RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ENPEPQ07075 957 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 MTF1Q14872 753 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 PON2Q15165 354 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 EDRF1Q3B7T1 1238 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 C1orf220Q5T0J3 134 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 TRIM68Q6AZZ1 485 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 TSSK4Q6SA08 328 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 SCARA5Q6ZMJ2 495 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 FAM186BQ8IYM0 893 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 FMR1NBQ8N0W7 255 aaPredicted RBP11.53□□□□□ -0.56
SSBP4-215ENST00000625926 SYNPOQ8N3V7 929 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 SPEM1Q8N4L4 309 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 ARL14EPQ8N8R7 260 aaPredicted RBP11.53□□□□□ -0.56
SSBP4-215ENST00000625926 ZBTB44Q8NCP5 570 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 NELL1Q92832 810 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 ELMO3Q96BJ8 720 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 SLC22A12Q96S37 553 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 MED10Q9BTT4 135 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 FAM126AQ9BYI3 521 aaPredicted RBP11.53□□□□□ -0.56
SSBP4-215ENST00000625926 IMPG2Q9BZV3 1241 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 SDCBP2Q9H190 292 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 EBF3Q9H4W6 596 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 HPS4Q9NQG7 708 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 GCNT4Q9P109 453 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 MYH11P35749 1972 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 ATP8B3O60423 1300 aa11.53□□□□□ -0.56
SSBP4-215ENST00000625926 TRIP11Q15643 1979 aa11.52□□□□□ -0.56
SSBP4-215ENST00000625926 NOTCH4Q99466 2003 aa11.52□□□□□ -0.56
SSBP4-215ENST00000625926 ZNF840PA6NDX5 716 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 CLDN5O00501 218 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 SMC2O95347 1197 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 HLA-DRAP01903 254 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 TRIM21P19474 475 aaKnown RBP11.52□□□□□ -0.57
SSBP4-215ENST00000625926 PIK3CAP42336 1068 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 GCLMP48507 274 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 CACNA2D1P54289 1103 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 NRLP54845 237 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 TAF10Q12962 218 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 PNOCQ13519 176 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 ZNF77Q15935 545 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 ZCWPW2Q504Y3 356 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 ACOT1Q86TX2 421 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 UNC93AQ86WB7 457 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 SMYD4Q8IYR2 804 aaPredicted RBP11.52□□□□□ -0.57
SSBP4-215ENST00000625926 NUP93Q8N1F7 819 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 CRYBG2Q8N1P7 616 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 CCDC150Q8NCX0 1101 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 TTC16Q8NEE8 873 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 ENGASEQ8NFI3 743 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 RIN3Q8TB24 985 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 SH3RF2Q8TEC5 729 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 OSCP1Q8WVF1 389 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 EXOC4Q96A65 974 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 SLITRK1Q96PX8 696 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 GSDMAQ96QA5 445 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 KCNK16Q96T55 309 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 RBM12Q9NTZ6 932 aaKnown RBP11.52□□□□□ -0.57
SSBP4-215ENST00000625926 DUS2Q9NX74 493 aaKnown RBP11.52□□□□□ -0.57
SSBP4-215ENST00000625926 HOOK1Q9UJC3 728 aaKnown RBP11.52□□□□□ -0.57
SSBP4-215ENST00000625926 ARHGAP26Q9UNA1 814 aa11.52□□□□□ -0.57
SSBP4-215ENST00000625926 DOCK8Q8NF50 2099 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 PDCD11Q14690 1871 aaKnown RBP11.51□□□□□ -0.57
SSBP4-215ENST00000625926 OTOL1A6NHN0 477 aaPredicted RBP11.51□□□□□ -0.57
SSBP4-215ENST00000625926 TRDMT1O14717 391 aaKnown RBP11.51□□□□□ -0.57
SSBP4-215ENST00000625926 CETN3O15182 167 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 RTN3O95197 1032 aaPredicted RBP11.51□□□□□ -0.57
SSBP4-215ENST00000625926 ABL1P00519 1130 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 TRIM49P0CI25 452 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 TRIM49CP0CI26 452 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 ARSAP15289 507 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 TCF3P15923 654 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 YWHAQP27348 245 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 GTF2H1P32780 548 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 ASPAP45381 313 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 IFNAR2P48551 515 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 NDST1P52848 882 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 MCCD1P59942 119 aaPredicted RBP11.51□□□□□ -0.57
SSBP4-215ENST00000625926 SATB1Q01826 763 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 PPP3CAQ08209 521 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 GRSF1Q12849 480 aaKnown RBP eCLIP11.51□□□□□ -0.57
SSBP4-215ENST00000625926 CCINQ13939 588 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 GAS6Q14393 721 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 ZNF658Q5TYW1 1059 aaPredicted RBP11.51□□□□□ -0.57
SSBP4-215ENST00000625926 KRT39Q6A163 491 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 SPOPLQ6IQ16 392 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 PAQR9Q6ZVX9 377 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 FAM35AQ86V20 835 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 CPA6Q8N4T0 437 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 PDZD8Q8NEN9 1154 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 TAS1R2Q8TE23 839 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 COL26A1Q96A83 441 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 SMARCD1Q96GM5 515 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 TIGD1Q96MW7 591 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 GTPBP4Q9BZE4 634 aaKnown RBP11.51□□□□□ -0.57
SSBP4-215ENST00000625926 ECT2Q9H8V3 914 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 CYP3A43Q9HB55 503 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 TMEM8AQ9HCN3 771 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 DMAP1Q9NPF5 467 aaPredicted RBP11.51□□□□□ -0.57
SSBP4-215ENST00000625926 TMEM30AQ9NV96 361 aa11.51□□□□□ -0.57
SSBP4-215ENST00000625926 COMMD8Q9NX08 183 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms