RNA–Protein interactions for RNA: ENST00000620631.4

GTF2I-217, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-217ENST00000620631 AEBP2Q6ZN18 517 aaPredicted RBP29.81■■■□□ 2.36
GTF2I-217ENST00000620631 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
GTF2I-217ENST00000620631 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
GTF2I-217ENST00000620631 PHF23Q9BUL5 403 aaPredicted RBP25.2■■□□□ 1.62
GTF2I-217ENST00000620631 FOXD1Q16676 465 aa23.63■■□□□ 1.37
GTF2I-217ENST00000620631 PLPPR3Q6T4P5 718 aa23.19■■□□□ 1.3
GTF2I-217ENST00000620631 ADRA2BP18089 450 aa22.42■■□□□ 1.18
GTF2I-217ENST00000620631 PPP6R1Q9UPN7 881 aa22.41■■□□□ 1.18
GTF2I-217ENST00000620631 PIAS4Q8N2W9 510 aaPredicted RBP22.25■■□□□ 1.15
GTF2I-217ENST00000620631 MSH5O43196 834 aa21.99■■□□□ 1.11
GTF2I-217ENST00000620631 POTEDQ86YR6 584 aa20.75■□□□□ 0.91
GTF2I-217ENST00000620631 SCAF1Q9H7N4 1312 aaKnown RBP20.56■□□□□ 0.88
GTF2I-217ENST00000620631 MAPK8IP2Q13387 824 aaPredicted RBP20.47■□□□□ 0.87
GTF2I-217ENST00000620631 PPP4R3CPQ6ZMV5 832 aa20.39■□□□□ 0.85
GTF2I-217ENST00000620631 DMRT2Q9Y5R5 561 aa20.19■□□□□ 0.82
GTF2I-217ENST00000620631 CNKSR2Q8WXI2 1034 aa19.9■□□□□ 0.78
GTF2I-217ENST00000620631 NCBP3Q53F19 620 aaKnown RBP19.79■□□□□ 0.76
GTF2I-217ENST00000620631 RNF216Q9NWF9 866 aaPredicted RBP19.59■□□□□ 0.73
GTF2I-217ENST00000620631 HOXD11P31277 338 aaPredicted RBP19.58■□□□□ 0.72
GTF2I-217ENST00000620631 DCAF8L1A6NGE4 600 aa19.56■□□□□ 0.72
GTF2I-217ENST00000620631 KCNA4P22459 653 aa19.42■□□□□ 0.7
GTF2I-217ENST00000620631 NPM3O75607 178 aaKnown RBP19.41■□□□□ 0.7
GTF2I-217ENST00000620631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.83■□□□□ 0.64e-7■■■□□ 17.2
GTF2I-217ENST00000620631 DNAJC5BQ9UF47 199 aa18.77■□□□□ 0.6
GTF2I-217ENST00000620631 RNF39Q9H2S5 420 aa18.75■□□□□ 0.59
GTF2I-217ENST00000620631 CACNB1Q02641 598 aaPredicted RBP18.71■□□□□ 0.59
GTF2I-217ENST00000620631 C1QBPQ07021 282 aaKnown RBP18.54■□□□□ 0.56
GTF2I-217ENST00000620631 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
GTF2I-217ENST00000620631 SLC4A2P04920 1241 aa18.4■□□□□ 0.54
GTF2I-217ENST00000620631 U3KPZ7 1027 aaPredicted RBP18.34■□□□□ 0.53
GTF2I-217ENST00000620631 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.04■□□□□ 0.48
GTF2I-217ENST00000620631 CAPN15O75808 1086 aa18.04■□□□□ 0.48
GTF2I-217ENST00000620631 HNRNPUL2Q1KMD3 747 aaKnown RBP18.04■□□□□ 0.48
GTF2I-217ENST00000620631 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
GTF2I-217ENST00000620631 FOXD4L1Q9NU39 408 aa17.99■□□□□ 0.47
GTF2I-217ENST00000620631 APLP2Q06481 763 aa17.98■□□□□ 0.47
GTF2I-217ENST00000620631 MYCNP04198 464 aaPredicted RBP17.97■□□□□ 0.47
GTF2I-217ENST00000620631 SAMD1Q6SPF0 538 aaPredicted RBP17.95■□□□□ 0.46
GTF2I-217ENST00000620631 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
GTF2I-217ENST00000620631 ZBTB22O15209 634 aa17.79■□□□□ 0.44
GTF2I-217ENST00000620631 ZNF219Q9P2Y4 722 aaPredicted RBP17.76■□□□□ 0.43
GTF2I-217ENST00000620631 DSG3P32926 999 aa17.72■□□□□ 0.43
GTF2I-217ENST00000620631 ABCB7O75027 752 aa17.63■□□□□ 0.41
GTF2I-217ENST00000620631 EHMT2Q96KQ7 1210 aa17.5■□□□□ 0.39
GTF2I-217ENST00000620631 ATF5Q9Y2D1 282 aaPredicted RBP17.49■□□□□ 0.39
GTF2I-217ENST00000620631 POLA2Q14181 598 aa17.43■□□□□ 0.38
GTF2I-217ENST00000620631 CSRNP3Q8WYN3 585 aa17.39■□□□□ 0.37
GTF2I-217ENST00000620631 ATXN8OSP0DMR3 200 aa17.38■□□□□ 0.37
GTF2I-217ENST00000620631 ZBTB12Q9Y330 459 aaPredicted RBP17.08■□□□□ 0.32
GTF2I-217ENST00000620631 RBM42Q9BTD8 480 aaKnown RBP16.95■□□□□ 0.3
GTF2I-217ENST00000620631 FBLN2P98095 1184 aa16.9■□□□□ 0.3
GTF2I-217ENST00000620631 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
GTF2I-217ENST00000620631 MKRN4PQ13434 485 aaPredicted RBP16.68■□□□□ 0.26
GTF2I-217ENST00000620631 AKT1S1Q96B36 256 aa16.63■□□□□ 0.25
GTF2I-217ENST00000620631 SPDYE2BA6NHP3 402 aa16.56■□□□□ 0.24
GTF2I-217ENST00000620631 SPDYE6P0CI01 402 aa16.56■□□□□ 0.24
GTF2I-217ENST00000620631 SPDYE2Q495Y8 402 aa16.56■□□□□ 0.24
GTF2I-217ENST00000620631 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
GTF2I-217ENST00000620631 REM2Q8IYK8 340 aaPredicted RBP16.48■□□□□ 0.23
GTF2I-217ENST00000620631 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
GTF2I-217ENST00000620631 POTEHQ6S545 545 aa16.37■□□□□ 0.21
GTF2I-217ENST00000620631 SSUH2Q9Y2M2 353 aa16.32■□□□□ 0.2
GTF2I-217ENST00000620631 PITPNM1O00562 1244 aa16.28■□□□□ 0.2
GTF2I-217ENST00000620631 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
GTF2I-217ENST00000620631 CLEC11AQ9Y240 323 aa16.25■□□□□ 0.19
GTF2I-217ENST00000620631 SPDYE1Q8NFV5 336 aaPredicted RBP16.22■□□□□ 0.19
GTF2I-217ENST00000620631 SPDYE4A6NLX3 237 aa16.2■□□□□ 0.18
GTF2I-217ENST00000620631 PIP4P2Q8N4L2 257 aa16.09■□□□□ 0.17
GTF2I-217ENST00000620631 FXR2P51116 673 aaKnown RBP eCLIP16.03■□□□□ 0.16
GTF2I-217ENST00000620631 PRR29P0C7W0 189 aa16.01■□□□□ 0.15
GTF2I-217ENST00000620631 PRKAR2AP13861 404 aaKnown RBP15.92■□□□□ 0.14
GTF2I-217ENST00000620631 STAG3Q9UJ98 1225 aa15.9■□□□□ 0.14
GTF2I-217ENST00000620631 FKBP8Q14318 412 aa15.83■□□□□ 0.12
GTF2I-217ENST00000620631 CHADLQ6NUI6 762 aa15.83■□□□□ 0.12
GTF2I-217ENST00000620631 HAX1O00165 279 aa15.8■□□□□ 0.12
GTF2I-217ENST00000620631 PROM2Q8N271 834 aa15.7■□□□□ 0.1
GTF2I-217ENST00000620631 FARP1Q9Y4F1 1045 aaPredicted RBP15.61■□□□□ 0.09
GTF2I-217ENST00000620631 CREBZFQ9NS37 354 aa15.6■□□□□ 0.09
GTF2I-217ENST00000620631 SP7Q8TDD2 431 aaPredicted RBP15.53■□□□□ 0.08
GTF2I-217ENST00000620631 EVX2Q03828 476 aa15.51■□□□□ 0.07
GTF2I-217ENST00000620631 C19orf67A6NJJ6 358 aa15.5■□□□□ 0.07
GTF2I-217ENST00000620631 MIER1Q8N108 512 aa15.49■□□□□ 0.07
GTF2I-217ENST00000620631 PLEKHG5O94827 1062 aa15.47■□□□□ 0.07
GTF2I-217ENST00000620631 CD44P16070 742 aaKnown RBP15.44■□□□□ 0.06
GTF2I-217ENST00000620631 NPM1P06748 294 aaKnown RBP eCLIP15.43■□□□□ 0.06
GTF2I-217ENST00000620631 PLCD3Q8N3E9 789 aa15.42■□□□□ 0.06
GTF2I-217ENST00000620631 FBXO3Q9UK99 471 aa15.39■□□□□ 0.05
GTF2I-217ENST00000620631 MNX1P50219 401 aaPredicted RBP15.32■□□□□ 0.04
GTF2I-217ENST00000620631 PAK3O75914 559 aaPredicted RBP15.31■□□□□ 0.04
GTF2I-217ENST00000620631 ZRANB1Q9UGI0 708 aa15.31■□□□□ 0.04
GTF2I-217ENST00000620631 GABBR2O75899 941 aa15.22■□□□□ 0.03
GTF2I-217ENST00000620631 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
GTF2I-217ENST00000620631 TSPYL2Q9H2G4 693 aaPredicted RBP15.19■□□□□ 0.02
GTF2I-217ENST00000620631 VASPP50552 380 aaPredicted RBP15.14■□□□□ 0.01
GTF2I-217ENST00000620631 ZNF579Q8NAF0 562 aaKnown RBP15.14■□□□□ 0.01
GTF2I-217ENST00000620631 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
GTF2I-217ENST00000620631 CLCN6P51797 869 aa15.1■□□□□ 0.01
GTF2I-217ENST00000620631 PHF12Q96QT6 1004 aa15.09■□□□□ 0.01
GTF2I-217ENST00000620631 RASEFQ8IZ41 740 aa15.05■□□□□ -0
GTF2I-217ENST00000620631 NUBP1P53384 320 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms