEC5 729 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 PARD3BQ8TEW8 1205 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 OSCP1Q8WVF1 389 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 PAGE5Q96GU1 130 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 SMYD3Q9H7B4 428 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 MAGEF1Q9HAY2 307 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 UXTQ9UBK9 157 aaPredicted RBP14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 HPSEQ9Y251 543 aa14.44□□□□□ -0.1
SOX2-OT-241ENST00000626948 MYOFQ9NZM1 2061 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 RALGAPA1Q6GYQ0 2036 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 TRAV19A0A0A6YYK7 116 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 A0A1B0GVL5 298 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 ZNF840PA6NDX5 716 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 CKMP06732 381 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 USP17L7P0C7H9 530 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 SLFN14P0C7P3 912 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 TCF3P15923 654 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 GRIK1P39086 918 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 OPRD1P41143 372 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 SNRPFP62306 86 aaKnown RBP14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 SIM2Q14190 667 aaPredicted RBP14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 KMT5BQ4FZB7 885 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 PRR23BQ6ZRT6 265 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 DENND5BQ6ZUT9 1274 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 WDR5BQ86VZ2 330 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 SFTPA1Q8IWL2 248 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 FAM160A2Q8N612 972 aaPredicted RBP14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 TTC16Q8NEE8 873 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 OR6B3Q8NGW1 331 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 C8orf48Q96LL4 319 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 KCNK16Q96T55 309 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 VRTNQ9H8Y1 702 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 DUS2Q9NX74 493 aaKnown RBP14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 ARHGAP26Q9UNA1 814 aa14.43□□□□□ -0.1
SOX2-OT-241ENST00000626948 SPAG17Q6Q759 2223 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 SCAMP3O14828 347 aaKnown RBP14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 GDF9O60383 454 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 OAS1P00973 400 aaKnown RBP14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 RETP07949 1114 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 PRR29P0C7W0 189 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 PFKFB1P16118 471 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 HDCP19113 662 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 PGFP49763 221 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 NOP14P78316 857 aaKnown RBP14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 PPP2R5DQ14738 602 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 PDGFRLQ15198 375 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 HSCBQ8IWL3 235 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 TMEM174Q8WUU8 243 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 WBP2Q969T9 261 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 ZFRQ96KR1 1074 aaKnown RBP14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 FNBP1Q96RU3 617 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 P2RY13Q9BPV8 354 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 NXF1Q9UBU9 619 aaKnown RBP14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 HMGXB4Q9UGU5 601 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 USP18Q9UMW8 372 aa14.42□□□□□ -0.1
SOX2-OT-241ENST00000626948 LEFTY2O00292 366 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 TNFRSF10BO14763 440 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 EXOC3O60645 756 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 BEST1O76090 585 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 FAM163BP0C2L3 166 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 GRSF1Q12849 480 aaKnown RBP eCLIP14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 TAF10Q12962 218 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 ATL3Q6DD88 541 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 CC2D1AQ6P1N0 951 aaPredicted RBP14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 HS2ST1Q7LGA3 356 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 B3GALNT2Q8NCR0 500 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 ZMIZ2Q8NF64 920 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 SNX25Q9H3E2 840 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 RXFP3Q9NSD7 469 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 SEMA4GQ9NTN9 838 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 FAM13BQ9NYF5 915 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 GMEB2Q9UKD1 530 aa14.41□□□□□ -0.1
SOX2-OT-241ENST00000626948 DCDC2BA2VCK2 349 aa14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 A8MXQ7 604 aa14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 K7EQS6 105 aa14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 ATICP31939 592 aa14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 CNR2P34972 360 aa14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 TNNC1P63316 161 aa14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 SLC7A9P82251 487 aa14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 ORC1Q13415 861 aa14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 KCNB1Q14721 858 aa14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 MAPRE1Q15691 268 aaKnown RBP14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 CCDC6Q16204 474 aa14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 SPOPLQ6IQ16 392 aa14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 KBTBD6Q86V97 674 aa14.4□□□□□ -0.1
SOX2-OT-241ENST00000626948 C12orf40Q86WS4 652 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms