RNA–Protein interactions for RNA: ENST00000620631.4

GTF2I-217, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-217ENST00000620631 SMC5Q8IY18 1101 aa6.54□□□□□ -1.36
GTF2I-217ENST00000620631 SCYL3Q8IZE3 742 aa6.54□□□□□ -1.36
GTF2I-217ENST00000620631 FAM43AQ8N2R8 423 aa6.54□□□□□ -1.36
GTF2I-217ENST00000620631 MSL3Q8N5Y2 521 aaKnown RBP6.54□□□□□ -1.36
GTF2I-217ENST00000620631 KBTBD3Q8NAB2 608 aa6.54□□□□□ -1.36
GTF2I-217ENST00000620631 SEC62Q99442 399 aaKnown RBP6.54□□□□□ -1.36
GTF2I-217ENST00000620631 CRNKL1Q9BZJ0 848 aaKnown RBP6.54□□□□□ -1.36
GTF2I-217ENST00000620631 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.54□□□□□ -1.363e-8■■■□□ 15
GTF2I-217ENST00000620631 PUS7LQ9H0K6 701 aaKnown RBP6.54□□□□□ -1.36
GTF2I-217ENST00000620631 VTA1Q9NP79 307 aa6.54□□□□□ -1.36
GTF2I-217ENST00000620631 MCM9Q9NXL9 1143 aa6.54□□□□□ -1.36
GTF2I-217ENST00000620631 ZNF112Q9UJU3 913 aa6.54□□□□□ -1.36
GTF2I-217ENST00000620631 NAV1Q8NEY1 1877 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 TTC41PQ6P2S7 1318 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 GOLGA8AA7E2F4 631 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 ERC2O15083 957 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 RNF113AO15541 343 aaKnown RBP6.53□□□□□ -1.36
GTF2I-217ENST00000620631 HLA-DOAP06340 250 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 NCLP19338 710 aaKnown RBP6.53□□□□□ -1.36
GTF2I-217ENST00000620631 TM4SF4P48230 202 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 PLCD1P51178 756 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 PPIL2Q13356 520 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 NAIF1Q69YI7 327 aaPredicted RBP6.53□□□□□ -1.36
GTF2I-217ENST00000620631 GADL1Q6ZQY3 521 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 ERO1BQ86YB8 467 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 VRK3Q8IV63 474 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 RPUSD2Q8IZ73 545 aaKnown RBP6.53□□□□□ -1.36
GTF2I-217ENST00000620631 SLC44A5Q8NCS7 719 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 DYNLL2Q96FJ2 89 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 FAM126AQ9BYI3 521 aaPredicted RBP6.53□□□□□ -1.36
GTF2I-217ENST00000620631 TRPM5Q9NZQ8 1165 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 MCM8Q9UJA3 840 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.53□□□□□ -1.36
GTF2I-217ENST00000620631 SLC4A4Q9Y6R1 1079 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 ZHX2Q9Y6X8 837 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 DDX60LQ5H9U9 1706 aaKnown RBP6.53□□□□□ -1.36
GTF2I-217ENST00000620631 COL2A1P02458 1487 aaPredicted RBP6.53□□□□□ -1.36
GTF2I-217ENST00000620631 FOCADQ5VW36 1801 aa6.53□□□□□ -1.36
GTF2I-217ENST00000620631 DOCK1Q14185 1865 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 ANKRD62A6NC57 917 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 BTBD19C9JJ37 291 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 GPAA1O43292 621 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 CA12O43570 354 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 PPFIA4O75335 1185 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 PRKD3O94806 890 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 GH2P01242 217 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 ITGB1P05556 798 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 MTHFD2P13995 350 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 LAG3P18627 525 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 SNAPC2Q13487 334 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 ZSCAN25Q6NSZ9 544 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 KCNK18Q7Z418 384 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 ATL2Q8NHH9 583 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 SNX33Q8WV41 574 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 RILPL2Q969X0 211 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 LENG9Q96B70 501 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 AHCYL2Q96HN2 611 aaKnown RBP6.52□□□□□ -1.37
GTF2I-217ENST00000620631 FAM227BQ96M60 508 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 AGAP2Q99490 1192 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 PDCD2LQ9BRP1 358 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 NDC1Q9BTX1 674 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 KCNH6Q9H252 994 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 DHX36Q9H2U1 1008 aaKnown RBP6.52□□□□□ -1.37
GTF2I-217ENST00000620631 SAGE1Q9NXZ1 904 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 PI4KBQ9UBF8 816 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 STAP2Q9UGK3 403 aa6.52□□□□□ -1.37
GTF2I-217ENST00000620631 MYH7P12883 1935 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 A0A0D9SFI3 127 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 PDHXO00330 501 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 MPHOSPH10O00566 681 aaKnown RBP6.51□□□□□ -1.37
GTF2I-217ENST00000620631 TRIM24O15164 1050 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 CTNND1O60716 968 aaKnown RBP6.51□□□□□ -1.37
GTF2I-217ENST00000620631 TMEM127O75204 238 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 CETPP11597 493 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 APOBEC3AP31941 199 aaPredicted RBP6.51□□□□□ -1.37
GTF2I-217ENST00000620631 SHMT1P34896 483 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 ERVK-21P61565 698 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 PPATQ06203 517 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 SPP2Q13103 211 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 ANO4Q32M45 955 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 TREML2Q5T2D2 321 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 GJC2Q5T442 439 aaPredicted RBP6.51□□□□□ -1.37
GTF2I-217ENST00000620631 MBNL2Q5VZF2 373 aaKnown RBP6.51□□□□□ -1.37
GTF2I-217ENST00000620631 NECAB2Q7Z6G3 386 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 DDX42Q86XP3 938 aaKnown RBP eCLIP6.51□□□□□ -1.37
GTF2I-217ENST00000620631 CMIPQ8IY22 773 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 OR52N2Q8NGI0 321 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 AUTS2Q8WXX7 1259 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 STRBPQ96SI9 672 aaKnown RBP6.51□□□□□ -1.37
GTF2I-217ENST00000620631 MLST8Q9BVC4 326 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 LSM14BQ9BX40 385 aaKnown RBP6.51□□□□□ -1.37
GTF2I-217ENST00000620631 CPEB1Q9BZB8 566 aaKnown RBP6.51□□□□□ -1.37
GTF2I-217ENST00000620631 ZNF768Q9H5H4 540 aaKnown RBP6.51□□□□□ -1.37
GTF2I-217ENST00000620631 DPP7Q9UHL4 492 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 HERC5Q9UII4 1024 aaKnown RBP6.51□□□□□ -1.37
GTF2I-217ENST00000620631 SERPINB13Q9UIV8 391 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 ZBTB21Q9ULJ3 1066 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 CLCA2Q9UQC9 943 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 AFG3L2Q9Y4W6 797 aa6.51□□□□□ -1.37
GTF2I-217ENST00000620631 CASP8AP2Q9UKL3 1982 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms