RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 IDEP14735 1019 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 GAP43P17677 238 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 LMO2P25791 158 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 ADAMTS20P59510 1910 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 MESP2Q0VG99 397 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 PMS2CLQ68D20 193 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 ANO7Q6IWH7 933 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 FAM173BQ6P4H8 233 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 TTC30AQ86WT1 665 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 SYCP3Q8IZU3 236 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 CCDC33Q8N5R6 958 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 TOP6BLQ8N6T0 577 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 OR5B17Q8NGF7 314 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 USP33Q8TEY7 942 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 CACTINQ8WUQ7 758 aaKnown RBP11.73□□□□□ -0.53
LINC00963-214ENST00000622680 KBTBD7Q8WVZ9 684 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 ZDHHC4Q9NPG8 344 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 GDAP2Q9NXN4 497 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 EBF1Q9UH73 591 aa11.73□□□□□ -0.53
LINC00963-214ENST00000622680 ACACAQ13085 2346 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 GOLGA4Q13439 2230 aaKnown RBP11.72□□□□□ -0.53
LINC00963-214ENST00000622680 C1QTNF9BB2RNN3 333 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 K7EQS6 105 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 RHOBTB1O94844 696 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 NFATC1O95644 943 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 CYP17A1P05093 508 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 C1QTNF9P0C862 333 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 HNRNPLP14866 589 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00963-214ENST00000622680 HDCP19113 662 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 SPINK2P20155 84 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 GARTP22102 1010 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 BDNFP23560 247 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 PCSK1P29120 753 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 LHX1P48742 406 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 CYP27A1Q02318 531 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 CEBPZQ03701 1054 aaKnown RBP11.72□□□□□ -0.53
LINC00963-214ENST00000622680 ZNF252P-AS1Q0IIN9 211 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 FOXC1Q12948 553 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 RRAGBQ5VZM2 374 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 ERICH6BQ5W0A0 696 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 SV2BQ7L1I2 683 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 CYP2U1Q7Z449 544 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 FSIP1Q8NA03 581 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 GLIS3Q8NEA6 775 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 MDGA1Q8NFP4 955 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 FUBP3Q96I24 572 aaKnown RBP eCLIP11.72□□□□□ -0.53
LINC00963-214ENST00000622680 OLFML3Q9NRN5 406 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 SMPD4Q9NXE4 827 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 CCDC39Q9UFE4 941 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 ARHGAP26Q9UNA1 814 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 NME7Q9Y5B8 376 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 LAMA5O15230 3695 aa11.72□□□□□ -0.53
LINC00963-214ENST00000622680 CABIN1Q9Y6J0 2220 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 ATXN2Q99700 1313 aaKnown RBP11.71□□□□□ -0.53
LINC00963-214ENST00000622680 LOC400499M0QZD8 3231 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 FRMD3A2A2Y4 597 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 LEFTY2O00292 366 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 TOP3BO95985 862 aaKnown RBP11.71□□□□□ -0.53
LINC00963-214ENST00000622680 LDHAP00338 332 aaKnown RBP11.71□□□□□ -0.53
LINC00963-214ENST00000622680 GRIK1P39086 918 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 MAGEA11P43364 429 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 DHPSP49366 369 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-214ENST00000622680 RBP5P82980 135 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 KDSRQ06136 332 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 IFRD2Q12894 506 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-214ENST00000622680 NR1H3Q13133 447 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 MDH1BQ5I0G3 518 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 SH3PXD2AQ5TCZ1 1133 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 FAM171BQ6P995 826 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 TMEM92Q6UXU6 159 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 C4orf50Q6ZRC1 276 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 DENND5BQ6ZUT9 1274 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 ARMCX6Q7L4S7 300 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 FILIP1Q7Z7B0 1213 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 RASSF3Q86WH2 238 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 C12orf40Q86WS4 652 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 CBWD2Q8IUF1 395 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 GPD1LQ8N335 351 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 ALLCQ8N6M5 410 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 SPATA18Q8TC71 538 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 HPS3Q969F9 1004 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 EXOC4Q96A65 974 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 HPDLQ96IR7 371 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 ANKRD36BP1Q96IX9 119 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 PANK2Q9BZ23 570 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 TMEM30AQ9NV96 361 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 INTS13Q9NVM9 706 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 MAGEC2Q9UBF1 373 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-214ENST00000622680 CIZ1Q9ULV3 898 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-214ENST00000622680 MMP17Q9ULZ9 603 aa11.71□□□□□ -0.53
LINC00963-214ENST00000622680 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.71□□□□□ -0.53
LINC00963-214ENST00000622680 F8VP50 259 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 KLF8O95600 359 aaPredicted RBP11.7□□□□□ -0.54
LINC00963-214ENST00000622680 ABL1P00519 1130 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 PDGFRBP09619 1106 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 TCF3P15923 654 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 ANXA13P27216 316 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 TXLNAP40222 546 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 STAT6P42226 847 aa11.7□□□□□ -0.54
LINC00963-214ENST00000622680 SLC6A11P48066 632 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms