RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 TNFRSF8P28908 595 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 CHRNA3P32297 505 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 PLA2G4AP47712 749 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 ZNF143P52747 638 aaPredicted RBP22.54■■□□□ 1.2
SPAST-204ENST00000621856 CD300LGQ6UXG3 332 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 ZDHHC14Q8IZN3 488 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 ABI1Q8IZP0 508 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 APBB2Q92870 758 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 FAM193BQ96PV7 902 aaPredicted RBP22.54■■□□□ 1.2
SPAST-204ENST00000621856 CNPY3Q9BT09 278 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 B3GNT5Q9BYG0 378 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 OSBPL8Q9BZF1 889 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 HIPK3Q9H422 1215 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 ZWILCHQ9H900 591 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 SLTMQ9NWH9 1034 aaKnown RBP eCLIP22.54■■□□□ 1.2
SPAST-204ENST00000621856 PCDHB7Q9Y5E2 793 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 C2CD4BA6NLJ0 364 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 CAPN15O75808 1086 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 DDHD2O94830 711 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 CYP11A1P05108 521 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 FAM200BP0CF97 657 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 TNNT3P45378 269 aaPredicted RBP22.54■■□□□ 1.2
SPAST-204ENST00000621856 DR1Q01658 176 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 SIX1Q15475 284 aaPredicted RBP22.54■■□□□ 1.2
SPAST-204ENST00000621856 TXNRD3NBQ6F5E7 133 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 ZNF280BQ86YH2 543 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 IFT81Q8WYA0 676 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 SCLYQ96I15 445 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 HEMGNQ9BXL5 484 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 CRISPLD2Q9H0B8 497 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 ELAC1Q9H777 363 aaKnown RBP22.54■■□□□ 1.2
SPAST-204ENST00000621856 LRFN2Q9ULH4 789 aa22.54■■□□□ 1.2
SPAST-204ENST00000621856 SCN5AQ14524 2016 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 ESYT3A0FGR9 886 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 M0QZQ0 153 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 ATP8B1O43520 1251 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 KRT7P08729 469 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 FLT3P36888 993 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 CDR1P51861 262 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 CCL23P55773 120 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 PLCB3Q01970 1234 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 DHX34Q14147 1143 aaKnown RBP22.53■■□□□ 1.2
SPAST-204ENST00000621856 PAQR9Q6ZVX9 377 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 ANKRD33Q7Z3H0 272 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 POLNQ7Z5Q5 900 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 PIGZQ86VD9 579 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 ARFGAP1Q8N6T3 406 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 CASKIN2Q8WXE0 1202 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 ACSF2Q96CM8 615 aaPredicted RBP22.53■■□□□ 1.2
SPAST-204ENST00000621856 SUSD3Q96L08 255 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 SLITRK1Q96PX8 696 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 PPP1R12CQ9BZL4 782 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 KRT82Q9NSB4 513 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 TBC1D13Q9NVG8 400 aa22.53■■□□□ 1.2
SPAST-204ENST00000621856 MYBPHLA2RUH7 354 aa22.52■■□□□ 1.2
SPAST-204ENST00000621856 B4GALT3O60512 393 aa22.52■■□□□ 1.2
SPAST-204ENST00000621856 ITGB1P05556 798 aa22.52■■□□□ 1.2
SPAST-204ENST00000621856 DESP17661 470 aa22.52■■□□□ 1.2
SPAST-204ENST00000621856 OR1G1P47890 313 aa22.52■■□□□ 1.2
SPAST-204ENST00000621856 RPL34P49207 117 aaKnown RBP22.52■■□□□ 1.2
SPAST-204ENST00000621856 SLC25A11Q02978 314 aaKnown RBP22.52■■□□□ 1.2
SPAST-204ENST00000621856 DSC1Q08554 894 aa22.52■■□□□ 1.2
SPAST-204ENST00000621856 TAF5Q15542 800 aa22.52■■□□□ 1.2
SPAST-204ENST00000621856 CYP1B1Q16678 543 aa22.52■■□□□ 1.2
SPAST-204ENST00000621856 TRIM60Q495X7 471 aa22.52■■□□□ 1.2
SPAST-204ENST00000621856 TRNP1Q6NT89 227 aa22.52■■□□□ 1.2
SPAST-204ENST00000621856 FAM35AQ86V20 835 aa22.52■■□□□ 1.2
SPAST-204ENST00000621856 RUNDC3BQ96NL0 473 aa22.52■■□□□ 1.2
SPAST-204ENST00000621856 LRRD1A4D1F6 860 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 FAM187AA6NFU0 413 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 F8W810 466 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 MIPP30301 263 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 CARSP49589 748 aaKnown RBP22.51■■□□□ 1.19
SPAST-204ENST00000621856 MNX1P50219 401 aaPredicted RBP22.51■■□□□ 1.19
SPAST-204ENST00000621856 TLE2Q04725 743 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 CCDC137Q6PK04 289 aaKnown RBP22.51■■□□□ 1.19
SPAST-204ENST00000621856 SPOCD1Q6ZMY3 1216 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 FAM43BQ6ZT52 329 aaPredicted RBP22.51■■□□□ 1.19
SPAST-204ENST00000621856 HDXQ7Z353 690 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 CTU1Q7Z7A3 348 aaKnown RBP22.51■■□□□ 1.19
SPAST-204ENST00000621856 COLGALT2Q8IYK4 626 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 THEM5Q8N1Q8 247 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 MYCBPAPQ8TBZ2 947 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 CLEC4CQ8WTT0 213 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 PCED1BQ96HM7 432 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 HERPUD2Q9BSE4 406 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 FUT8Q9BYC5 575 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 PCSK1NQ9UHG2 260 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 RASAL2Q9UJF2 1139 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 UTP11Q9Y3A2 253 aaKnown RBP22.51■■□□□ 1.19
SPAST-204ENST00000621856 DPYSL4O14531 572 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 AP1G2O75843 785 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 SDC4P31431 198 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 SCNN1AP37088 669 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 COILP38432 576 aaPredicted RBP22.51■■□□□ 1.19
SPAST-204ENST00000621856 MAP3K7CLP57077 242 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 COPS2P61201 443 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 ADIGQ0VDE8 80 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 FAAP100Q0VG06 881 aa22.51■■□□□ 1.19
SPAST-204ENST00000621856 CDO1Q16878 200 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms