RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 DNAJC24Q6P3W2 148 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 KBTBD2Q8IY47 623 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 ZFAND2BQ8WV99 257 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 ACSF2Q96CM8 615 aaPredicted RBP13.69□□□□□ -0.22
SKP2-209ENST00000620197 SH3GL3Q99963 347 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 TSSK1BQ9BXA7 367 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 TRIM55Q9BYV6 548 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 DNAJC5Q9H3Z4 198 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 SAE1Q9UBE0 346 aaPredicted RBP13.69□□□□□ -0.22
SKP2-209ENST00000620197 STOML1Q9UBI4 398 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 TTLL3Q9Y4R7 772 aa13.69□□□□□ -0.22
SKP2-209ENST00000620197 APOC4-APOC2K7ER74 178 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 APOC2P02655 101 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 SUPT20HL2P0C7V6 817 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 MYCLP12524 364 aaPredicted RBP13.68□□□□□ -0.22
SKP2-209ENST00000620197 PSMC4P43686 418 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 MRPS5P82675 430 aaKnown RBP13.68□□□□□ -0.22
SKP2-209ENST00000620197 SUPT20HL1Q3ZLR7 823 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 XKR3Q5GH77 459 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 ARHGEF16Q5VV41 709 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 ZBTB10Q96DT7 871 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 FBXO6Q9NRD1 293 aaPredicted RBP13.68□□□□□ -0.22
SKP2-209ENST00000620197 SIRPGQ9P1W8 387 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 TRPC5Q9UL62 973 aaPredicted RBP13.68□□□□□ -0.22
SKP2-209ENST00000620197 PTPRFP10586 1907 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 PLXNA1Q9UIW2 1896 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 KLHL33A6NCF5 533 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 SNNO75324 88 aaPredicted RBP13.68□□□□□ -0.22
SKP2-209ENST00000620197 STAM2O75886 525 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 HAUS5O94927 633 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 PRKCHP24723 683 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 SERPINB3P29508 390 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 RFC1P35251 1148 aaPredicted RBP13.68□□□□□ -0.22
SKP2-209ENST00000620197 MAGEA3P43357 314 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 SP2Q02086 613 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 OVGP1Q12889 678 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 KPNB1Q14974 876 aaKnown RBP13.68□□□□□ -0.22
SKP2-209ENST00000620197 PTPN20Q4JDL3 420 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 TRIM68Q6AZZ1 485 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 RHPN2Q8IUC4 686 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 FLAD1Q8NFF5 587 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 AZIN2Q96A70 460 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 OXNAD1Q96HP4 312 aaPredicted RBP13.68□□□□□ -0.22
SKP2-209ENST00000620197 SYNCQ9H7C4 482 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 TESPA1A2RU30 521 aaPredicted RBP13.68□□□□□ -0.22
SKP2-209ENST00000620197 TTLL13PA6NNM8 815 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 KRT36O76013 467 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 CD48P09326 243 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 BRD2P25440 801 aaKnown RBP13.68□□□□□ -0.22
SKP2-209ENST00000620197 OAZ1P54368 228 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 KLC1Q07866 573 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 DPYSL3Q14195 570 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 SNX30Q5VWJ9 437 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 CDHR3Q6ZTQ4 885 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 TMEM35BQ8NCS4 154 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 UCMAQ8WVF2 138 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 CISHQ9NSE2 258 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.68□□□□□ -0.22
SKP2-209ENST00000620197 SLC9A2Q9UBY0 812 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 ZNF212Q9UDV6 495 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 DNAJB4Q9UDY4 337 aa13.68□□□□□ -0.22
SKP2-209ENST00000620197 LRRD1A4D1F6 860 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 GOLGA8SH3BPF8 625 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 GOLGA8MH3BSY2 632 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 GJC1P36383 396 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 ZPBP2Q6X784 338 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 LRRC74BQ6ZQY2 392 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 JOSD2Q8TAC2 188 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 HAUS1Q96CS2 278 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 BICD1Q96G01 975 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 CYTH2Q99418 400 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 C10orf88Q9H8K7 445 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 KCNK4Q9NYG8 393 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 FBXO40Q9UH90 709 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 SEPT9Q9UHD8 586 aaPredicted RBP13.67□□□□□ -0.22
SKP2-209ENST00000620197 MSCO60682 206 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 SPAG6O75602 509 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 PIAS1O75925 651 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 PROZP22891 400 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 CHRNA5P30532 468 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 ICAM3P32942 547 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 BAATQ14032 418 aaPredicted RBP13.67□□□□□ -0.22
SKP2-209ENST00000620197 RCN1Q15293 331 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 MYLK4Q86YV6 388 aaPredicted RBP13.67□□□□□ -0.22
SKP2-209ENST00000620197 RAB3IL1Q8TBN0 382 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 CCDC106Q9BWC9 280 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 BCO2Q9BYV7 579 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 PIDD1Q9HB75 910 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 USP29Q9HBJ7 922 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 HOMER2Q9NSB8 354 aa13.67□□□□□ -0.22
SKP2-209ENST00000620197 XPO7Q9UIA9 1087 aaKnown RBP13.67□□□□□ -0.22
SKP2-209ENST00000620197 BRCA1P38398 1863 aaKnown RBP13.67□□□□□ -0.22
SKP2-209ENST00000620197 CHADO15335 359 aa13.66□□□□□ -0.22
SKP2-209ENST00000620197 GSRP00390 522 aa13.66□□□□□ -0.22
SKP2-209ENST00000620197 KRT7P08729 469 aa13.66□□□□□ -0.22
SKP2-209ENST00000620197 ARFIP2P53365 341 aa13.66□□□□□ -0.22
SKP2-209ENST00000620197 GPAT2Q6NUI2 795 aa13.66□□□□□ -0.22
SKP2-209ENST00000620197 TTC7BQ86TV6 843 aa13.66□□□□□ -0.22
SKP2-209ENST00000620197 XYLT1Q86Y38 959 aa13.66□□□□□ -0.22
SKP2-209ENST00000620197 LMNTD2Q8IXW0 634 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms