RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 B4GALT3O60512 393 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 B3GAT3O94766 335 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 HSPA8P11142 646 aaKnown RBP10.88□□□□□ -0.67
ATRX-216ENST00000624403 PYGMP11217 842 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 KRT3P12035 628 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 COL6A1P12109 1028 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 PTPN1P18031 435 aaKnown RBP10.88□□□□□ -0.67
ATRX-216ENST00000624403 TKTP29401 623 aaKnown RBP10.88□□□□□ -0.67
ATRX-216ENST00000624403 RFC1P35251 1148 aaPredicted RBP10.88□□□□□ -0.67
ATRX-216ENST00000624403 C1QTNF8P60827 252 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 MRPS25P82663 173 aaKnown RBP10.88□□□□□ -0.67
ATRX-216ENST00000624403 FAAP100Q0VG06 881 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 CCDC142Q17RM4 750 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 PAN2Q504Q3 1202 aaKnown RBP10.88□□□□□ -0.67
ATRX-216ENST00000624403 SEL1L2Q5TEA6 688 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 KIAA0319Q5VV43 1072 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 PMF1Q6P1K2 205 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 FBXO46Q6PJ61 603 aaPredicted RBP10.88□□□□□ -0.67
ATRX-216ENST00000624403 DCLRE1AQ6PJP8 1040 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 FAM183BPQ6ZVS7 135 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 RHOT1Q8IXI2 618 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 KLHL7Q8IXQ5 586 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 DNAJC5GQ8N7S2 189 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 URGCPQ8TCY9 931 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 SLC2A14Q8TDB8 520 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 DIS3LQ8TF46 1054 aaKnown RBP10.88□□□□□ -0.67
ATRX-216ENST00000624403 STK32AQ8WU08 396 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 SLC35F5Q8WV83 523 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 SCLYQ96I15 445 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 KRT12Q99456 494 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 MIS12Q9H081 205 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 HIPK3Q9H422 1215 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 TMEM161AQ9NX61 479 aa10.88□□□□□ -0.67
ATRX-216ENST00000624403 DDX43Q9NXZ2 648 aaKnown RBP10.88□□□□□ -0.67
ATRX-216ENST00000624403 TIMM13Q9Y5L4 95 aaPredicted RBP10.88□□□□□ -0.67
ATRX-216ENST00000624403 DCDC2CA8MYV0 355 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 F8VP50 259 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 PSTPIP1O43586 416 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 DDHD2O94830 711 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 ODC1P11926 461 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 PAX3P23760 479 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 PSMA2P25787 234 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 SSR1P43307 286 aaKnown RBP10.87□□□□□ -0.67
ATRX-216ENST00000624403 BRCC3P46736 316 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 LHX1P48742 406 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 BCAT1P54687 386 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 CCL23P55773 120 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 VSNL1P62760 191 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 TLE2Q04725 743 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 DSC1Q08554 894 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 BST2Q10589 180 aaKnown RBP10.87□□□□□ -0.67
ATRX-216ENST00000624403 PIGHQ14442 188 aaPredicted RBP10.87□□□□□ -0.67
ATRX-216ENST00000624403 CLUL1Q15846 466 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 MDH1BQ5I0G3 518 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 FAM102AQ5T9C2 384 aaPredicted RBP10.87□□□□□ -0.67
ATRX-216ENST00000624403 OR6B2Q6IFH4 312 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 CCDC70Q6NSX1 233 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 C8orf74Q6P047 294 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 CC2D1AQ6P1N0 951 aaPredicted RBP10.87□□□□□ -0.67
ATRX-216ENST00000624403 ADAT2Q7Z6V5 191 aaKnown RBP10.87□□□□□ -0.67
ATRX-216ENST00000624403 TMEM110Q86TL2 294 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 ZNF280BQ86YH2 543 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 FUKQ8N0W3 1084 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 EMC1Q8N766 993 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 NIPA2Q8N8Q9 360 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 HASPINQ8TF76 798 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 HDAC7Q8WUI4 952 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 RSPH1Q8WYR4 309 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 APBB2Q92870 758 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 ARMC5Q96C12 935 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 NAP1L3Q99457 506 aaPredicted RBP10.87□□□□□ -0.67
ATRX-216ENST00000624403 HNRNPABQ99729 332 aaKnown RBP10.87□□□□□ -0.67
ATRX-216ENST00000624403 RTP3Q9BQQ7 232 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 SYT15Q9BQS2 421 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 ELAC1Q9H777 363 aaKnown RBP10.87□□□□□ -0.67
ATRX-216ENST00000624403 CRTAC1Q9NQ79 661 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 TBC1D13Q9NVG8 400 aa10.87□□□□□ -0.67
ATRX-216ENST00000624403 ARGLU1Q9NWB6 273 aaPredicted RBP10.87□□□□□ -0.67
ATRX-216ENST00000624403 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.87□□□□□ -0.67
ATRX-216ENST00000624403 F8W810 466 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 CCDC188H7C350 402 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 M0QZQ0 153 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 CLDN5O00501 218 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 NRG2O14511 850 aaPredicted RBP10.86□□□□□ -0.67
ATRX-216ENST00000624403 CXCL10P02778 98 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 CYP11A1P05108 521 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 ITGB1P05556 798 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 TUBBP07437 444 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 TCF4P15884 667 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 CYP2C18P33260 490 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 GJC1P36383 396 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 RPL34P49207 117 aaKnown RBP10.86□□□□□ -0.67
ATRX-216ENST00000624403 SNX16P57768 344 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 SLC7A5Q01650 507 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 BRD3Q15059 726 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 GLE1Q53GS7 698 aaKnown RBP10.86□□□□□ -0.67
ATRX-216ENST00000624403 LRRC38Q5VT99 294 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 C1orf53Q5VUE5 145 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 TRNP1Q6NT89 227 aa10.86□□□□□ -0.67
ATRX-216ENST00000624403 WDR93Q6P2C0 686 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms