RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 M0QYV0 167 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 AP1G2O75843 785 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 LSM8O95777 96 aaKnown RBP20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 SETSIPP0DME0 302 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 HAPLN1P10915 354 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 NPR3P17342 541 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 CYP2F1P24903 491 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 CDH5P33151 784 aaPredicted RBP20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 DUSP4Q13115 394 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 PUS10Q3MIT2 529 aaKnown RBP20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 DENND1BQ6P3S1 775 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 CYP26C1Q6V0L0 522 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 VPS36Q86VN1 386 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 TCEAL8Q8IYN2 117 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 SMRP1Q8NCR6 262 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 RHOBTB2Q9BYZ6 727 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 PDCL3Q9H2J4 239 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 DPP7Q9UHL4 492 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 FBXW11Q9UKB1 542 aa20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 MTCL1Q9Y4B5 1905 aaKnown RBP20.98■□□□□ 0.95
PDLIM2-221ENST00000622702 GRXCR2A6NFK2 248 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 MBTPS2O43462 519 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 CYP1A1P04798 512 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 TNFAIP3P21580 790 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 SSTR3P32745 418 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 EIF4A3P38919 411 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 GPD2P43304 727 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 CDR1P51861 262 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 BST2Q10589 180 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 SMAD4Q13485 552 aaKnown RBP20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 TJAP1Q5JTD0 557 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 ELMSAN1Q6PJG2 1045 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 CLEC20AQ6ZU45 233 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 TMTC1Q8IUR5 882 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 TMEM139Q8IV31 216 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 KREMEN2Q8NCW0 462 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 UBA3Q8TBC4 463 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 PCDHB18PQ96TA0 734 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 BAG1Q99933 345 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 S1PR5Q9H228 398 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 PLEKHA4Q9H4M7 779 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 DMAP1Q9NPF5 467 aaPredicted RBP20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 TMEM30AQ9NV96 361 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 CEP83Q9Y592 693 aa20.97■□□□□ 0.95
PDLIM2-221ENST00000622702 SEC24AO95486 1093 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 BMP1P13497 986 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 ELF1P32519 619 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 TUFMP49411 452 aaKnown RBP20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 CACNA2D1P54289 1103 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 SLC8A3P57103 927 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 PDE4CQ08493 712 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 ASTE1Q2TB18 679 aaPredicted RBP20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 RARS2Q5T160 578 aaKnown RBP20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 RTL10Q7L3V2 364 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 LRRC8AQ8IWT6 810 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 TTC9BQ8N6N2 239 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 TMEM35BQ8NCS4 154 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 SLC30A5Q8TAD4 765 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 HDAC7Q8WUI4 952 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 SLC35F5Q8WV83 523 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 C8orf48Q96LL4 319 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 SMOQ99835 787 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 UBXN6Q9BZV1 441 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 SFXN1Q9H9B4 322 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 NHEJ1Q9H9Q4 299 aaPredicted RBP20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 CYP4F11Q9HBI6 524 aa20.96■□□□□ 0.95
PDLIM2-221ENST00000622702 TCF20Q9UGU0 1960 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 DDX3XO00571 662 aaKnown RBP eCLIP20.95■□□□□ 0.949e-11■■■■■ 33.8
PDLIM2-221ENST00000622702 XPO1O14980 1071 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 BEST1O76090 585 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 PTMAP06454 111 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 IL9P15248 144 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 NOMO3P69849 1222 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 MGAT5BQ3V5L5 792 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 TMC5Q6UXY8 1006 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 PASD1Q8IV76 773 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 WDTC1Q8N5D0 677 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 CCDC112Q8NEF3 446 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 ZMIZ2Q8NF64 920 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 STK32AQ8WU08 396 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 SECISBP2LQ93073 1101 aaKnown RBP20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 CCDC42Q96M95 316 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 PNPLA8Q9NP80 782 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 ADAMTS1Q9UHI8 967 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 FAM50BQ9Y247 325 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 SLC27A5Q9Y2P5 690 aa20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 USP15Q9Y4E8 981 aaPredicted RBP20.95■□□□□ 0.94
PDLIM2-221ENST00000622702 F8VP50 259 aa20.94■□□□□ 0.94
PDLIM2-221ENST00000622702 TRIM66O15016 1216 aa20.94■□□□□ 0.94
PDLIM2-221ENST00000622702 RFPL2O75678 378 aa20.94■□□□□ 0.94
PDLIM2-221ENST00000622702 UNGP13051 313 aaPredicted RBP20.94■□□□□ 0.94
PDLIM2-221ENST00000622702 GRIK1P39086 918 aa20.94■□□□□ 0.94
PDLIM2-221ENST00000622702 PLA2G4AP47712 749 aa20.94■□□□□ 0.94
PDLIM2-221ENST00000622702 MAP3K7CLP57077 242 aa20.94■□□□□ 0.94
PDLIM2-221ENST00000622702 RPL10AP62906 217 aaKnown RBP20.94■□□□□ 0.94
PDLIM2-221ENST00000622702 ITIH3Q06033 890 aa20.94■□□□□ 0.94
PDLIM2-221ENST00000622702 CLEC16AQ2KHT3 1053 aa20.94■□□□□ 0.94
PDLIM2-221ENST00000622702 CES5AQ6NT32 575 aa20.94■□□□□ 0.94
PDLIM2-221ENST00000622702 CCDC149Q6ZUS6 474 aa20.94■□□□□ 0.94
PDLIM2-221ENST00000622702 CCDC170Q8IYT3 715 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms